Prnd (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 139,666,383 - 139,671,647 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 119,213,462 - 119,218,742 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 119,213,429 - 119,218,745 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 123,119,473 - 123,120,009 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 131,706,452 - 131,706,988 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 129,375,579 - 129,376,115 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 124,543,227 - 124,548,548 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 124,545,364 - 124,545,900 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 131,037,286 - 131,042,599 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 119,705,556 - 119,706,092 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 119,611,116 - 119,614,313 (+) | NCBI | | | | | Celera | 3 | 118,015,315 - 118,015,851 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q36 | NCBI | | | | |
|
PRND (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 20 | 4,721,909 - 4,728,460 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 4,721,909 - 4,728,460 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 4,702,555 - 4,709,106 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 4,650,556 - 4,657,106 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 4,650,555 - 4,657,105 | NCBI | | | | | Celera | 20 | 4,772,270 - 4,778,820 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | p13 | NCBI | | | | | HuRef | 20 | 4,655,992 - 4,662,539 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 4,703,313 - 4,709,861 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 4,761,119 - 4,767,678 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Prnd (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 131,792,781 - 131,798,051 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 131,792,781 - 131,798,050 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 131,950,861 - 131,956,131 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 131,950,861 - 131,956,130 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 131,776,597 - 131,781,866 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 131,642,303 - 131,647,571 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 133,176,508 - 133,181,776 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | F2 | NCBI | | | | | cM Map | 2 | 64.07 | NCBI | | | | |
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Prnd (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955415 | 15,469,500 - 15,474,817 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955415 | 15,469,500 - 15,474,817 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PRND (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 21 | 5,676,641 - 5,683,171 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 5,673,465 - 5,679,995 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 4,749,111 - 4,755,647 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 4,545,862 - 4,552,299 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 4,548,403 - 4,548,933 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
PRND (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 24 | 16,822,807 - 16,828,473 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 16,825,655 - 16,826,191 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 16,646,668 - 16,652,340 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 17,240,937 - 17,246,604 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 17,242,072 - 17,246,495 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 16,835,284 - 16,840,950 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 16,941,594 - 16,947,248 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 17,275,205 - 17,280,878 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Prnd (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 165,648,796 - 165,649,882 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936485 | 14,080,770 - 14,083,069 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936485 | 14,079,691 - 14,081,246 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PRND (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 17 | 13,729,731 - 13,735,483 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 13,729,715 - 13,735,485 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 14,626,201 - 14,632,002 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PRND (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 33,344,375 - 33,349,089 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 33,344,808 - 33,345,338 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666071 | 11,185,986 - 11,189,339 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Prnd (Heterocephalus glaber - naked mole-rat) |
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