Postn (periostin) - Rat Genome Database

Name: Postn
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Postn (periostin) Rattus norvegicus

Analyze

Symbol:

Postn

Name:

periostin

RGD ID:

1305285

Description:

Predicted to enable cell adhesion molecule binding activity; heparin binding activity; and metal ion binding activity. Involved in several processes, including bone regeneration; negative regulation of cell-substrate adhesion; and positive regulation of chemokine (C-X-C motif) ligand 2 production. Located in extracellular space and neuromuscular junction. Used to study congestive heart failure. Biomarker of artery disease (multiple); degenerative disc disease; end stage renal disease; periodontitis; and tendinitis. Orthologous to human POSTN (periostin); INTERACTS WITH (-)-anisomycin; 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC361945; periostin, osteoblast specific factor; periostin-like factor; Plf

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	POSTN (periostin)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Postn (periostin, osteoblast specific factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Postn (periostin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	POSTN (periostin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	POSTN (periostin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Postn (periostin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	POSTN (periostin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	POSTN (periostin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Postn (periostin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	POSTN (periostin)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Postn (periostin, osteoblast specific factor)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	postna (periostin, osteoblast specific factor a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	postnb (periostin, osteoblast specific factor b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F26E4.7	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	mfas	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoInspector)
Saccharomyces cerevisiae (baker's yeast):	YLR001C	Alliance	DIOPT (Hieranoid\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	postn	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	138,527,714 - 138,559,098 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	138,527,696 - 138,559,099 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	145,095,839 - 145,127,099 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	2	143,207,896 - 143,239,160 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	2	137,839,726 - 137,870,988 (+)	NCBI	Rnor_WKY
Rnor_6.0	2	143,656,820 - 143,688,087 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	143,656,793 - 143,688,087 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	163,331,229 - 163,362,444 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	143,537,099 - 143,568,341 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	143,487,061 - 143,518,300 (+)	NCBI
Celera	2	133,010,117 - 133,041,246 (+)	NCBI		Celera
Cytogenetic Map	2	q26	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

abdominal aortic aneurysm (ISO)

aggressive periodontitis (ISS)

aspirin-induced respiratory disease (ISO)

bone structure disease (ISS)

bronchopulmonary dysplasia (ISO)

Cardiomegaly (IEP)

Carotid Artery Injuries (IEP)

chronic kidney disease (ISO)

Colorectal Neoplasms (ISO)

congestive heart failure (IMP,ISO)

Craniocerebral Trauma (IEP)

Cumulative Trauma Disorders (IEP)

degenerative disc disease (IEP,ISO)

Diabetic Nephropathies (ISO)

drug allergy (ISO)

Duchenne muscular dystrophy (ISO)

end stage renal disease (IEP)

Femoral Fractures (IEP)

genetic disease (ISO)

hypertension (IEP)

Hypertensive Nephropathy (IEP)

liver cirrhosis (ISO)

myocardial infarction (IEP)

periodontitis (IEP)

tendinitis (IEP)

Tendon Injuries (IEP)

ureteral obstruction (ISO)

Ventricular Dysfunction (IDA)

Viral Bronchiolitis (ISO)

Wounds and Injuries (IEP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-anisomycin (EXP)

(1->4)-beta-D-glucan (ISO)

1,1-dichloroethene (ISO)

1-naphthyl isothiocyanate (EXP)

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (EXP)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-methylcholanthrene (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acids (EXP)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

calcium dichloride (ISO)

choline (ISO)

cisplatin (ISO)

cobalt dichloride (EXP)

copper atom (EXP,ISO)

copper(0) (EXP,ISO)

curcumin (ISO)

Curcumol (ISO)

cyclophosphamide (ISO)

cytarabine (ISO)

decabromodiphenyl ether (EXP)

dexamethasone (ISO)

dextran sulfate (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

dioxygen (ISO)

disulfiram (ISO)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (EXP,ISO)

elemental selenium (ISO)

entinostat (ISO)

ethanol (ISO)

etoposide (ISO)

fenvalerate (EXP)

fluorescein 5-isothiocyanate (ISO)

folic acid (ISO)

fulvestrant (ISO)

furan (EXP)

gamma-aminobutyric acid (EXP)

gamma-Oryzanol (TN) (EXP)

genistein (EXP)

isoprenaline (EXP,ISO)

ivermectin (ISO)

L-methionine (ISO)

lead(0) (ISO)

lead(2+) (ISO)

lidocaine (EXP)

lipopolysaccharide (ISO)

losartan (EXP,ISO)

LY294002 (EXP)

mercury dibromide (ISO)

methotrexate (ISO)

milrinone (EXP)

monocrotaline (EXP)

N-methyl-N'-nitro-N-nitrosoguanidine (EXP)

nickel atom (ISO)

nickel sulfate (ISO)

ochratoxin A (EXP)

oxaliplatin (EXP)

ozone (ISO)

paclitaxel (ISO)

paracetamol (ISO)

paricalcitol (ISO)

PD-166866 (EXP)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

phosphorus atom (ISO)

phosphorus(.) (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

razoxane (EXP)

rofecoxib (ISO)

rotenone (EXP)

SB 203580 (EXP)

SB 431542 (ISO)

selenium atom (ISO)

silicon dioxide (EXP)

silver atom (ISO)

silver(0) (ISO)

sirolimus (EXP)

sodium arsenite (ISO)

sunitinib (ISO)

tamoxifen (ISO)

testosterone (EXP)

tetrachloromethane (ISO)

topotecan (EXP,ISO)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (ISO)

valsartan (EXP)

vinclozolin (EXP)

vincristine (ISO)

wortmannin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bone regeneration (IEP)

cell adhesion (IBA,ISO)

cellular response to fibroblast growth factor stimulus (IEP)

cellular response to transforming growth factor beta stimulus (IEP)

cellular response to tumor necrosis factor (IEP)

cellular response to vitamin K (ISO)

extracellular matrix organization (IBA,ISO)

negative regulation of cell-matrix adhesion (IDA)

negative regulation of substrate adhesion-dependent cell spreading (IDA)

neuron projection extension (IMP)

positive regulation of chemokine (C-X-C motif) ligand 2 production (IMP)

positive regulation of smooth muscle cell migration (IMP)

regulation of Notch signaling pathway (ISO)

regulation of systemic arterial blood pressure (IDA)

response to estradiol (IEP)

response to hypoxia (IEP)

response to mechanical stimulus (IEP)

response to muscle activity (IEP)

tissue development (ISO)

Cellular Component

collagen-containing extracellular matrix (ISO)

extracellular matrix (IBA,ISO)

extracellular space (IDA)

neuromuscular junction (IDA)

trans-Golgi network (ISO)

Molecular Function

cell adhesion molecule binding (IBA)

heparin binding (ISO)

metal ion binding (ISO)

protein binding (IPI,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Temporal healing in rat achilles tendon: ultrasound correlations.	Chamberlain CS, etal., Ann Biomed Eng. 2013 Mar;41(3):477-87. doi: 10.1007/s10439-012-0689-y. Epub 2012 Nov 13.
2.	Exposure-dependent increases in IL-1beta, substance P, CTGF, and tendinosis in flexor digitorum tendons with upper extremity repetitive strain injury.	Fedorczyk JM, etal., J Orthop Res. 2009 Sep 9.
3.	Thymic stromal lymphopoietin, IL-33, and periostin in hospitalized infants with viral bronchiolitis.	García-García ML, etal., Medicine (Baltimore). 2017 May;96(18):e6787. doi: 10.1097/MD.0000000000006787.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
6.	Identification of periostin as a critical marker of progression/reversal of hypertensive nephropathy.	Guerrot D, etal., PLoS One. 2012;7(3):e31974. doi: 10.1371/journal.pone.0031974. Epub 2012 Mar 5.
7.	Expression and regulation of periostin/OSF-2 gene in rat uterus and human endometrium.	Hiroi H, etal., Endocr J. 2008 Mar;55(1):183-9. Epub 2008 Feb 13.
8.	[The expressions of periostin and the related factors during healing process of full-thickness cutaneous wound in rat].	Hou JJ, etal., Zhongguo Wei Zhong Bing Ji Jiu Yi Xue. 2012 Jun;24(6):334-7.
9.	Periostin as a novel factor responsible for ventricular dilation.	Katsuragi N, etal., Circulation. 2004 Sep 28;110(13):1806-13. Epub 2004 Sep 20.
10.	Corneal dystrophy-associated R124H mutation disrupts TGFBI interaction with Periostin and causes mislocalization to the lysosome.	Kim BY, etal., J Biol Chem. 2009 Jul 17;284(29):19580-91. doi: 10.1074/jbc.M109.013607. Epub 2009 May 28.
11.	Histochemical examinations on cortical bone regeneration induced by thermoplastic bioresorbable plates applied to bone defects of rat calvariae.	Kojima T, etal., Biomed Res. 2007 Aug;28(4):219-29.
12.	Phosphatidylinositol-3-kinase signaling mediates vascular smooth muscle cell expression of periostin in vivo and in vitro.	Li G, etal., Atherosclerosis. 2006 Oct;188(2):292-300. Epub 2005 Dec 1.
13.	[Roles of periostin in proliferation and migration of vascular smooth muscle cells and the effect of atorvastatin on them].	Li J, etal., Zhong Nan Da Xue Xue Bao Yi Xue Ban. 2012 Jul;37(7):689-94. doi: 10.3969/j.issn.1672-7347.2012.07.007.
14.	Hypoxia-responsive growth factors upregulate periostin and osteopontin expression via distinct signaling pathways in rat pulmonary arterial smooth muscle cells.	Li P, etal., J Appl Physiol (1985). 2004 Oct;97(4):1550-8; discussion 1549. Epub 2004 Apr 30.
15.	Vascular injury induces expression of periostin: implications for vascular cell differentiation and migration.	Lindner V, etal., Arterioscler Thromb Vasc Biol. 2005 Jan;25(1):77-83. Epub 2004 Oct 28.
16.	Periostin and periostin-like factor in the human heart: possible therapeutic targets.	Litvin J, etal., Cardiovasc Pathol. 2006 Jan-Feb;15(1):24-32.
17.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
18.	Periostin as a modulator of chronic cardiac remodeling after myocardial infarction.	Minicucci MF, etal., Clinics (Sao Paulo). 2013 Oct;68(10):1344-9. doi: 10.6061/clinics/2013(10)09.
19.	Left ventricular periostin gene expression is associated with fibrogenesis in experimental renal insufficiency.	Pohjolainen V, etal., Nephrol Dial Transplant. 2012 Jan;27(1):115-22. doi: 10.1093/ndt/gfr279. Epub 2011 Jun 28.
20.	Role of TNF alpha and PLF in bone remodeling in a rat model of repetitive reaching and grasping.	Rani S, etal., J Cell Physiol. 2010 Oct;225(1):152-67. doi: 10.1002/jcp.22208.
21.	Induction of periostin-like factor and periostin in forearm muscle, tendon, and nerve in an animal model of work-related musculoskeletal disorder.	Rani S, etal., J Histochem Cytochem. 2009 Nov;57(11):1061-73. doi: 10.1369/jhc.2009.954081. Epub 2009 Jul 20.
22.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
23.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
24.	Comprehensive gene review and curation	RGD comprehensive gene curation
25.	Periostin: novel tissue and urinary biomarker of progressive renal injury induces a coordinated mesenchymal phenotype in tubular cells.	Satirapoj B, etal., Nephrol Dial Transplant. 2012 Jul;27(7):2702-11. doi: 10.1093/ndt/gfr670. Epub 2011 Dec 13.
26.	Astroglial-derived periostin promotes axonal regeneration after spinal cord injury.	Shih CH, etal., J Neurosci. 2014 Feb 12;34(7):2438-43. doi: 10.1523/JNEUROSCI.2947-13.2014.
27.	Increased periostin gene expression in degenerative intervertebral disc cells.	Tsai TT, etal., Spine J. 2013 Mar;13(3):289-98. doi: 10.1016/j.spinee.2013.01.040. Epub 2013 Feb 27.
28.	Periostin links mechanical strain to inflammation in abdominal aortic aneurysm.	Yamashita O, etal., PLoS One. 2013 Nov 19;8(11):e79753. doi: 10.1371/journal.pone.0079753. eCollection 2013.
29.	Periostin-like-factor in osteogenesis.	Zhu S, etal., J Cell Physiol. 2009 Mar;218(3):584-92. doi: 10.1002/jcp.21633.

Additional References at PubMed

PMID:7663166	PMID:10404027	PMID:12235007	PMID:16314533	PMID:18450759	PMID:19723774	PMID:20083223	PMID:20551380	PMID:21367774	PMID:21762408	PMID:24006456	PMID:24563484
PMID:25173938	PMID:25303869	PMID:25894199	PMID:26281830	PMID:26541456	PMID:26644236	PMID:27068509	PMID:27220372	PMID:27559042	PMID:28849131	PMID:29941453	PMID:30890453
PMID:31127625	PMID:31522346	PMID:32420385	PMID:32461137	PMID:33637721	PMID:33744420	PMID:33834866	PMID:35001858	PMID:35619555

Genomics

Comparative Map Data

Postn
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	138,527,714 - 138,559,098 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	138,527,696 - 138,559,099 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	145,095,839 - 145,127,099 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	2	143,207,896 - 143,239,160 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	2	137,839,726 - 137,870,988 (+)	NCBI	Rnor_WKY
Rnor_6.0	2	143,656,820 - 143,688,087 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	143,656,793 - 143,688,087 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	163,331,229 - 163,362,444 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	143,537,099 - 143,568,341 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	143,487,061 - 143,518,300 (+)	NCBI
Celera	2	133,010,117 - 133,041,246 (+)	NCBI		Celera
Cytogenetic Map	2	q26	NCBI

POSTN
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	37,562,585 - 37,598,768 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	13	37,562,583 - 37,598,844 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	13	38,136,722 - 38,172,905 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	37,034,779 - 37,070,874 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	13	37,034,778 - 37,070,874	NCBI
Celera	13	19,190,321 - 19,226,587 (-)	NCBI		Celera
Cytogenetic Map	13	q13.3	NCBI
HuRef	13	18,936,182 - 18,972,459 (-)	NCBI		HuRef
CHM1_1	13	38,104,259 - 38,140,559 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	13	36,781,967 - 36,818,162 (-)	NCBI		T2T-CHM13v2.0

Postn
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	54,266,688 - 54,298,462 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	54,268,530 - 54,298,458 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	54,359,267 - 54,391,041 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	54,361,109 - 54,391,037 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	54,165,047 - 54,194,954 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	54,449,054 - 54,478,961 (+)	NCBI		MGSCv36	mm8
Celera	3	54,083,066 - 54,112,946 (+)	NCBI		Celera
Cytogenetic Map	3	C	NCBI

Postn
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	8,510,624 - 8,544,971 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	8,510,646 - 8,544,901 (+)	NCBI	ChiLan1.0	ChiLan1.0

POSTN
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	13	28,198,569 - 28,234,479 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	18,779,297 - 18,815,207 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	37,371,296 - 37,407,202 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	37,368,030 - 37,407,212 (-)	Ensembl	panpan1.1		panPan2

POSTN
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	3,167,319 - 3,208,970 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	3,167,359 - 3,208,411 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	3,262,519 - 3,304,168 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	3,265,809 - 3,307,415 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	3,265,828 - 3,307,415 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	3,169,826 - 3,211,442 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	3,159,797 - 3,201,445 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	3,231,130 - 3,272,726 (+)	NCBI		UU_Cfam_GSD_1.0

Postn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	164,274,642 - 164,307,376 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	31,644,778 - 31,677,572 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936472	31,644,778 - 31,677,572 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POSTN
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	13,224,959 - 13,258,978 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	11	13,225,183 - 13,258,973 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	13,200,044 - 13,233,804 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POSTN
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	16,060,013 - 16,095,867 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	16,059,965 - 16,095,791 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666057	28,185,692 - 28,221,490 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Postn
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624920	540,750 - 575,855 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624920	542,479 - 575,760 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Postn
45 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	232
Count of miRNA genes:	153
Interacting mature miRNAs:	175
Transcripts:	ENSRNOT00000017453
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	25413423	143657569	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	157142209	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	182042367	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	43154682	202446871	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
2293671	Bss44	Bone structure and strength QTL 44	10.97	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	2	43162366	148478373	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
61438	Cia7	Collagen induced arthritis QTL 7	4.6	0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	2	59324377	141596857	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
1558653	Prcr1	Prostate cancer resistance QTL 1	5		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	2	72532993	157142209	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	76539322	150540526	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
2299162	Iddm32	Insulin dependent diabetes mellitus QTL 32	2.36		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	78665616	143657569	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	102803808	147803808	Rat
8662836	Vetf8	Vascular elastic tissue fragility QTL 8	0.66		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	104559726	149559726	Rat
1581552	Pur12	Proteinuria QTL 12	5.19	0.0009	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	2	112103657	148076632	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	112456140	212696837	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	112456140	212696837	Rat
1354594	Despr10	Despair related QTL 10		0.00000249	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	2	114654253	159654253	Rat
1359035	Bp276	Blood pressure QTL 276			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	114837527	143657569	Rat
1359035	Bp276	Blood pressure QTL 276			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	114837527	143657569	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	114837527	185876470	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	114837527	185876470	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	114837527	211674221	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	114837675	212549332	Rat
5135226	Leukc2	Leukocyte quantity QTL 2			eosinophil quantity (VT:0002602)	blood eosinophil count (CMO:0000033)	2	118111229	149559726	Rat
1582257	Gluco21	Glucose level QTL 21	3.1	0.0035	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	118111229	157142209	Rat
738007	Anxrr7	Anxiety related response QTL 7	4.4		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	2	118189491	163189491	Rat
1581578	Cm49	Cardiac mass QTL 49	4.9	0.01	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	127447387	143657569	Rat
1358360	Sradr2	Stress Responsive Adrenal Weight QTL 2	10.24		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	2	129164097	152195315	Rat
6907363	Bp357	Blood pressure QTL 357	4.1	0.002	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	129540907	174540907	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	133914684	202447032	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	135552573	202446871	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	135552573	202446871	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	135552573	202446871	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	135552573	202446871	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	2	135552573	202446871	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	136445150	202447032	Rat
1581502	Esta3	Estrogen-induced thymic atrophy QTL 3			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	136916935	189599348	Rat
1359022	Ppulsi1	Prepulse inhibition QTL 1	3.63		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	2	136916935	213594495	Rat
12879830	Bw178	Body weight QTL 178		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	2	137219876	142323610	Rat
12879831	Cm82	Cardiac mass QTL 82		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	2	137219876	142323610	Rat
12879832	Cm83	Cardiac mass QTL 83		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	137219876	142323610	Rat
12879833	Cm84	Cardiac mass QTL 84		0.001	heart right ventricle mass (VT:0007033)	heart weight to body weight ratio (CMO:0000074)	2	137219876	142323610	Rat
12879834	Am1	Aortic mass QTL 1		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	2	137219876	142323610	Rat
12879835	Kidm60	Kidney mass QTL 60		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	137219876	142323610	Rat
1549841	Bp256	Blood pressure QTL 256		0.03	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	137219876	142323610	Rat

Markers in Region

D2Got432

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	138,555,474 - 138,555,761 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	143,684,464 - 143,684,750	NCBI	Rnor6.0
Rnor_5.0	2	163,358,821 - 163,359,107	UniSTS	Rnor5.0
Cytogenetic Map	2	q26	UniSTS

RH132037

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	138,550,436 - 138,550,629 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	143,679,426 - 143,679,618	NCBI	Rnor6.0
Rnor_5.0	2	163,353,843 - 163,354,035	UniSTS	Rnor5.0
RGSC_v3.4	2	143,559,680 - 143,559,872	UniSTS	RGSC3.4
Celera	2	133,032,697 - 133,032,889	UniSTS
RH 3.4 Map	2	860.5	UniSTS
Cytogenetic Map	2	q26	UniSTS

AI747096

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	138,558,701 - 138,558,848 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	143,687,691 - 143,687,837	NCBI	Rnor6.0
Rnor_5.0	2	163,362,048 - 163,362,194	UniSTS	Rnor5.0
RGSC_v3.4	2	143,567,945 - 143,568,091	UniSTS	RGSC3.4
Celera	2	133,040,850 - 133,040,996	UniSTS
Cytogenetic Map	2	q26	UniSTS

RH143459

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	138,546,955 - 138,547,131 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	143,675,945 - 143,676,120	NCBI	Rnor6.0
Rnor_5.0	2	163,350,362 - 163,350,537	UniSTS	Rnor5.0
RGSC_v3.4	2	143,556,199 - 143,556,374	UniSTS	RGSC3.4
Celera	2	133,029,216 - 133,029,391	UniSTS
RH 3.4 Map	2	860.5	UniSTS
Cytogenetic Map	2	q26	UniSTS

AA997633

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	138,558,825 - 138,558,936 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	143,687,815 - 143,687,925	NCBI	Rnor6.0
Rnor_5.0	2	163,362,172 - 163,362,282	UniSTS	Rnor5.0
RGSC_v3.4	2	143,568,069 - 143,568,179	UniSTS	RGSC3.4
Celera	2	133,040,974 - 133,041,084	UniSTS
RH 3.4 Map	2	860.7	UniSTS
Cytogenetic Map	2	q26	UniSTS

UniSTS:234679

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	138,533,942 - 138,534,072 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	143,662,932 - 143,663,061	NCBI	Rnor6.0
Rnor_5.0	2	163,337,349 - 163,337,478	UniSTS	Rnor5.0
RGSC_v3.4	2	143,543,186 - 143,543,315	UniSTS	RGSC3.4
Celera	2	133,016,203 - 133,016,332	UniSTS
Cytogenetic Map	2	q26	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High											7
Medium	3	38	31	15	18	15	7	10	39	22	26	11	7
Low		5	19	19	1	19	1	1	35	12	5		1
Below cutoff			6	6		6				1	3

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC118066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KM117173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000017453 ⟹ ENSRNOP00000017453

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	138,527,842 - 138,559,099 (+)	Ensembl
Rnor_6.0 Ensembl	2	143,656,845 - 143,688,087 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000084527 ⟹ ENSRNOP00000073724

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	138,527,701 - 138,559,096 (+)	Ensembl
Rnor_6.0 Ensembl	2	143,656,793 - 143,688,085 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000110012 ⟹ ENSRNOP00000077367

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	138,527,696 - 138,553,668 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000110085 ⟹ ENSRNOP00000087898

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	138,527,757 - 138,559,088 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000110263 ⟹ ENSRNOP00000093637

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	138,527,842 - 138,559,096 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000113750 ⟹ ENSRNOP00000076441

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	138,527,834 - 138,559,093 (+)	Ensembl

RefSeq Acc Id:

NM_001108550 ⟹ NP_001102020

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	138,527,856 - 138,559,098 (+)	NCBI
Rnor_6.0	2	143,656,845 - 143,688,087 (+)	NCBI
Rnor_5.0	2	163,331,229 - 163,362,444 (+)	NCBI
RGSC_v3.4	2	143,537,099 - 143,568,341 (+)	RGD
Celera	2	133,010,117 - 133,041,246 (+)	RGD

Sequence:

show sequence

CGGAGCTCAGGGCTGAAGATGGTTCCTCTCCTGCCCTTATCTGCTCTGCTGCTGCTGTTCCTGT
GTGACGTTGACCCCGCAAATGCCAACAGTTACTATGACAAGGTCCTAGCTCACAGCCGCATCAG
GGGTCGGGATCAGGGCCCAAATGTCTGTGCCCTCCAGCAGATTCTGGGCACCAAAAAGAAATAC
TTCAGCTCCTGTAAGAACTGGTATCAAGGTGCTATCTGCGGGAAGAAAACCACTGTGCTATATG
AATGCTGCCCCGGCTATATGAGAATGGAAGGGATGAAAGGCTGCCCAGCAGTGATGCCCATTGA
CCATGTTTATGGCACGCTGGGCATCGTGGGAGCCACGACCACTCAACACTATTCTGATGTCTCG
AAGCTCAGGGAAGAGATTGAAGGAAAAGGGTCCTACACATACTTCGCGCCGAGTAACGAAGCTT
GGGACAACCTGGATTCCGACATCCGCAGAGGACTAGAGAACAATGTCAATGTTGAGTTACTGAA
CGCTTTACACAGCCACATGGTTAATAAGAGAATGCTAACCAAGGACCTGAAACACGGCATGGTT
ATTCCTTCAATGTACAACAATCTGGGGCTTTTTATCAATCATTATCCCAATGGGGTTGTCACTG
TGAACTGTGCTCGAGTAATCCACGGGAACCAGATTGCCACAAATGGTGTTGTCCATGTCATCGA
CCGTGTCCTGACACAAATTGGCACCTCCATCCAAGACTTCATTGAAGCAGAAGATGAGCTTTCA
TCATTCAGAGCGGCTGCCATCACTTCTGACCTTTTGGAGTCCCTTGGAAGAGACGGTCACTTCA
CACTCTTTGCTCCCACCAATGAGGCTTTCGAGAAACTCCCACGAGGAGTCCTAGAAAGGATCAT
GGGAGACAAAGTGGCTTCTGAAGCTCTCATGAAGTACCACATCCTGAATACCCTCCAGTGCTCT
GAGGCTATCACAGGAGGAGCGGTGTTTGAGACCATGGAAGGAAACACTATTGAAATAGGGTGTG
AGGGAGACAGCATCTCCATTAACGGAATCAAGATGGTGAACAAGAAAGACATTGTGACGAAGAA
TGGTGTCATCCACCTGATTGATGAAGTCCTCATTCCTGATTCTGCTAAACAAGTTATTGAGCTG
GCTGGAAAACAGCAAACCACTTTCACGGACCTGGTAGCCCAGTTAGGGTTGGCGTCTTCTCTGA
AGCCGGATGGAGAGTACACGCTGTTAGCGCCTGTGAACAATGCGTTCTCTGATGACACTCTGAG
CATGGACCAGCGCCTTCTTAAGCTAATTCTGCAAAATCACATATTGAAAGTAAAAGTCGGCCTT
AGTGATCTCTACAATGGACAGATTCTGGAGACCATTGGAGGCAAACAACTCCGTGTCTTCGTGT
ATCGGACGGCTATCTGCATAGAAAACTCATGCATGGTGAGAGGAAGCAAGCAGGGGAGGAACGG
TGCCATTCACATATTCCGAGAGATCATCCAACCGGCGGAGAAGTCCCTGCACGAAAAACTGCGC
CAAGATAAGCGCTTCAGCATCTTCCTCAGCCTCCTCGAAGCTGCAGATCTGAAAGATCTTCTGA
CACAGCCCGGAGATTGGACCTTGTTTGCACCAACCAATGATGCCTTCAAGGGAATGACTAATGA
AGAAAGGGAGATTCTGATTGGGGATAAAAATGCTCTCCAAAACATCATTCTTTACCACCTGACC
CCAGGGGTTTATATTGGAAAGGGATTTGAACCCGGAGTCACCAACATCCTGAAGACCACACAGG
GAAGCAAAATCTATGTGAAAGGAGTCAATGAGACGCTTTTGGTGAATGAGTTGAAGTCCAAAGA
ATCTGACATCATGACAACAAACGGCGTCATTCACGTTGTGGACAAACTCCTCTATCCAGCAGAC
ATTCCGGTTGGAAATGATCAGCTCTTGGAATTACTGAACAAACTGATAAAATACATCCAAATTA
AGTTCGTTCGTGGCAGCACCTTCAAAGAAATCCCCATGACTGTCTATACAACTAAAATTATAAC
CAAACTCGTGGAACCAAAAATTAAAGTCATTCAAGGCAGTCTTCAGCCTATTATCAAAACAGAA
GGACCTGCAATGACGAAGATCCACATTGAAGGCGAGCCTGACTTCAGGCTGATTAAAGAAGGTG
AAACAGTGACAGAAGTGATCCACGGAGAACCAGTCATTAAAAAGTACACCAAAATCATAGACGG
GGTTCCTGTTGAAATAACTGAAAAAGAGACCCGGGAAGAACGCATCATCACAGGTCCTGAGATA
AAATACACTAGGATTTCCACAGGAGGTGGGGAAACAGAAGAGACCCTGCAGAAATTCTTGCAAA
AAGACACACCTGCAAAGAAGATACAAGCCAACAAAAGGGTTCAAGGGTCTAGAAGGCGATCAAG
AGAAGGCCGTTCTCAGTGAAAATTCAAAGGCCAGACAACAGAGTTTATATAATCCTAAATCAAC
AATCTGATTTTTAAGGGAAATTATAAGAGCCCCATTGACTTCGGAATCTGAAATGGCAACAAAC
AGAAGCTAATTGTCAAGCAAATCTGAACGCAGAGTTAATTTGTTTCTGAATGAGAAACATAGGA
AAATGATAGTCTCCTGTGGGGTAGGAACTGAAGGAAATATAGGACCATGCAGGGATTTTATCTC
AATGAGAGAAGTTCTGATTATATTAGGAATCCACCAAAGACCATCATTGTGACTGGATCCACAC
AGCTAAGTCTTTGCTCAGTGAACATGGTCAAGAAGAGGCTGGAAAAACCCAAAGCACACAGTTA
CCTTTCCATGGGAGGCTAAGCTATCAAAAGCGGTGTTCAGTTATACAACAAGCAAGCCAAGCCA
CCAAATTACAAACAGTGGTGTTACATATTTCTCGTGCAATGTGGGTTTCCTGCTAAATTTTGTT
GTTTTTACACTTGATTTATATCCTCGAGATGATTGTCATATGCTTTTTGCAGTACAAATGTTTC
TCTCAAACATTTCAATAAAAACATTCTTCAGGTATAAAGAGAATTACTTCAGACTTGGTAATTC
AGAAAACTCAAGGTTTAAGTTAAAAGTGAGTTTAGACTTTGGAATAGGACTTCATACCTTTTTT
TATTGTTAACAAGTACTCAATAAAGGAATCTGAATAACATA

hide sequence

RefSeq Acc Id:

XM_006232335 ⟹ XP_006232397

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	138,527,853 - 138,559,096 (+)	NCBI
Rnor_6.0	2	143,656,820 - 143,688,085 (+)	NCBI
Rnor_5.0	2	163,331,229 - 163,362,444 (+)	NCBI

Sequence:

show sequence

AACACAGGCCAGATCTCTTCCTGGACGGAGCTCAGGGCTGAAGATGGTTCCTCTCCTGCCCTTA
TCTGCTCTGCTGCTGCTGTTCCTGTGTGACGTTGACCCCGCAAATGCCAACAGTTACTATGACA
AGGTCCTAGCTCACAGCCGCATCAGGGGTCGGGATCAGGGCCCAAATGTCTGTGCCCTCCAGCA
GATTCTGGGCACCAAAAAGAAATACTTCAGCTCCTGTAAGAACTGGTATCAAGGTGCTATCTGC
GGGAAGAAAACCACTGTGCTATATGAATGCTGCCCCGGCTATATGAGAATGGAAGGGATGAAAG
GCTGCCCAGCAGTGATGCCCATTGACCATGTTTATGGCACGCTGGGCATCGTGGGAGCCACGAC
CACTCAACACTATTCTGATGTCTCGAAGCTCAGGGAAGAGATTGAAGGAAAAGGGTCCTACACA
TACTTCGCGCCGAGTAACGAAGCTTGGGACAACCTGGATTCCGACATCCGCAGAGGACTAGAGA
ACAATGTCAATGTTGAGTTACTGAACGCTTTACACAGCCACATGGTTAATAAGAGAATGCTAAC
CAAGGACCTGAAACACGGCATGGTTATTCCTTCAATGTACAACAATCTGGGGCTTTTTATCAAT
CATTATCCCAATGGGGTTGTCACTGTGAACTGTGCTCGAGTAATCCACGGGAACCAGATTGCCA
CAAATGGTGTTGTCCATGTCATCGACCGTGTCCTGACACAAATTGGCACCTCCATCCAAGACTT
CATTGAAGCAGAAGATGAGCTTTCATCATTCAGAGCGGCTGCCATCACTTCTGACCTTTTGGAG
TCCCTTGGAAGAGACGGTCACTTCACACTCTTTGCTCCCACCAATGAGGCTTTCGAGAAACTCC
CACGAGGAGTCCTAGAAAGGATCATGGGAGACAAAGTGGCTTCTGAAGCTCTCATGAAGTACCA
CATCCTGAATACCCTCCAGTGCTCTGAGGCTATCACAGGAGGAGCGGTGTTTGAGACCATGGAA
GGAAACACTATTGAAATAGGGTGTGAGGGAGACAGCATCTCCATTAACGGAATCAAGATGGTGA
ACAAGAAAGACATTGTGACGAAGAATGGTGTCATCCACCTGATTGATGAAGTCCTCATTCCTGA
TTCTGCTAAACAAGTTATTGAGCTGGCTGGAAAACAGCAAACCACTTTCACGGACCTGGTAGCC
CAGTTAGGGTTGGCGTCTTCTCTGAAGCCGGATGGAGAGTACACGCTGTTAGCGCCTGTGAACA
ATGCGTTCTCTGATGACACTCTGAGCATGGACCAGCGCCTTCTTAAGCTAATTCTGCAAAATCA
CATATTGAAAGTAAAAGTCGGCCTTAGTGATCTCTACAATGGACAGATTCTGGAGACCATTGGA
GGCAAACAACTCCGTGTCTTCGTGTATCGGACGGCTATCTGCATAGAAAACTCATGCATGGTGA
GAGGAAGCAAGCAGGGGAGGAACGGTGCCATTCACATATTCCGAGAGATCATCCAACCGGCGGA
GAAGTCCCTGCACGAAAAACTGCGCCAAGATAAGCGCTTCAGCATCTTCCTCAGCCTCCTCGAA
GCTGCAGATCTGAAAGATCTTCTGACACAGCCCGGAGATTGGACCTTGTTTGCACCAACCAATG
ATGCCTTCAAGGGAATGACTAATGAAGAAAGGGAGATTCTGATTGGGGATAAAAATGCTCTCCA
AAACATCATTCTTTACCACCTGACCCCAGGGGTTTATATTGGAAAGGGATTTGAACCCGGAGTC
ACCAACATCCTGAAGACCACACAGGGAAGCAAAATCTATGTGAAAGGAGTCAATGAGACGCTTT
TGGTGAATGAGTTGAAGTCCAAAGAATCTGACATCATGACAACAAACGGCGTCATTCACGTTGT
GGACAAACTCCTCTATCCAGCAGACATTCCGGTTGGAAATGATCAGCTCTTGGAATTACTGAAC
AAACTGATAAAATACATCCAAATTAAGTTCGTTCGTGGCAGCACCTTCAAAGAAATCCCCATGA
CTGTCTATACAACTAAAATTATAACCAAACTCGTGGAACCAAAAATTAAAGTCATTCAAGGCAG
TCTTCAGCCTATTATCAAAACAGAAGGACCTGCAATGACGAAGATCCACATTGAAGGCGAGCCT
GACTTCAGGCTGATTAAAGAAGGTGAAACAGTGACAGAAGTGATCCACGGAGAACCAGTCATTA
AAAAGTACACCAAAATCATAGACGGGGTTCCTGTTGAAATAACTGAAAAAGAGACCCGGGAAGA
ACGCATCATCACAGGTCCTGAGATAAAATACACTAGGATTTCCACAGGAGGTGGGGAAACAGAA
GAGACCCTGCAGAAATTCTTGCAAAAAGAGGTCTCCAAGGTCACAAAGTTCATTGAAGGTGGCG
ATGGTCACTTATTTGAAGATGAGGCGATTAAAAGACTGCTTCAGGGAGACACACCTGCAAAGAA
GATACAAGCCAACAAAAGGGTTCAAGGGTCTAGAAGGCGATCAAGAGAAGGCCGTTCTCAGTGA
AAATTCAAAGGCCAGACAACAGAGTTTATATAATCCTAAATCAACAATCTGATTTTTAAGGGAA
ATTATAAGAGCCCCATTGACTTCGGAATCTGAAATGGCAACAAACAGAAGCTAATTGTCAAGCA
AATCTGAACGCAGAGTTAATTTGTTTCTGAATGAGAAACATAGGAAAATGATAGTCTCCTGTGG
GGTAGGAACTGAAGGAAATATAGGACCATGCAGGGATTTTATCTCAATGAGAGAAGTTCTGATT
ATATTAGGAATCCACCAAAGACCATCATTGTGACTGGATCCACACAGCTAAGTCTTTGCTCAGT
GAACATGGTCAAGAAGAGGCTGGAAAAACCCAAAGCACACAGTTACCTTTCCATGGGAGGCTAA
GCTATCAAAAGCGGTGTTCAGTTATACAACAAGCAAGCCAAGCCACCAAATTACAAACAGTGGT
GTTACATATTTCTCGTGCAATGTGGGTTTCCTGCTAAATTTTGTTGTTTTTACACTTGATTTAT
ATCCTCGAGATGATTGTCATATGCTTTTTGCAGTACAAATGTTTCTCTCAAACATTTCAATAAA
AACATTCTTCAGGTATAAAGAGAATTACTTCAGACTTGGTAATTCAGAAAACTCAAGGTTTAAG
TTAAAAGTGAGTTTAGACTTTGGAATAGGACTTCATACCTTTTTTTATTGTTAACAAGTACTCA
ATAAAGGAATCTGAATAACA

hide sequence

RefSeq Acc Id:

XM_006232336 ⟹ XP_006232398

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	138,527,714 - 138,559,096 (+)	NCBI
Rnor_6.0	2	143,656,822 - 143,688,085 (+)	NCBI
Rnor_5.0	2	163,331,229 - 163,362,444 (+)	NCBI

Sequence:

show sequence

CACAGGCCAGATCTCTTCCTGGACGGAGCTCAGGGCTGAAGATGGTTCCTCTCCTGCCCTTATC
TGCTCTGCTGCTGCTGTTCCTGTGTGACGTTGACCCCGCAAATGCCAACAGTTACTATGACAAG
GTCCTAGCTCACAGCCGCATCAGGGGTCGGGATCAGGGCCCAAATGTCTGTGCCCTCCAGCAGA
TTCTGGGCACCAAAAAGAAATACTTCAGCTCCTGTAAGAACTGGTATCAAGGTGCTATCTGCGG
GAAGAAAACCACTGTGCTATATGAATGCTGCCCCGGCTATATGAGAATGGAAGGGATGAAAGGC
TGCCCAGCAGTGATGCCCATTGACCATGTTTATGGCACGCTGGGCATCGTGGGAGCCACGACCA
CTCAACACTATTCTGATGTCTCGAAGCTCAGGGAAGAGATTGAAGGAAAAGGGTCCTACACATA
CTTCGCGCCGAGTAACGAAGCTTGGGACAACCTGGATTCCGACATCCGCAGAGGACTAGAGAAC
AATGTCAATGTTGAGTTACTGAACGCTTTACACAGCCACATGGTTAATAAGAGAATGCTAACCA
AGGACCTGAAACACGGCATGGTTATTCCTTCAATGTACAACAATCTGGGGCTTTTTATCAATCA
TTATCCCAATGGGGTTGTCACTGTGAACTGTGCTCGAGTAATCCACGGGAACCAGATTGCCACA
AATGGTGTTGTCCATGTCATCGACCGTGTCCTGACACAAATTGGCACCTCCATCCAAGACTTCA
TTGAAGCAGAAGATGAGCTTTCATCATTCAGAGCGGCTGCCATCACTTCTGACCTTTTGGAGTC
CCTTGGAAGAGACGGTCACTTCACACTCTTTGCTCCCACCAATGAGGCTTTCGAGAAACTCCCA
CGAGGAGTCCTAGAAAGGATCATGGGAGACAAAGTGGCTTCTGAAGCTCTCATGAAGTACCACA
TCCTGAATACCCTCCAGTGCTCTGAGGCTATCACAGGAGGAGCGGTGTTTGAGACCATGGAAGG
AAACACTATTGAAATAGGGTGTGAGGGAGACAGCATCTCCATTAACGGAATCAAGATGGTGAAC
AAGAAAGACATTGTGACGAAGAATGGTGTCATCCACCTGATTGATGAAGTCCTCATTCCTGATT
CTGCTAAACAAGTTATTGAGCTGGCTGGAAAACAGCAAACCACTTTCACGGACCTGGTAGCCCA
GTTAGGGTTGGCGTCTTCTCTGAAGCCGGATGGAGAGTACACGCTGTTAGCGCCTGTGAACAAT
GCGTTCTCTGATGACACTCTGAGCATGGACCAGCGCCTTCTTAAGCTAATTCTGCAAAATCACA
TATTGAAAGTAAAAGTCGGCCTTAGTGATCTCTACAATGGACAGATTCTGGAGACCATTGGAGG
CAAACAACTCCGTGTCTTCGTGTATCGGACGGCTATCTGCATAGAAAACTCATGCATGGTGAGA
GGAAGCAAGCAGGGGAGGAACGGTGCCATTCACATATTCCGAGAGATCATCCAACCGGCGGAGA
AGTCCCTGCACGAAAAACTGCGCCAAGATAAGCGCTTCAGCATCTTCCTCAGCCTCCTCGAAGC
TGCAGATCTGAAAGATCTTCTGACACAGCCCGGAGATTGGACCTTGTTTGCACCAACCAATGAT
GCCTTCAAGGGAATGACTAATGAAGAAAGGGAGATTCTGATTGGGGATAAAAATGCTCTCCAAA
ACATCATTCTTTACCACCTGACCCCAGGGGTTTATATTGGAAAGGGATTTGAACCCGGAGTCAC
CAACATCCTGAAGACCACACAGGGAAGCAAAATCTATGTGAAAGGAGTCAATGAGACGCTTTTG
GTGAATGAGTTGAAGTCCAAAGAATCTGACATCATGACAACAAACGGCGTCATTCACGTTGTGG
ACAAACTCCTCTATCCAGCAGACATTCCGGTTGGAAATGATCAGCTCTTGGAATTACTGAACAA
ACTGATAAAATACATCCAAATTAAGTTCGTTCGTGGCAGCACCTTCAAAGAAATCCCCATGACT
GTCTATAGACCTGCAATGACGAAGATCCACATTGAAGGCGAGCCTGACTTCAGGCTGATTAAAG
AAGGTGAAACAGTGACAGAAGTGATCCACGGAGAACCAGTCATTAAAAAGTACACCAAAATCAT
AGACGGGGTTCCTGTTGAAATAACTGAAAAAGAGACCCGGGAAGAACGCATCATCACAGGTCCT
GAGATAAAATACACTAGGATTTCCACAGGAGGTGGGGAAACAGAAGAGACCCTGCAGAAATTCT
TGCAAAAAGAGGTCTCCAAGGTCACAAAGTTCATTGAAGGTGGCGATGGTCACTTATTTGAAGA
TGAGGCGATTAAAAGACTGCTTCAGGGAGACACACCTGCAAAGAAGATACAAGCCAACAAAAGG
GTTCAAGGGTCTAGAAGGCGATCAAGAGAAGGCCGTTCTCAGTGAAAATTCAAAGGCCAGACAA
CAGAGTTTATATAATCCTAAATCAACAATCTGATTTTTAAGGGAAATTATAAGAGCCCCATTGA
CTTCGGAATCTGAAATGGCAACAAACAGAAGCTAATTGTCAAGCAAATCTGAACGCAGAGTTAA
TTTGTTTCTGAATGAGAAACATAGGAAAATGATAGTCTCCTGTGGGGTAGGAACTGAAGGAAAT
ATAGGACCATGCAGGGATTTTATCTCAATGAGAGAAGTTCTGATTATATTAGGAATCCACCAAA
GACCATCATTGTGACTGGATCCACACAGCTAAGTCTTTGCTCAGTGAACATGGTCAAGAAGAGG
CTGGAAAAACCCAAAGCACACAGTTACCTTTCCATGGGAGGCTAAGCTATCAAAAGCGGTGTTC
AGTTATACAACAAGCAAGCCAAGCCACCAAATTACAAACAGTGGTGTTACATATTTCTCGTGCA
ATGTGGGTTTCCTGCTAAATTTTGTTGTTTTTACACTTGATTTATATCCTCGAGATGATTGTCA
TATGCTTTTTGCAGTACAAATGTTTCTCTCAAACATTTCAATAAAAACATTCTTCAGGTATAAA
GAGAATTACTTCAGACTTGGTAATTCAGAAAACTCAAGGTTTAAGTTAAAAGTGAGTTTAGACT
TTGGAATAGGACTTCATACCTTTTTTTATTGTTAACAAGTACTCAATAAAGGAATCTGAATAAC
A

hide sequence

RefSeq Acc Id:

XM_006232337 ⟹ XP_006232399

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	138,527,853 - 138,559,096 (+)	NCBI
Rnor_6.0	2	143,656,822 - 143,688,085 (+)	NCBI
Rnor_5.0	2	163,331,229 - 163,362,444 (+)	NCBI

Sequence:

show sequence

CACAGGCCAGATCTCTTCCTGGACGGAGCTCAGGGCTGAAGATGGTTCCTCTCCTGCCCTTATC
TGCTCTGCTGCTGCTGTTCCTGTGTGACGTTGACCCCGCAAATGCCAACAGTTACTATGACAAG
GTCCTAGCTCACAGCCGCATCAGGGGTCGGGATCAGGGCCCAAATGTCTGTGCCCTCCAGCAGA
TTCTGGGCACCAAAAAGAAATACTTCAGCTCCTGTAAGAACTGGTATCAAGGTGCTATCTGCGG
GAAGAAAACCACTGTGCTATATGAATGCTGCCCCGGCTATATGAGAATGGAAGGGATGAAAGGC
TGCCCAGCAGTGATGCCCATTGACCATGTTTATGGCACGCTGGGCATCGTGGGAGCCACGACCA
CTCAACACTATTCTGATGTCTCGAAGCTCAGGGAAGAGATTGAAGGAAAAGGGTCCTACACATA
CTTCGCGCCGAGTAACGAAGCTTGGGACAACCTGGATTCCGACATCCGCAGAGGACTAGAGAAC
AATGTCAATGTTGAGTTACTGAACGCTTTACACAGCCACATGGTTAATAAGAGAATGCTAACCA
AGGACCTGAAACACGGCATGGTTATTCCTTCAATGTACAACAATCTGGGGCTTTTTATCAATCA
TTATCCCAATGGGGTTGTCACTGTGAACTGTGCTCGAGTAATCCACGGGAACCAGATTGCCACA
AATGGTGTTGTCCATGTCATCGACCGTGTCCTGACACAAATTGGCACCTCCATCCAAGACTTCA
TTGAAGCAGAAGATGAGCTTTCATCATTCAGAGCGGCTGCCATCACTTCTGACCTTTTGGAGTC
CCTTGGAAGAGACGGTCACTTCACACTCTTTGCTCCCACCAATGAGGCTTTCGAGAAACTCCCA
CGAGGAGTCCTAGAAAGGATCATGGGAGACAAAGTGGCTTCTGAAGCTCTCATGAAGTACCACA
TCCTGAATACCCTCCAGTGCTCTGAGGCTATCACAGGAGGAGCGGTGTTTGAGACCATGGAAGG
AAACACTATTGAAATAGGGTGTGAGGGAGACAGCATCTCCATTAACGGAATCAAGATGGTGAAC
AAGAAAGACATTGTGACGAAGAATGGTGTCATCCACCTGATTGATGAAGTCCTCATTCCTGATT
CTGCTAAACAAGTTATTGAGCTGGCTGGAAAACAGCAAACCACTTTCACGGACCTGGTAGCCCA
GTTAGGGTTGGCGTCTTCTCTGAAGCCGGATGGAGAGTACACGCTGTTAGCGCCTGTGAACAAT
GCGTTCTCTGATGACACTCTGAGCATGGACCAGCGCCTTCTTAAGCTAATTCTGCAAAATCACA
TATTGAAAGTAAAAGTCGGCCTTAGTGATCTCTACAATGGACAGATTCTGGAGACCATTGGAGG
CAAACAACTCCGTGTCTTCGTGTATCGGACGGCTATCTGCATAGAAAACTCATGCATGGTGAGA
GGAAGCAAGCAGGGGAGGAACGGTGCCATTCACATATTCCGAGAGATCATCCAACCGGCGGAGA
AGTCCCTGCACGAAAAACTGCGCCAAGATAAGCGCTTCAGCATCTTCCTCAGCCTCCTCGAAGC
TGCAGATCTGAAAGATCTTCTGACACAGCCCGGAGATTGGACCTTGTTTGCACCAACCAATGAT
GCCTTCAAGGGAATGACTAATGAAGAAAGGGAGATTCTGATTGGGGATAAAAATGCTCTCCAAA
ACATCATTCTTTACCACCTGACCCCAGGGGTTTATATTGGAAAGGGATTTGAACCCGGAGTCAC
CAACATCCTGAAGACCACACAGGGAAGCAAAATCTATGTGAAAGGAGTCAATGAGACGCTTTTG
GTGAATGAGTTGAAGTCCAAAGAATCTGACATCATGACAACAAACGGCGTCATTCACGTTGTGG
ACAAACTCCTCTATCCAGCAGACATTCCGGTTGGAAATGATCAGCTCTTGGAATTACTGAACAA
ACTGATAAAATACATCCAAATTAAGTTCGTTCGTGGCAGCACCTTCAAAGAAATCCCCATGACT
GTCTATAGACCTGCAATGACGAAGATCCACATTGAAGGCGAGCCTGACTTCAGGCTGATTAAAG
AAGGTGAAACAGTGACAGAAGTGATCCACGGAGAACCAGTCATTAAAAAGTACACCAAAATCAT
AGACGGGGTTCCTGTTGAAATAACTGAAAAAGAGACCCGGGAAGAACGCATCATCACAGGTCCT
GAGATAAAATACACTAGGATTTCCACAGGAGGTGGGGAAACAGAAGAGACCCTGCAGAAATTCT
TGCAAAAAGACACACCTGCAAAGAAGATACAAGCCAACAAAAGGGTTCAAGGGTCTAGAAGGCG
ATCAAGAGAAGGCCGTTCTCAGTGAAAATTCAAAGGCCAGACAACAGAGTTTATATAATCCTAA
ATCAACAATCTGATTTTTAAGGGAAATTATAAGAGCCCCATTGACTTCGGAATCTGAAATGGCA
ACAAACAGAAGCTAATTGTCAAGCAAATCTGAACGCAGAGTTAATTTGTTTCTGAATGAGAAAC
ATAGGAAAATGATAGTCTCCTGTGGGGTAGGAACTGAAGGAAATATAGGACCATGCAGGGATTT
TATCTCAATGAGAGAAGTTCTGATTATATTAGGAATCCACCAAAGACCATCATTGTGACTGGAT
CCACACAGCTAAGTCTTTGCTCAGTGAACATGGTCAAGAAGAGGCTGGAAAAACCCAAAGCACA
CAGTTACCTTTCCATGGGAGGCTAAGCTATCAAAAGCGGTGTTCAGTTATACAACAAGCAAGCC
AAGCCACCAAATTACAAACAGTGGTGTTACATATTTCTCGTGCAATGTGGGTTTCCTGCTAAAT
TTTGTTGTTTTTACACTTGATTTATATCCTCGAGATGATTGTCATATGCTTTTTGCAGTACAAA
TGTTTCTCTCAAACATTTCAATAAAAACATTCTTCAGGTATAAAGAGAATTACTTCAGACTTGG
TAATTCAGAAAACTCAAGGTTTAAGTTAAAAGTGAGTTTAGACTTTGGAATAGGACTTCATACC
TTTTTTTATTGTTAACAAGTACTCAATAAAGGAATCTGAATAACA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001102020	(Get FASTA)	NCBI Sequence Viewer
	XP_006232397	(Get FASTA)	NCBI Sequence Viewer
	XP_006232398	(Get FASTA)	NCBI Sequence Viewer
	XP_006232399	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AIS73061	(Get FASTA)	NCBI Sequence Viewer
	EDM14933	(Get FASTA)	NCBI Sequence Viewer
	EDM14934	(Get FASTA)	NCBI Sequence Viewer
	EDM14935	(Get FASTA)	NCBI Sequence Viewer
	EDM14936	(Get FASTA)	NCBI Sequence Viewer
	EDM14937	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_001102020 ⟸ NM_001108550
- Peptide Label:	precursor
- UniProtKB:	D3ZAF5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVPLLPLSALLLLFLCDVDPANANSYYDKVLAHSRIRGRDQGPNVCALQQILGTKKKYFSSCKN WYQGAICGKKTTVLYECCPGYMRMEGMKGCPAVMPIDHVYGTLGIVGATTTQHYSDVSKLREEI EGKGSYTYFAPSNEAWDNLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDLKHGMVIPSMYN NLGLFINHYPNGVVTVNCARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDELSSFRAAA ITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITGG AVFETMEGNTIEIGCEGDSISINGIKMVNKKDIVTKNGVIHLIDEVLIPDSAKQVIELAGKQQT TFTDLVAQLGLASSLKPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLSDLYNG QILETIGGKQLRVFVYRTAICIENSCMVRGSKQGRNGAIHIFREIIQPAEKSLHEKLRQDKRFS IFLSLLEAADLKDLLTQPGDWTLFAPTNDAFKGMTNEEREILIGDKNALQNIILYHLTPGVYIG KGFEPGVTNILKTTQGSKIYVKGVNETLLVNELKSKESDIMTTNGVIHVVDKLLYPADIPVGND QLLELLNKLIKYIQIKFVRGSTFKEIPMTVYTTKIITKLVEPKIKVIQGSLQPIIKTEGPAMTK IHIEGEPDFRLIKEGETVTEVIHGEPVIKKYTKIIDGVPVEITEKETREERIITGPEIKYTRIS TGGGETEETLQKFLQKDTPAKKIQANKRVQGSRRRSREGRSQ hide sequence

RefSeq Acc Id:	XP_006232397 ⟸ XM_006232335
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AHK0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVPLLPLSALLLLFLCDVDPANANSYYDKVLAHSRIRGRDQGPNVCALQQILGTKKKYFSSCKN WYQGAICGKKTTVLYECCPGYMRMEGMKGCPAVMPIDHVYGTLGIVGATTTQHYSDVSKLREEI EGKGSYTYFAPSNEAWDNLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDLKHGMVIPSMYN NLGLFINHYPNGVVTVNCARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDELSSFRAAA ITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITGG AVFETMEGNTIEIGCEGDSISINGIKMVNKKDIVTKNGVIHLIDEVLIPDSAKQVIELAGKQQT TFTDLVAQLGLASSLKPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLSDLYNG QILETIGGKQLRVFVYRTAICIENSCMVRGSKQGRNGAIHIFREIIQPAEKSLHEKLRQDKRFS IFLSLLEAADLKDLLTQPGDWTLFAPTNDAFKGMTNEEREILIGDKNALQNIILYHLTPGVYIG KGFEPGVTNILKTTQGSKIYVKGVNETLLVNELKSKESDIMTTNGVIHVVDKLLYPADIPVGND QLLELLNKLIKYIQIKFVRGSTFKEIPMTVYTTKIITKLVEPKIKVIQGSLQPIIKTEGPAMTK IHIEGEPDFRLIKEGETVTEVIHGEPVIKKYTKIIDGVPVEITEKETREERIITGPEIKYTRIS TGGGETEETLQKFLQKEVSKVTKFIEGGDGHLFEDEAIKRLLQGDTPAKKIQANKRVQGSRRRS REGRSQ hide sequence

RefSeq Acc Id:	XP_006232398 ⟸ XM_006232336
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K692 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVPLLPLSALLLLFLCDVDPANANSYYDKVLAHSRIRGRDQGPNVCALQQILGTKKKYFSSCKN WYQGAICGKKTTVLYECCPGYMRMEGMKGCPAVMPIDHVYGTLGIVGATTTQHYSDVSKLREEI EGKGSYTYFAPSNEAWDNLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDLKHGMVIPSMYN NLGLFINHYPNGVVTVNCARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDELSSFRAAA ITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITGG AVFETMEGNTIEIGCEGDSISINGIKMVNKKDIVTKNGVIHLIDEVLIPDSAKQVIELAGKQQT TFTDLVAQLGLASSLKPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLSDLYNG QILETIGGKQLRVFVYRTAICIENSCMVRGSKQGRNGAIHIFREIIQPAEKSLHEKLRQDKRFS IFLSLLEAADLKDLLTQPGDWTLFAPTNDAFKGMTNEEREILIGDKNALQNIILYHLTPGVYIG KGFEPGVTNILKTTQGSKIYVKGVNETLLVNELKSKESDIMTTNGVIHVVDKLLYPADIPVGND QLLELLNKLIKYIQIKFVRGSTFKEIPMTVYRPAMTKIHIEGEPDFRLIKEGETVTEVIHGEPV IKKYTKIIDGVPVEITEKETREERIITGPEIKYTRISTGGGETEETLQKFLQKEVSKVTKFIEG GDGHLFEDEAIKRLLQGDTPAKKIQANKRVQGSRRRSREGRSQ hide sequence

RefSeq Acc Id:	XP_006232399 ⟸ XM_006232337
- Peptide Label:	isoform X3
- UniProtKB:	A0A097BW25 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVPLLPLSALLLLFLCDVDPANANSYYDKVLAHSRIRGRDQGPNVCALQQILGTKKKYFSSCKN WYQGAICGKKTTVLYECCPGYMRMEGMKGCPAVMPIDHVYGTLGIVGATTTQHYSDVSKLREEI EGKGSYTYFAPSNEAWDNLDSDIRRGLENNVNVELLNALHSHMVNKRMLTKDLKHGMVIPSMYN NLGLFINHYPNGVVTVNCARVIHGNQIATNGVVHVIDRVLTQIGTSIQDFIEAEDELSSFRAAA ITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNTLQCSEAITGG AVFETMEGNTIEIGCEGDSISINGIKMVNKKDIVTKNGVIHLIDEVLIPDSAKQVIELAGKQQT TFTDLVAQLGLASSLKPDGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLSDLYNG QILETIGGKQLRVFVYRTAICIENSCMVRGSKQGRNGAIHIFREIIQPAEKSLHEKLRQDKRFS IFLSLLEAADLKDLLTQPGDWTLFAPTNDAFKGMTNEEREILIGDKNALQNIILYHLTPGVYIG KGFEPGVTNILKTTQGSKIYVKGVNETLLVNELKSKESDIMTTNGVIHVVDKLLYPADIPVGND QLLELLNKLIKYIQIKFVRGSTFKEIPMTVYRPAMTKIHIEGEPDFRLIKEGETVTEVIHGEPV IKKYTKIIDGVPVEITEKETREERIITGPEIKYTRISTGGGETEETLQKFLQKDTPAKKIQANK RVQGSRRRSREGRSQ hide sequence

RefSeq Acc Id:

ENSRNOP00000073724 ⟸ ENSRNOT00000084527

RefSeq Acc Id:

ENSRNOP00000017453 ⟸ ENSRNOT00000017453

RefSeq Acc Id:

ENSRNOP00000093637 ⟸ ENSRNOT00000110263

RefSeq Acc Id:

ENSRNOP00000077367 ⟸ ENSRNOT00000110012

RefSeq Acc Id:

ENSRNOP00000076441 ⟸ ENSRNOT00000113750

RefSeq Acc Id:

ENSRNOP00000087898 ⟸ ENSRNOT00000110085

Protein Domains

EMI FAS1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZAF5-F1-model_v2	AlphaFold	D3ZAF5	1-810	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691333

Promoter ID:

EPDNEW_R1851

Type:

single initiation site

Name:

Postn_1

Description:

periostin

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	143,656,830 - 143,656,890	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305285	AgrOrtholog
BioCyc Gene	G2FUF-53082	BioCyc
Ensembl Genes	ENSRNOG00000012660	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000017453	ENTREZGENE
	ENSRNOP00000017453.3	UniProtKB/TrEMBL
	ENSRNOP00000073724	ENTREZGENE
	ENSRNOP00000073724.2	UniProtKB/TrEMBL
	ENSRNOP00000076441.1	UniProtKB/TrEMBL
	ENSRNOP00000077367.1	UniProtKB/TrEMBL
	ENSRNOP00000087898	ENTREZGENE
	ENSRNOP00000087898.1	UniProtKB/TrEMBL
	ENSRNOP00000093637.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000017453	ENTREZGENE
	ENSRNOT00000017453.4	UniProtKB/TrEMBL
	ENSRNOT00000084527	ENTREZGENE
	ENSRNOT00000084527.2	UniProtKB/TrEMBL
	ENSRNOT00000110012.1	UniProtKB/TrEMBL
	ENSRNOT00000110085	ENTREZGENE
	ENSRNOT00000110085.1	UniProtKB/TrEMBL
	ENSRNOT00000110263.1	UniProtKB/TrEMBL
	ENSRNOT00000113750.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.180.10	UniProtKB/TrEMBL
InterPro	EMI_domain	UniProtKB/TrEMBL
	FAS1_dom_sf	UniProtKB/TrEMBL
	FAS1_domain	UniProtKB/TrEMBL
	TGFb-ind_bIGH3/osteoblast_fac2	UniProtKB/TrEMBL
KEGG Report	rno:361945	UniProtKB/TrEMBL
NCBI Gene	361945	ENTREZGENE
PANTHER	FI05614P	UniProtKB/TrEMBL
	PERIOSTIN-RELATED	UniProtKB/TrEMBL
Pfam	Fasciclin	UniProtKB/TrEMBL
PhenoGen	Postn	PhenoGen
PIRSF	BIGH3_OSF2	UniProtKB/TrEMBL
PROSITE	EMI	UniProtKB/TrEMBL
	FAS1	UniProtKB/TrEMBL
SMART	FAS1	UniProtKB/TrEMBL
Superfamily-SCOP	BIgH3_FAS1	UniProtKB/TrEMBL
UniProt	A0A097BW25	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K692	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y5Q6_RAT	UniProtKB/TrEMBL
	A0A8I5Y6L2_RAT	UniProtKB/TrEMBL
	A0A8I6AHK0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AK89_RAT	UniProtKB/TrEMBL
	D3ZAF5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-05-11	Postn	periostin	Postn	periostin, osteoblast specific factor	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Postn	periostin, osteoblast specific factor	Postn_predicted	periostin, osteoblast specific factor (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Postn_predicted	periostin, osteoblast specific factor (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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