Gene: Ush1c (USH1 protein network component harmonin) Rattus norvegicus
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Symbol: Ush1c
Name: USH1 protein network component harmonin
Description: ENCODES a protein that exhibits myosin tail binding; spectrin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); brush border assembly (ortholog); cellular protein-containing complex assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 18A (ortholog); Deafness, Autosomal Recessive 18 (ortholog); fundus dystrophy (ortholog); FOUND IN photoreceptor inner segment; photoreceptor outer segment; plasma membrane; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; furan
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: harmonin; harmonin a1; MGC112571; Usher syndrome 1C; Usher syndrome 1C homolog; Usher syndrome 1C homolog (human)
Orthologs:
Homo sapiens (human) : USH1C (USH1 protein network component harmonin)  HGNC  Alliance
Mus musculus (house mouse) : Ush1c (USH1 protein network component harmonin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ush1c (USH1 protein network component harmonin)
Pan paniscus (bonobo/pygmy chimpanzee) : USH1C (USH1 protein network component harmonin)
Canis lupus familiaris (dog) : USH1C (USH1 protein network component harmonin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ush1c (USH1 protein network component harmonin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01102,207,096 - 102,256,779 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01103,291,318 - 103,340,928 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,720,185 - 96,768,550 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1196,798,295 - 96,846,661 (-)NCBI
Celera190,943,948 - 90,992,307 (-)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ush1c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303329
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2018-11-20
Status: ACTIVE