Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Dek (DEK proto-oncogene) Rattus norvegicus
Analyze
Symbol: Dek
Name: DEK proto-oncogene
Description: Predicted to have histone binding activity. Predicted to be involved in regulation of double-strand break repair via nonhomologous end joining. Predicted to localize to the contractile fiber and nucleoplasm. Orthologous to human DEK (DEK proto-oncogene); INTERACTS WITH 17alpha-ethynylestradiol; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DEK oncogene; DEK oncogene (DNA binding); MGC94795
Orthologs:
Homo sapiens (human) : DEK (DEK proto-oncogene)  HGNC  Alliance
Mus musculus (house mouse) : Dek (DEK oncogene (DNA binding))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Dek (DEK proto-oncogene)
Pan paniscus (bonobo/pygmy chimpanzee) : DEK (DEK proto-oncogene)
Canis lupus familiaris (dog) : LOC100688177 (protein DEK pseudogene)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Dek (DEK proto-oncogene)
Sus scrofa (pig) : DEK (DEK proto-oncogene)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01717,965,872 - 17,987,836 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1717,965,881 - 17,987,834 (+)Ensembl
Rnor_5.01719,948,512 - 19,970,498 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41723,633,551 - 23,655,507 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11723,633,599 - 23,655,553 (+)NCBI
Celera1717,292,456 - 17,314,107 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Dek
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303246
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.