4930512M02Rik (RIKEN cDNA 4930512M02 gene) - Rat Genome Database

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Gene: 4930512M02Rik (RIKEN cDNA 4930512M02 gene) Mus musculus
Analyze
Symbol: 4930512M02Rik
Name: RIKEN cDNA 4930512M02 gene
RGD ID: 9831343
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: uncharacterized protein LOC102631730
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391111,539,223 - 11,577,838 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1111,539,223 - 11,577,835 (-)EnsemblGRCm39 Ensembl
GRCm381111,589,223 - 11,627,838 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1111,589,223 - 11,627,835 (-)EnsemblGRCm38mm10GRCm38
Celera1112,048,695 - 12,087,483 (-)NCBICelera
Cytogenetic Map11A1NCBI
cM Map116.97NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12904583   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in 4930512M02Rik
1304 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:146
Count of miRNA genes:136
Interacting mature miRNAs:144
Transcripts:ENSMUST00000081896, ENSMUST00000149910
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11125976374Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27095914Pglq16_mpelvic girdle length QTL 16, 16 week (mouse)11325000018150000Mouse
27095919Pglq10_mpelvic girdle length QTL 10, 10 week (mouse)11325000018450000Mouse
27095925Pglq5_mpelvic girdle length QTL 5, 5 week (mouse)11325000019750000Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11450789621379532Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11688027733916219Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
27226794Feml9_mfemur length 9, 5 week (mouse)11705000016750000Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11901178043011942Mouse
13524844Ppiq9_mprepulse inhibition QTL 9 (mouse)11904999735077325Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111095123244951464Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111095123244951464Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse


Expression


Sequence


RefSeq Acc Id: ENSMUST00000081896   ⟹   ENSMUSP00000080571
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1111,539,223 - 11,577,824 (-)Ensembl
GRCm38.p6 Ensembl1111,589,223 - 11,627,824 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149910
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1111,573,711 - 11,577,835 (-)Ensembl
GRCm38.p6 Ensembl1111,623,711 - 11,627,835 (-)Ensembl
RefSeq Acc Id: NM_001305143   ⟹   NP_001292072
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391111,539,223 - 11,577,838 (-)NCBI
GRCm381111,589,223 - 11,627,838 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001292072 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000080571
  ENSMUSP00000080571.5
RefSeq Acc Id: NP_001292072   ⟸   NM_001305143
- UniProtKB: Q5SQK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000080571   ⟸   ENSMUST00000081896

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5SQK8-F1-model_v2 AlphaFold Q5SQK8 1-218 view protein structure


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000062511 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000081896 ENTREZGENE
  ENSMUST00000081896.5 UniProtKB/TrEMBL
KEGG Report mmu:102631730 UniProtKB/TrEMBL
MGD MGI:1922360 ENTREZGENE
NCBI Gene 4930512M02Rik ENTREZGENE
PhenoGen 4930512M02Rik PhenoGen
UniProt Q5SQK8 ENTREZGENE, UniProtKB/TrEMBL