Mir466b-1 (microRNA 466b-1) - Rat Genome Database

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Pathways
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Gene: Mir466b-1 (microRNA 466b-1) Mus musculus
Analyze
Symbol: Mir466b-1
Name: microRNA 466b-1
RGD ID: 9686150
MGI Page MGI
Description: Is expressed in central nervous system and dorsal root ganglion.
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: Mir466b; Mir466b-1a; Mirn466; Mirn466b-1; Mirn466b-1a; mmu-mir-466b-1
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39210,479,030 - 10,479,111 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl210,479,030 - 10,479,111 (+)EnsemblGRCm39 Ensembl
GRCm38210,474,219 - 10,474,300 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl210,474,219 - 10,474,300 (+)EnsemblGRCm38mm10GRCm38
Celera210,414,670 - 10,414,751 (+)NCBICelera
Cytogenetic Map2A1NCBI
cM Map28.22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:16381832   PMID:17604727   PMID:20215419   PMID:20413612   PMID:21267068  


Genomics

Variants

.
Variants in Mir466b-1
2 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045633Heal15_mwound healing/regeneration 15 (mouse)Not determined2121989642Mouse
4141836Tgq11_mtriglyceride QTL 11 (mouse)Not determined125324559Mouse
4142333Tgq10_mtriglyceride QTL 10 (mouse)Not determined125324559Mouse
1301838Sluc16_msusceptibility to lung cancer 16 (mouse)Not determined2126529589Mouse
12904743Carcdq3_mcardiac collagen deposition QTL 3 (mouse)2323494028179150Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
12903993Opfaq1_mopen field activity QTL 1 (mouse)2967669127022642Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_130319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL772216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000103778
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl210,479,030 - 10,479,111 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177988
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl210,474,219 - 10,474,300 (+)Ensembl
RefSeq Acc Id: NR_130319
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39210,479,030 - 10,479,111 (+)NCBI
GRCm38210,474,219 - 10,474,300 (+)NCBI
Celera210,414,670 - 10,414,751 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000106608 Ensembl
  ENSMUSG00000119771 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000103778 ENTREZGENE
MGD MGI:3718526 ENTREZGENE
miRBase MI0005502 ENTREZGENE
NCBI Gene Mir466b-1 ENTREZGENE
PhenoGen Mir466b-1 PhenoGen
RNAcentral URS000004859F RNACentral
  URS00000723A4 RNACentral
  URS0000796645 RNACentral