Mir7091 (microRNA 7091) - Rat Genome Database
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Gene: Mir7091 (microRNA 7091) Mus musculus
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Symbol: Mir7091
Name: microRNA 7091
RGD ID: 9680454
MGI Page MGI
Description: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: Gm27381; mmu-mir-7091
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X73,317,633 - 73,317,711 (-)NCBIGRCm39mm39
GRCm38X74,274,027 - 74,274,105 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX74,274,027 - 74,274,105 (-)EnsemblGRCm38mm10GRCm38
CeleraX65,527,804 - 65,527,882 (-)NCBICelera
Cytogenetic MapXA7.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:16381832   PMID:22955976  


Genomics


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7360056151324042Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3600000078000000Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX4083262187216531Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4243170076431843Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4265674676656858Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4698383880983961Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined48090244130864007Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5290000090700000Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X55000000150000000Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5567874589678745Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5872835492728354Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6230000090800000Mouse
25314318Sccor2_msynaptonemal complex length to mean MLH1 count ratio 2 (mouse)X7150000097500000Mouse
1357730Hstx1_mhybrid sterility, X chromosome 1 (mouse)Not determinedX7241024678557206Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined72410246140302463Mouse
12879918Shm4_msperm head morphology 4 (mouse)X73028444103019114Mouse

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:32008
Count of gene targets:13030
Count of transcripts:23003
Interacting mature miRNAs:mmu-miR-7091-3p, mmu-miR-7091-5p
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_106059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL807376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000184075
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX74,274,027 - 74,274,105 (-)Ensembl
RefSeq Acc Id: NR_106059
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X73,317,633 - 73,317,711 (-)NCBI
GRCm38X74,274,027 - 74,274,105 (-)NCBI
CeleraX65,527,804 - 65,527,882 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000099226 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000184075 ENTREZGENE
MGD MGI:5530763 ENTREZGENE
miRBase MI0022941 ENTREZGENE
NCBI Gene Mir7091 ENTREZGENE
PhenoGen Mir7091 PhenoGen
RNAcentral URS000075AE96 RNACentral
  URS000075BE4A RNACentral
  URS000075C024 RNACentral