Peak1os (pseudopodium-enriched atypical kinase 1, opposite strand) - Rat Genome Database

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Gene: Peak1os (pseudopodium-enriched atypical kinase 1, opposite strand) Mus musculus
Analyze
Symbol: Peak1os
Name: pseudopodium-enriched atypical kinase 1, opposite strand
RGD ID: 9655731
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: Gm26589
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39956,148,628 - 56,232,426 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl956,165,174 - 56,175,064 (+)EnsemblGRCm39 Ensembl
GRCm38956,241,344 - 56,325,142 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl956,257,890 - 56,267,780 (+)EnsemblGRCm38mm10GRCm38
Celera953,466,939 - 53,551,486 (+)NCBICelera
Cytogenetic Map9BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in Peak1os
2319 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:107
Count of miRNA genes:101
Interacting mature miRNAs:107
Transcripts:ENSMUST00000181444
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300563Pgia5_mproteoglycan induced arthritis 5 (mouse)Not determined94883105682831177Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
4141754Fecq4_mfecundity QTL 4 (mouse)Not determined94754302457805204Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
12790990Tgl7_mtriglyceride 7 (mouse)95455996088559960Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
14746993Manh66_mmandible shape 66 (mouse)94981404883814048Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
1301184Bdln4_mbody length 4 (mouse)Not determined95015132084151448Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49452421101406120Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
13525008Hrtiq1_mheart rate time index, QTL 1 (mouse)95242609868556008Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94442817478428262Mouse
1301051Eae9_msusceptibility to experimental allergic encephalomyelitis 9 (mouse)Not determined94942029863239852Mouse
1301049El4_mepilepsy 4 (mouse)Not determined94942029867151448Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95203447899792481Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
4141572Ntta3_mneurotensin transcript abundance 3 (mouse)Not determined4659767165831177Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse
1300716Cd4ts4_mCD4 T cell subset 4 (mouse)Not determined94883105682831177Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000181444
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl956,165,174 - 56,175,064 (+)Ensembl
GRCm38.p6 Ensembl956,257,890 - 56,267,780 (+)Ensembl
RefSeq Acc Id: XR_001779176
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,181,347 (+)NCBI
GRCm38956,241,344 - 56,270,847 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003948324
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,181,347 (+)NCBI
GRCm38956,241,344 - 56,270,847 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935783
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,181,347 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935784
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,232,426 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935785
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,181,347 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935786
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,181,347 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935787
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,181,347 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935788
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,181,347 (+)NCBI
Sequence:
RefSeq Acc Id: XR_870776
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39956,148,628 - 56,181,347 (+)NCBI
GRCm38956,241,344 - 56,270,847 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000097111 Ensembl
MGD MGI:5477083 ENTREZGENE
NCBI Gene Peak1os ENTREZGENE
PhenoGen Peak1os PhenoGen