Gm36627 (predicted gene, 36627) - Rat Genome Database

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Gene: Gm36627 (predicted gene, 36627) Mus musculus
Analyze
Symbol: Gm36627
Name: predicted gene, 36627
RGD ID: 9652479
MGI Page MGI
Description:
Type: protein-coding (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: transcription elongation factor 1 homolog
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391880,059,489 - 80,059,745 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1880,059,500 - 80,059,745 (+)EnsemblGRCm39 Ensembl
GRCm381880,016,285 - 80,016,530 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1880,016,285 - 80,016,530 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map18E3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm36627
8 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357639Obsty4_mobesity 4 (mouse)Not determined183961991484638778Mouse
12904745Carcdq2_mcardiac collagen deposition QTL 2 (mouse)184642328780423287Mouse
11039493Ltpr8d_mLeishmania tropica response 8d (mouse)184687490380875042Mouse
11039494Ltpr8b_mLeishmania tropica response 8b (mouse)184687490380875042Mouse
1357630Tgq1_mtriglyceride QTL 1 (mouse)Not determined185105215685052311Mouse
11252137Modvl5_mmodifier of vacuolated lens 5 (mouse)185105215685052311Mouse
10412244Par5_mpulmonary adenoma resistance 5 (mouse)Not determined185166830085668468Mouse
1302099Hdlq30_mHDL QTL 30 (mouse)Not determined185166830085668468Mouse
1301853Heal9_mwound healing/regeneration 9 (mouse)Not determined185280527686805416Mouse
1301500Szs4_mseizure susceptibility 4 (mouse)Not determined185497587385514143Mouse
12880410V125Dq13_mvitamin D active form serum level QTL 13 (mouse)185643307190433071Mouse
12880430Fgf23lq4_mFGF23 serum level QTL 4 (mouse)185643307190433071Mouse
12880428V125Dq14_mvitamin D active form serum level QTL 14 (mouse)185743307190720763Mouse
1301353Lbw6_mlupus NZB x NZW 6 (mouse)Not determined185756233890720763Mouse
4141132Eae18_mexperimental allergic encephalomyelitis susceptibility 18 (mouse)Not determined5759055982604728Mouse
4140971Mbmq1_mmale body mass QTL 1 (mouse)Not determined5799028190720763Mouse
11049564Lmr29_mleishmaniasis resistance 29 (mouse)185918009290720763Mouse
11039495Ltpr8c_mLeishmania tropica response 8c (mouse)185918009290720763Mouse
11039492Ltpr8a_mLeishmania tropica response 8a (mouse)185918009290720763Mouse
1301103Pgia11_mproteoglycan induced arthritis 11 (mouse)Not determined185991418490720763Mouse
1302109Sluc28_msusceptibility to lung cancer 28 (mouse)Not determined185993532190720763Mouse
1558803W3q16_mweight 3 weeks QTL 16 (mouse)Not determined186127244881491831Mouse
1558782Orgwq9_morgan weight QTL 9 (mouse)Not determined186127244882604728Mouse
1301798Hdlq31_mHDL QTL 31 (mouse)Not determined186714438990720763Mouse
10401904Sicd4_mseizure-induced cell death 4 (mouse)Not determined186980527685514143Mouse
15014786Mvlq2_mmacrovesicular liver lesion QTL 2 (mouse)187156938890720763Mouse
1302183Pas7_mpulmonary adenoma susceptibility 7 (mouse)Not determined187274559484144595Mouse
4142153Idd21.1_minsulin dependent diabetes susceptibility 21.1 (mouse)Not determined187456233884144595Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_036161352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC127331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000237241
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1880,059,500 - 80,059,745 (+)Ensembl
GRCm38.p6 Ensembl1880,016,285 - 80,016,530 (+)Ensembl
RefSeq Acc Id: XM_036161352   ⟹   XP_036017245
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391880,059,489 - 80,059,745 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_036017245 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_036017245   ⟸   XM_036161352


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000118357 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000237241 ENTREZGENE
MGD MGI:5595786 ENTREZGENE
NCBI Gene Gm36627 ENTREZGENE
PhenoGen Gm36627 PhenoGen