Gene: Gm30505 (predicted gene, 30505) Mus musculus |
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Analyze |
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Symbol: |
Gm30505 |
Name: |
predicted gene, 30505 |
RGD ID: |
9650193 |
MGI Page |
MGI |
Description: |
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Type: |
ncrna (Ensembl: lncRNA)
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RefSeq Status: |
VALIDATED |
Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
Position: |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 22,693,733 - 22,713,136 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 22,693,733 - 22,713,136 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 22,874,983 - 22,894,386 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 22,874,983 - 22,894,386 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | Celera | 16 | 23,435,307 - 23,454,711 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | B1 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
QTLs in Region (GRCm39)
1301575 | Tanidd3_m | tally ho associated non-insulin dependednt diabetes mellitus 3 (mouse) | | | Not determined | | 16 | 1 | 22897739 | Mouse | 4141468 | Nhdlq10_m | non-HDL QTL 10 (mouse) | | | Not determined | | 16 | 1 | 24263853 | Mouse | 1301970 | Heal11_m | wound healing/regeneration 11 (mouse) | | | Not determined | | 16 | 1 | 24263853 | Mouse | 1301384 | Dice1_m | determination of interleukin 4 commitment 1 (mouse) | | | Not determined | | 16 | 1 | 28434358 | Mouse | 10402497 | Lmr23_m | leishmaniasis resistance 23 (mouse) | | | Not determined | | 16 | 1 | 29674200 | Mouse | 1301559 | Bbaa19_m | B.burgdorferi-associated arthritis 19 (mouse) | | | Not determined | | 16 | 1 | 30066977 | Mouse | 10412289 | Ppsl_m | plasma P-selectin levels (mouse) | | | Not determined | | 16 | 1 | 30814572 | Mouse | 27095908 | Scvln7_m | sacral vertebrae length 2, 5 week (mouse) | | | | | 16 | 3317864 | 39820362 | Mouse | 27226768 | Tibl9_m | tibia length 9, 5 week (mouse) | | | | | 16 | 3317864 | 51420363 | Mouse | 27226785 | Feml12_m | femur length 12, 5 week (mouse) | | | | | 16 | 3317864 | 64620363 | Mouse | 26884432 | Zlq7_m | zygomatic length QTL 7, 10 week (mouse) | | | | | 16 | 3817864 | 64620363 | Mouse | 38501069 | Tip4_m | tuberculosis immunophenotype 4, IFN-g level (mouse) | | | | | 16 | 4317864 | 44520363 | Mouse | 1301443 | Mopkd2_m | modifier of polycystic kidney disease progression 2 (mouse) | | | Not determined | | 16 | 4646314 | 38646414 | Mouse | 1300656 | Bgeq15_m | body growth early QTL 15 (mouse) | | | Not determined | | 16 | 5775252 | 39775440 | Mouse | 1301945 | Skl7_m | skeletal size (tail length) 7 (mouse) | | | Not determined | | 16 | 5775252 | 39775440 | Mouse | 1300943 | Skts9_m | skin tumor susceptibility 9 (mouse) | | | Not determined | | 16 | 5775252 | 39775440 | Mouse | 1300987 | Skull23_m | skull morphology 23 (mouse) | | | Not determined | | 16 | 5775252 | 39775440 | Mouse | 4141010 | Bbq1_m | brain and behavior QTL 1 (mouse) | | | Not determined | | 16 | 6477009 | 35021216 | Mouse | 1357763 | Lp1_m | lymphocyte proliferation 1 (mouse) | | | Not determined | | 16 | 6542979 | 65466552 | Mouse | 4142460 | Nilac10_m | nicotine induced locomotor activity 10 (mouse) | | | Not determined | | 16 | 7136906 | 29225471 | Mouse | 11251724 | Ewc6_m | ethanol withdrawal and consumption 6 (mouse) | | | | | 16 | 8226052 | 42226052 | Mouse | 26884376 | Skwq4_m | skull length QTL 4, 5 week (mouse) | | | | | 16 | 8417864 | 90896888 | Mouse | 10043978 | Obq35_m | obesity QTL 35 (mouse) | | | Not determined | | 16 | 9881631 | 43881631 | Mouse | 1301086 | Lprm5_m | lymphoproliferation modifier 5 (mouse) | | | Not determined | | 16 | 11848824 | 45848923 | Mouse | 1301841 | Lrnx9_m | learning-contextual 9 (mouse) | | | Not determined | | 16 | 12225360 | 46225471 | Mouse | 10045614 | Rapop6_m | radiation-induced apoptosis 6 (mouse) | | | Not determined | | 16 | 14802921 | 48803032 | Mouse | 4142236 | Pstc4_m | periosteal circumference 4 (mouse) | | | Not determined | | 16 | 15522909 | 49523112 | Mouse | 11565820 | Vasr1_m | variability in acoustic startle response 1 (mouse) | | | | | 16 | 19698657 | 26368664 | Mouse | 1357517 | Bwtn1_m | body weight at necropsy 1 (mouse) | | | Not determined | | 16 | 20019329 | 85600826 | Mouse | 1300534 | Bmd15_m | bone mineral density 15 (mouse) | | | Not determined | | 16 | 21938383 | 55938574 | Mouse | |
Expression
Sequence
RefSeq Acc Id: |
ENSMUST00000231692 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 22,693,733 - 22,713,136 (-) | Ensembl | GRCm38.p6 Ensembl | 16 | 22,874,983 - 22,894,386 (-) | Ensembl |
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RefSeq Acc Id: |
ENSMUST00000243802 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 22,699,273 - 22,713,131 (-) | Ensembl |
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RefSeq Acc Id: |
ENSMUST00000244008 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 22,694,569 - 22,705,862 (-) | Ensembl |
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RefSeq Acc Id: |
ENSMUST00000244583 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 16 | 22,693,734 - 22,705,830 (-) | Ensembl |
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RefSeq Acc Id: |
NR_110508 |
RefSeq Status: |
VALIDATED |
Type: |
NON-CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 | 16 | 22,693,733 - 22,713,136 (-) | NCBI | GRCm38 | 16 | 22,874,983 - 22,894,386 (-) | NCBI | Celera | 16 | 23,435,307 - 23,454,711 (-) | NCBI |
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Sequence: |
AAAGCATGGCAAGTGGTCTCCAGTGTGTCAACTTCCATCTCATACACCACTCCGAAGGGCCGCT GTGGAGCCGGACAGAAGGGAGAGGGAAAGTCTGACCAGTAAAGAGTATCACACCCCCGTCTCCT GCTGGCTTCTCCATCACCCTTTGCCAACTTCAAGTTCTGGGTGGAGATTTGCACACACAGCAGA TGAGGTGGGACTTTGACCCAGTGTTAGAAACTCCCCAGACAGAATGAATACCAGAAAGGAGGAC TCTTGGGGAAGCGGTGATGGATGAGACAGCAGCAATGTTTGAAAGCAAAGCATGTCTACGGACA AGATGCAGTGTGCTCCGGGTAGTATGGCTTTCGGCAAAGCATGTTGGGAAGGAGACACTGTGAA GAGGGGGCTGTCCCATCATCGGAAACATGAAGTTCTAACCCCAAGGCTCCCTGAGGGGAAGCAG CTTCTCCTGTCACCGTGTCACAGGGTAACTGGATCTAAATGAACCTCTCCACACACCCCTGAGG GCATGACTGACAGGGCTGGGTGGAACTGGCTTGTCAATCTGGAGAATTTCATGACAAAATCCAT GACTTGGTTTCAGTTCTTTGGCAGCAACTTGTTCAGTTTAGGATGAAAATCTGCCTCAGCAAAC ACAGTGTTCAGATTACAGTGCAGGGGCAGAGACAAGGTTGCCCAGTGGAAGGACTAACACAGTG TATCTGCCTGGAATGAGAGACACTAATTACAGCTCTTTTCTCCCGTGTTGACCGAGGCAGCCTG GGTCTAGACCCACTGTCTACAGAAACACACTGTGAACTGCAAATGTGCTTTAGCAAATTTAGTA GTCACATTTTGAAAAGTTTTAAAATAATCTTAGGTGAATTCTAATAGTATATTCTCTTTGTAAA ACTGTACTTTACCCGACATAAAATAGTATTATTGTCATATAATGTAAGAACCGAGATTTTTACA TCTTACAGTTAAATCTTCACAATCCAGTGTAAAGAAGCAGGGGATATAGATCAACTGGCAAAGC GCTTGCCTAGGATGCACAAAGCCCTGGAGTTGACTGCCATTACTAGTGACCTGGGCATGGCCTG GCAGGTGGAAACCAAAGGTTCTTGCTCAAGGCTGGACTAGCGAGTTTGAGACCAGCTGGGCTAC ATGAGACCCCGACTCTAAAACAAACATCCAATTTTGTACTTCATTATAGCATCTCTTGAACCAC ACATGGCCATACCTCCCTCAGGCACTCAGTCTTCCAGGGAGACTGTCTTATGTTATTCTTAGCT GCTTTAATAGGGGGCATGTGCTTATTATACCATTCAGAAGTATTTTGTCTCTCAGTGGTCTGGG GTTTTAATTTTTTATTCCATTTATTTGCTTATGCTGTTGGGGGAGGGTATATGCAAGGTTTTCT TATGGATAACGTGGAAGAACTGGTCCTCTCCTTCTCCGGTGTGGATCTCAGGCATGGAACTTAG GTAGTCAGGCTTGGCAGCAGGTGCCCATTACCCACCGAACCATCTTCCTGTCTGGGTCTGGGCT TTTGACATAACATCTACACAGGAACTGTACTGATGCTCACTGTCTGTGACCTTATTCAAGCCTT GATCACAAGTACTGGTGCAATTGTGGTGTGAAAAATACTGGAATTTCAGGATGTGAACATTAGG TAACTGTTTTTCTTTCTTATTTCCTGGAGTCATTGAACATACTTGCTTTTTCAGCTCATCACTA GAACTAAACTTTTATTAAAAAAGAAAATTCTTTCTACCTCC
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Promoters
RGD ID: | 15094666 |
Promoter ID: | EPDNEWNC_M2574 |
Type: | initiation region |
Name: | Gm30505_1 |
Description: | predicted gene, 30505 [Source:MGI Symbol;Acc:MGI:5589664] |
SO ACC ID: | SO:0000170 |
Source: | EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/) |
Experiment Methods: | Single-end sequencing. |
Position: | Mouse Assembly | Chr | Position (strand) | Source |
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GRCm38 | 16 | 22,894,387 - 22,894,447 | EPDNEWNC |
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Additional Information
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