Gm15030 (predicted gene 15030) - Rat Genome Database

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Gene: Gm15030 (predicted gene 15030) Mus musculus
Analyze
Symbol: Gm15030
Name: predicted gene 15030
RGD ID: 9643401
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X22,310,520 - 22,313,000 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX22,312,295 - 22,312,778 (+)EnsemblGRCm39 Ensembl
GRCm38X22,444,281 - 22,446,761 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX22,446,056 - 22,446,539 (+)EnsemblGRCm38mm10GRCm38
CeleraX20,550,306 - 20,552,786 (+)NCBICelera
Cytogenetic MapXA2NCBI
cM MapX17.0NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm15030
42 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:149
Count of miRNA genes:139
Interacting mature miRNAs:142
Transcripts:ENSMUST00000119804
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302195Pbwg10_mpostnatal body weight growth 10 (mouse)Not determinedX126202173Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301551Spha1_msperm head anomaly 1 (mouse)Not determinedX1026622539921652Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
1558721Bw1_mbody weight QTL 1 (mouse)Not determinedX2060678347179225Mouse


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide BX548010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000119804
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX22,312,295 - 22,312,778 (+)Ensembl
GRCm38.p6 EnsemblX22,446,056 - 22,446,539 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000083290 Ensembl
MGD MGI:3705338 ENTREZGENE
NCBI Gene Gm15030 ENTREZGENE
PhenoGen Gm15030 PhenoGen