Gm17026 (predicted gene 17026) - Rat Genome Database

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Gene: Gm17026 (predicted gene 17026) Mus musculus
Analyze
No known orthologs.
Symbol: Gm17026
Name: predicted gene 17026
RGD ID: 9639935
MGI Page MGI
Description:
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: uncharacterized protein LOC101056136
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391442,076,610 - 42,082,052 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1442,076,616 - 42,082,005 (-)EnsemblGRCm39 Ensembl
GRCm381442,254,653 - 42,260,095 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1442,254,659 - 42,260,048 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map14BNCBI
cM Map1422.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:17610818  


Genomics

Variants

.
Variants in Gm17026
9 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:176
Count of miRNA genes:156
Interacting mature miRNAs:166
Transcripts:ENSMUST00000166674
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000166674   ⟹   ENSMUSP00000129050
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1442,076,616 - 42,082,005 (-)Ensembl
GRCm38.p6 Ensembl1442,254,659 - 42,260,048 (-)Ensembl
RefSeq Acc Id: NM_001378714   ⟹   NP_001365643
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391442,076,610 - 42,082,052 (-)NCBI
GRCm381442,254,653 - 42,260,095 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001365643 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000129050
  ENSMUSP00000129050.2
Reference Protein Sequences
RefSeq Acc Id: NP_001365643   ⟸   NM_001378714
- UniProtKB: F6VRJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000129050   ⟸   ENSMUST00000166674
Protein Domains
Disks large homolog 5 N-terminal


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:4937853 AgrOrtholog
Ensembl Genes ENSMUSG00000092152 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000166674 ENTREZGENE
  ENSMUST00000166674.2 UniProtKB/TrEMBL
InterPro DUF622 UniProtKB/TrEMBL
MGD MGI:4937853 ENTREZGENE
NCBI Gene Gm17026 ENTREZGENE
PANTHER ENSMUSG00000072602 PROTEIN-RELATED UniProtKB/TrEMBL
  SPEER/SPETEX UniProtKB/TrEMBL
Pfam Takusan UniProtKB/TrEMBL
PhenoGen Gm17026 PhenoGen
UniProt F6VRJ8 ENTREZGENE
  K7N6Z0_MOUSE UniProtKB/TrEMBL