Gm12280 (predicted gene 12280) - Rat Genome Database

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Gene: Gm12280 (predicted gene 12280) Mus musculus
Analyze
Symbol: Gm12280
Name: predicted gene 12280
RGD ID: 9638950
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl1162,455,303 - 62,457,209 (-)EnsemblGRCm39 Ensembl
GRCm381162,564,466 - 62,566,430 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1162,564,477 - 62,566,383 (-)EnsemblGRCm38mm10GRCm38
cM Map1138.47NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:18799693  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:65
Count of miRNA genes:60
Interacting mature miRNAs:65
Transcripts:ENSMUST00000155836
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_388715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000155836
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1162,455,303 - 62,457,209 (-)Ensembl
GRCm38.p6 Ensembl1162,564,477 - 62,566,383 (-)Ensembl
RefSeq Acc Id: XR_388715
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381162,564,466 - 62,566,430 (-)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000085748 Ensembl
MGD MGI:3652011 ENTREZGENE
NCBI Gene Gm12280 ENTREZGENE
PhenoGen Gm12280 PhenoGen