Gm32223 (predicted gene, 32223) - Rat Genome Database

Name: Gm32223
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Gm32223 (predicted gene, 32223) Mus musculus

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Symbol:

Gm32223

Name:

predicted gene, 32223

RGD ID:

9634478

MGI Page

MGI

Description:

Type:

ncrna

RefSeq Status:

MODEL

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	81,695,276 - 81,706,308 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm38	6	81,718,461 - 81,729,327 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
Celera	6	83,723,792 - 83,734,592 (-)	NCBI		Celera
Cytogenetic Map	6	C3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

Genomics

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142271	Egq8_m	early growth QTL 8 (mouse)			Not determined			4503823	96633110	Mouse
1301521	Pas1c_m	pulmonary adenoma susceptibility 1c (mouse)			Not determined		6	71958006	105958152	Mouse
14697704	Stsl4_m	Salmonella typhimurium susceptibility locus 4 (mouse)					6	77076983	89976982	Mouse
10412119	Stv_m	striatal volumne (mouse)			Not determined		6	60026991	100026967	Mouse
1300954	Fcsa1_m	femoral cross-sectional area 1 (mouse)			Not determined		6	71958006	105958152	Mouse
13824985	Alh1_m	amplitude of lateral head displacement 1 (mouse)					6	77976983	96976961	Mouse
4142259	Tabw2_m	tally ho associated body weight 2 (mouse)			Not determined			46912919	136400690	Mouse
25314319	Histh6_m	histamine hypersensitivity 6 (mouse)					6	48696934	125336963	Mouse
12792979	Fbmd2_m	femoral bone mineral density 2, females only (mouse)					6	75026989	115026943	Mouse
1301571	Arrd1_m	age-related retinal degeneration 1 (mouse)			Not determined		6	75521339	92584431	Mouse
4142126	W3q3_m	weight 3 weeks QTL 3 (mouse)			Not determined			4503823	96633110	Mouse
1300674	Nidd3n_m	non-insulin-dependent diabetes mellitus 3 in NSY (mouse)			Not determined		6	75521339	94202936	Mouse
25314320	Histh5_m	histamine hypersensitivity 5 (mouse)					6	48696934	148351498	Mouse
1301254	Skts11_m	skin tumor susceptibility 11 (mouse)			Not determined		6	51156134	85156284	Mouse
1558977	Skmw10_m	skeletal muscle weight 10 (mouse)			Not determined		6	58424566	92424693	Mouse
1300869	Stheal5_m	soft tissue heal 5 (mouse)			Not determined		6	71552042	105552160	Mouse
1302020	Bbaa20_m	B.burgdorferi-associated arthritis 20 (mouse)			Not determined		6	71299605	93441074	Mouse
1300618	Pgia19_m	proteoglycan induced arthritis 19 (mouse)			Not determined		6	45290993	87403016	Mouse
1301962	Eila2_m	ethanol induced locomotor activity 2 (mouse)			Not determined		6	48703490	125333748	Mouse
4141990	Etax6_m	ethanol induced ataxia 6 (mouse)			Not determined			71299605	86252701	Mouse
4141028	Mclr_m	methylcholanthrene lymphoma resistance (mouse)			Not determined			54350411	88356155	Mouse
1301320	Ots1_m	ovarian teratoma susceptibility 1 (mouse)			Not determined		6	75424566	104480516	Mouse
10043972	Obq28_m	obesity QTL 28 (mouse)			Not determined		6	58517416	92517416	Mouse
1300556	Cia6_m	collagen induced arthritis QTL 6 (mouse)			Not determined		6	4464884	87403016	Mouse
1558984	Cplaq9_m	circadian period of locomotor activity 9 (mouse)			Not determined		6	38646560	92584431	Mouse
10412157	Fl1n_m	fatty liver 1 in NSY (mouse)			Not determined		6	45290993	128811995	Mouse
25440480	Moaq2_m	modifier of alien QTL 2 (mouse)					6	3050001	117476961	Mouse
26884414	Bzwq12_m	bi-zygomatic width QTL 12, 16 week (mouse)					6	3400000	139076998	Mouse
10043901	Pfat5_m	predicted fat percentage 5 (mouse)			Not determined		6	75584287	109584431	Mouse
13524522	Bodwtq4_m	body wweight QTL 4 (mouse)					6	76116989	81876987	Mouse
4142361	W10q11_m	weight 10 weeks QTL 11 (mouse)			Not determined			4503823	96633110	Mouse
1301813	Skl3_m	skeletal size (tail length) 3 (mouse)			Not determined		6	70402880	104403016	Mouse
4142232	W6q4_m	weight 6 weeks QTL 4 (mouse)			Not determined			4503823	96633110	Mouse
1357683	Igf1sl1_m	IGF-1 serum levels 1 (mouse)			Not determined		6	52138693	116132228	Mouse
1301876	Bits2_m	bitterness sensitivity 2 (mouse)			Not determined		6	70402880	104403016	Mouse
1357875	Pfat2_m	predicted fat percentage 2 (mouse)			Not determined		6	76440930	110441074	Mouse
15039373	Adip28_m	adiposity 28 (mouse)					6	56285194	90285194	Mouse
15039375	Bw41_m	body weight QTL 41 (mouse)					6	56285194	90285194	Mouse
1301369	Im4_m	immunoregulatory 4 (mouse)			Not determined		6	63461721	97461888	Mouse
10412208	Cypr4_m	cytokine production 4 (mouse)			Not determined		6	75693484	109693678	Mouse
1300650	Bw18_m	body weight QTL 18 (mouse)			Not determined		6	66690851	100691013	Mouse
1301034	Egrm2_m	early growth rate (mouse)			Not determined		6	70402880	104403016	Mouse
14696731	Pairq1_m	P. aeruginosa infection resistance QTL 1 (mouse)					6	81476981	102176961	Mouse
13506930	Recrq9_m	recombination rate in male meiosis QTL 9 (mouse)					6	73476983	134676963	Mouse
10412195	Efw_m	epididymal fat weight (mouse)			Not determined		6	75521339	94202936	Mouse
1301740	Bwq2_m	body weight QTL 2 (mouse)			Not determined		6	60034663	94034782	Mouse
4141376	Dbm1_m	diabetes modifier 1 (mouse)			Not determined		6	78606487	121092347	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XR_377775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC135293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XR_377775

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	81,695,276 - 81,706,308 (-)	NCBI
GRCm38	6	81,718,461 - 81,729,327 (-)	NCBI

Sequence:

show sequence

TTTGTCCCAGGAGGTGGAGTGGGGCAGACACAAAGGATTGCCTCTGGATGGGCCTGTGCATGAG
CACATCCATACCTACACACCATCTTGGGGTTCACAGACCTCCAGTCGAACTTCACTTGTGTTGT
GTGACCTTGCCTGAGATGGCTGCTCTTTTCCAGCCTTAGCCTTTCATCTGTGCACTGTAGATCT
GATGAACATGAGACGGGCAAACTTGCAGGATCCCAGTCACACAGAAGGTAATACATGATTAAAT
CCGAGGCCCAGGCTACTCCTTTCCCCACTTTGGCTATGCAAAGAAGAAGACAACTCAAGAGGAT
GGAAGACTCCTGTTACCTTGGTGTGGCAAGAGAAGGGGCATCTTGCTTGGGTGCTTATGGCTTT
GGCTGACCTCCTTTTAGCCGTTACTGGAGGATGTTTTCTGCTGCATTCTCATCTCTAACTGTGC
CTACCTCATCTACCTGTGCAGCCACAGTCAACCGTCCCCTGAGTAAGCTGTGTTCATGATCAGA
GGCGTCTTCATTTCATCAGAGACACTGCATGCTTAATGTGAAGGCTTGGGCTGTGGAGATTCCA
TCAACAAACACCAACTAATTAAGCAACTGAGCAAACAGGATTCTCTGCTTCTCTTAGAGAATTA
GGCCAAGGCAAACTGTGACATCAAGCGTGTTTCTTGGTGGTGTACTCTCTGGGGTGTATTCTGC
TCCTTTTTCTCTTTTGATAACATTATACAATCCAATCGCTCAGCTTCCTCCTGTAGTTGGCGTC
CTACCTTCTAACCATTTTCCATCCAAGAGGACAGTCCCCCACTTTTCCTGAGGAGTCCTATTTA
TACACAGCTTGGTGCTATTTTCTGTGACTCTGTTTTGAGAAGCTCAAATCCTTGCTCTTGGGTA
TGTCTTCCTTCTCCTGAGTGCCTTTGTCTTCCTCTTAACTCTTGTGCTTAAGCCTATGTTAATA
TTATAATATATCATGAAA

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Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000107419	ENTREZGENE
Ensembl Transcript	ENSMUST00000291452	ENTREZGENE
MGD	MGI:5591382	ENTREZGENE
NCBI Gene	Gm32223	ENTREZGENE
PhenoGen	Gm32223	PhenoGen

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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