Gm13598 (predicted gene 13598) - Rat Genome Database

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Gene: Gm13598 (predicted gene 13598) Mus musculus
Analyze
Symbol: Gm13598
Name: predicted gene 13598
RGD ID: 9631851
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl266,987,990 - 67,025,079 (-)EnsemblGRCm39 Ensembl
GRCm38267,157,632 - 67,194,734 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl267,157,646 - 67,194,735 (-)EnsemblGRCm38mm10GRCm38
cM Map239.31NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:155
Count of miRNA genes:148
Interacting mature miRNAs:153
Transcripts:ENSMUST00000147939
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_374610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK076676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000147939
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl266,987,990 - 67,025,079 (-)Ensembl
GRCm38.p6 Ensembl267,157,646 - 67,194,735 (-)Ensembl
RefSeq Acc Id: XR_374610
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38267,157,632 - 67,194,734 (-)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000086908 Ensembl
MGD MGI:3649281 ENTREZGENE
NCBI Gene Gm13598 ENTREZGENE
PhenoGen Gm13598 PhenoGen