Gm31831 (predicted gene, 31831) - Rat Genome Database

Name: Gm31831
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Gm31831 (predicted gene, 31831) Mus musculus

Analyze

Symbol:

Gm31831

Name:

predicted gene, 31831

RGD ID:

9631532

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

MODEL

Previously known as:

Gm42831

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	10,352,353 - 10,407,204 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	10,299,059 - 10,399,375 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	10,302,386 - 10,357,237 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	10,249,092 - 10,349,408 (+)	Ensembl	GRCm38		mm10	GRCm38
Celera	5	10,219,634 - 10,272,362 (+)	NCBI		Celera
Cytogenetic Map	5	A1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

Genomics

Variants

Variants in Gm31831
2205 total Variants

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4141234	Pbwg14_m	postnatal body weight growth 14 (mouse)			Not determined		5	1	21273552	Mouse
1301468	Eye1_m	eye weight 1 (mouse)			Not determined		5	1	21929650	Mouse
10412081	Bwq13_m	body weight QTL 13 (mouse)			Not determined		5	1	23606323	Mouse
12904958	Gmmq8_m	gastrocnemius muscle mass QTL 8 (mouse)					5	1	29421124	Mouse
10401122	Pgia41_m	proteoglycan induced arthritis 41 (mouse)			Not determined		5	823144	34823280	Mouse
12738412	Lfibq4_m	liver fibrosis QTL 4 (mouse)					5	3150000	20799180	Mouse
15039371	Nmrs21_m	NAFLD-associated magnetic resonance shift 21 (mouse)					5	3504823	37504823	Mouse
13442491	Mecth1_m	mechanosensation threshold 1 (mouse)					5	4518000	19834998	Mouse
1301806	Actd2_m	activity-distance traveled 2 (mouse)			Not determined		5	5384520	39384652	Mouse
4141207	Imrfq1_m	immune response to Factor IX QTL 1 (mouse)			Not determined		5	8124117	42124239	Mouse
7394748	Mom5_m	modifier of Min 5 (mouse)			Not determined		5	8847672	33475637	Mouse
1301693	Sle6_m	systemic lupus erythematosus susceptibility 6 (mouse)			Not determined		5	8890693	87841837	Mouse
1357478	Kdnw1_m	kidney weight 1 (mouse)			Not determined		5	8915949	40529869	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XR_868247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_868248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_868249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_868250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC118685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000196240

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	10,299,109 - 10,390,744 (+)	Ensembl
GRCm38.p6 Ensembl	5	10,249,142 - 10,340,777 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000198581

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	10,299,059 - 10,399,375 (+)	Ensembl
GRCm38.p6 Ensembl	5	10,249,092 - 10,349,408 (+)	Ensembl

RefSeq Acc Id:

XR_868247

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	10,384,387 - 10,407,204 (+)	NCBI
GRCm38	5	10,334,420 - 10,357,237 (+)	NCBI

Sequence:

show sequence

ATACAATGTGAAGAGTGGTGTCTTTGACTCTTTTGTCTATTCCTGAGATTACTTACCTACTACT
GGGTTGCTGTAGAAATGAGCTAATCTGTGTGCCTTTCATCAGAGGATCAAGGATCTGAGATAGC
TCCTGGGCAGGTGTGTACCTGCACCAGGAACTCAAAGTGGAATAGCCAAAAACAATCCCCTACA
AATGGCACTTAATGTGGAAGAGGTCAGTCGGATGATCCTGGGCCAGAAGGCTGAAGAGTGATGC
TTCAATGTTTTGAAGGACACTGCCTTGACCAATGTTTGAGTTTGAGAAGCTATGTTTGGGGCTT
CCTACATACTCAGGAAATATTTAGTTCTTTCTCAGAGTTCTGATGAGATCTCTGACTCTTGATT
GAAAACTTGGATGAAGACATTCCTATGCACTGAAAGAAGCAGCTTCTCTGAGGTTATCTGAGTA
AGACACTGCTCTGTGCATATAGCAGTATGGCATTGTGGGTCATTTTGTTGCCCCTTTCCTCAGG
AGAATGATAATATTTAGATCCCCTACTTCCCCTGCCCATAACTGATCTCATCTCAGCTTCTTGA
CCAGTTTGGTGTCCATCTTATGAAGTCTTGCACTTAATGTGATGGTGGCCAGCAGCAACTACAT
CTGTAGAACTGTGATAAAACAGGTCTGCTTTATAAATGTAGGAACCACTTCCTCTGAACATTCT
TTCTGCTAACTTCTTTGATCTTCTCCATCCTTCAAGAGAAGATGATGAAGACCGAGATGATTTC
AAGTGCTCTCCTTCATACTTAAGCTGCTAATGCCAGGAAAGACGCAACAAATCGGAATCTTCTG
CGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCAAGAGCGAGAATGGGGAAACCCCATCCCTT
TTAAGGAGAATTATCCTCCGCCTAGGACGTGTCGCTCCCTGATTGGCTGCAGCCCATTGGCCGA
GTTGTCGTCACGGGGAAGGCAGAGCACATGGAGTGGAGAACTACCCTTGGCACATGCGCAGGTA
TTTTTCCCTGACCCAAACTCTTGCGCGCACCTGACTAGACCAGCAAGAACGACACTGCAACAGG
ATCCTTCTGCACACGTTTATTGGGAGAGCTTGATTGCAGAGGCGAAAAGACTTCGAGCCCAGAA
CTGGTGCTGCTTTTATAGGCCTAGGAGAGGCGTGTCTCATACCCGGATTGGTTATGCACTAAGC
CTCATTTGCATGTTCCTCATCTGATTGGCTACTCTCTCTCAGTACCTCACAGAGCCTCATTATC
ATACCTCATTTGCATGTCTCACATCCGATTGGTTACTCTTAGTACCTTACAGAACCTCATTATC
ATACCTGGGCCAGGCAGTGTCTTTGCAAAAAACTTTACTGCATATGTACACATTGGTTGTTTGT
CCAATCTTATGCGTGGTGGCCAGCAGTAGTCAGGGCCACTCAGCAACGGCACATGTGGCTTCCC
ACATCTCCCCCTATTTGCTTTAATAAAATAAGGCTGGACTAGGCCTGTGCAATTATGCCCA

hide sequence

RefSeq Acc Id:

XR_868248

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	10,384,387 - 10,407,198 (+)	NCBI
GRCm38	5	10,334,420 - 10,357,231 (+)	NCBI

Sequence:

show sequence

ATACAATGTGAAGAGTGGTGTCTTTGACTCTTTTGTCTATTCCTGAGATTACTTACCTACTACT
GGGTTGCTGTAGAAATGAGCTAATCTGTGTGCCTTTCATCAGAGGATCAAGGATCTGAGATAGC
TCCTGGGCAGGTGTGTACCTGCACCAGGAACTCAAAGTGGAATAGCCAAAAACAATCCCCTACA
AATGGCACTTAATGTGGAAGAGGTCAGTCGGATGATCCTGGGCCAGAAGGCTGAAGAGTGATGC
TTCAATGTTTTGAAGGACACTGCCTTGACCAATGTTTGAGTTTGAGAAGCTATGTTTGGGGCTT
CCTACATACTCAGGAAATATTTAGTTCTTTCTCAGAGTTCTGATGAGATCTCTGACTCTTGATT
GAAAACTTGGATGAAGACATTCCTATGCACTGAAAGAAGCAGCTTCTCTGAGGTTATCTGAGTC
TTGCACTTAATGTGATGGTGGCCAGCAGCAACTACATCTGTAGAACTGTGATAAAACAGGTCTG
CTTTATAAATGTAGGAACCACTTCCTCTGAACATTCTTTCTGCTAACTTCTTTGATCTTCTCCA
TCCTTCAAGAGAAGATGATGAAGACCGAGATGATTTCAAGTGCTCTCCTTCATACTTAAGCTGC
TAATGCCAGGAAAGACGCAACAAATCGGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTT
CAGGAGCAAGAGCGAGAATGGGGAAACCCCATCCCTTTTAAGGAGAATTATCCTCCGCCTAGGA
CGTGTCGCTCCCTGATTGGCTGCAGCCCATTGGCCGAGTTGTCGTCACGGGGAAGGCAGAGCAC
ATGGAGTGGAGAACTACCCTTGGCACATGCGCAGGTATTTTTCCCTGACCCAAACTCTTGCGCG
CACCTGACTAGACCAGCAAGAACGACACTGCAACAGGATCCTTCTGCACACGTTTATTGGGAGA
GCTTGATTGCAGAGGCGAAAAGACTTCGAGCCCAGAACTGGTGCTGCTTTTATAGGCCTAGGAG
AGGCGTGTCTCATACCCGGATTGGTTATGCACTAAGCCTCATTTGCATGTTCCTCATCTGATTG
GCTACTCTCTCTCAGTACCTCACAGAGCCTCATTATCATACCTCATTTGCATGTCTCACATCCG
ATTGGTTACTCTTAGTACCTTACAGAACCTCATTATCATACCTGGGCCAGGCAGTGTCTTTGCA
AAAAACTTTACTGCATATGTACACATTGGTTGTTTGTCCAATCTTATGCGTGGTGGCCAGCAGT
AGTCAGGGCCACTCAGCAACGGCACATGTGGCTTCCCACATCTCCCCCTATTTGCTTTAATAAA
ATAAGGCTGGACTAGGCCTGTGCAATTA

hide sequence

RefSeq Acc Id:

XR_868249

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	10,384,387 - 10,407,196 (+)	NCBI
GRCm38	5	10,334,420 - 10,357,229 (+)	NCBI

Sequence:

show sequence

ATACAATGTGAAGAGTGGTGTCTTTGACTCTTTTGTCTATTCCTGAGATTACTTACCTACTACT
GGGTTGCTGTAGAAATGAGCTAATCTGTGTGCCTTTCATCAGAGGATCAAGGATCTGAGATAGC
TCCTGGGCAGGTGTGTACCTGCACCAGGAACTCAAAGTGGAATAGCCAAAAACAATCCCCTACA
AATGGCACTTAATGTGGAAGAGGTCAGTCGGATGATCCTGGGCCAGAAGGCTGAAGAGTGATGC
TTCAATGTTTTGAAGGACACTGCCTTGACCAATGTTTGAGTTTGAGAAGCTATGTTTGGGGCTT
CCTACATACTCAGGAAATATTTAGTTCTTTCTCAGAGTTCTGATGAGGTCTTGCACTTAATGTG
ATGGTGGCCAGCAGCAACTACATCTGTAGAACTGTGATAAAACAGGTCTGCTTTATAAATGTAG
GAACCACTTCCTCTGAACATTCTTTCTGCTAACTTCTTTGATCTTCTCCATCCTTCAAGAGAAG
ATGATGAAGACCGAGATGATTTCAAGTGCTCTCCTTCATACTTAAGCTGCTAATGCCAGGAAAG
ACGCAACAAATCGGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCAAGAGCG
AGAATGGGGAAACCCCATCCCTTTTAAGGAGAATTATCCTCCGCCTAGGACGTGTCGCTCCCTG
ATTGGCTGCAGCCCATTGGCCGAGTTGTCGTCACGGGGAAGGCAGAGCACATGGAGTGGAGAAC
TACCCTTGGCACATGCGCAGGTATTTTTCCCTGACCCAAACTCTTGCGCGCACCTGACTAGACC
AGCAAGAACGACACTGCAACAGGATCCTTCTGCACACGTTTATTGGGAGAGCTTGATTGCAGAG
GCGAAAAGACTTCGAGCCCAGAACTGGTGCTGCTTTTATAGGCCTAGGAGAGGCGTGTCTCATA
CCCGGATTGGTTATGCACTAAGCCTCATTTGCATGTTCCTCATCTGATTGGCTACTCTCTCTCA
GTACCTCACAGAGCCTCATTATCATACCTCATTTGCATGTCTCACATCCGATTGGTTACTCTTA
GTACCTTACAGAACCTCATTATCATACCTGGGCCAGGCAGTGTCTTTGCAAAAAACTTTACTGC
ATATGTACACATTGGTTGTTTGTCCAATCTTATGCGTGGTGGCCAGCAGTAGTCAGGGCCACTC
AGCAACGGCACATGTGGCTTCCCACATCTCCCCCTATTTGCTTTAATAAAATAAGGCTGGACTA
GGCCTGTGCAAT

hide sequence

RefSeq Acc Id:

XR_868250

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	10,352,353 - 10,407,196 (+)	NCBI
GRCm38	5	10,302,386 - 10,357,229 (+)	NCBI

Sequence:

show sequence

TATGACTAGCTGCCTCATGTTCCAGACAGGACTCCTTCCCAGACACTTAGAACTGCATTCTCAA
ACTGAGAGCCAAAGCAAACATCTCTCTCTTGAAGGTCTTGCACTTAATGTGATGGTGGCCAGCA
GCAACTACATCTGTAGAACTGTGATAAAACAGGTCTGCTTTATAAATGTAGGAACCACTTCCTC
TGAACATTCTTTCTGCTAACTTCTTTGATCTTCTCCATCCTTCAAGAGAAGATGATGAAGACCG
AGATGATTTCAAGTGCTCTCCTTCATACTTAAGCTGCTAATGCCAGGAAAGACGCAACAAATCG
GAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCAAGAGCGAGAATGGGGAAAC
CCCATCCCTTTTAAGGAGAATTATCCTCCGCCTAGGACGTGTCGCTCCCTGATTGGCTGCAGCC
CATTGGCCGAGTTGTCGTCACGGGGAAGGCAGAGCACATGGAGTGGAGAACTACCCTTGGCACA
TGCGCAGGTATTTTTCCCTGACCCAAACTCTTGCGCGCACCTGACTAGACCAGCAAGAACGACA
CTGCAACAGGATCCTTCTGCACACGTTTATTGGGAGAGCTTGATTGCAGAGGCGAAAAGACTTC
GAGCCCAGAACTGGTGCTGCTTTTATAGGCCTAGGAGAGGCGTGTCTCATACCCGGATTGGTTA
TGCACTAAGCCTCATTTGCATGTTCCTCATCTGATTGGCTACTCTCTCTCAGTACCTCACAGAG
CCTCATTATCATACCTCATTTGCATGTCTCACATCCGATTGGTTACTCTTAGTACCTTACAGAA
CCTCATTATCATACCTGGGCCAGGCAGTGTCTTTGCAAAAAACTTTACTGCATATGTACACATT
GGTTGTTTGTCCAATCTTATGCGTGGTGGCCAGCAGTAGTCAGGGCCACTCAGCAACGGCACAT
GTGGCTTCCCACATCTCCCCCTATTTGCTTTAATAAAATAAGGCTGGACTAGGCCTGTGCAAT

hide sequence

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000105157	Ensembl
MGD	MGI:5590990	ENTREZGENE
NCBI Gene	Gm31831	ENTREZGENE
PhenoGen	Gm31831	PhenoGen

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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