Gm12622 (predicted gene 12622) - Rat Genome Database

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Gene: Gm12622 (predicted gene 12622) Mus musculus
Analyze
Symbol: Gm12622
Name: predicted gene 12622
RGD ID: 9630768
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl1160,451,750 - 60,452,131 (-)EnsemblGRCm39 Ensembl
GRCm381160,558,553 - 60,566,514 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1160,560,924 - 60,561,305 (-)EnsemblGRCm38mm10GRCm38
Celera1165,859,786 - 65,860,331 (+)NCBICelera
Cytogenetic Map11B2NCBI
cM Map1137.81NCBI


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:99
Count of miRNA genes:96
Interacting mature miRNAs:98
Transcripts:ENSMUST00000177975
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_388701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_394054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000177975
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1160,451,750 - 60,452,131 (-)Ensembl
GRCm38.p6 Ensembl1160,560,924 - 60,561,305 (-)Ensembl
RefSeq Acc Id: XR_388701
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381160,560,359 - 60,566,600 (-)NCBI
RefSeq Acc Id: XR_394054
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
Celera1165,859,786 - 65,860,331 (+)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000096745 Ensembl
MGD MGI:3649877 ENTREZGENE
NCBI Gene Gm12622 ENTREZGENE
PhenoGen Gm12622 PhenoGen