Gm36787 (predicted gene, 36787) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Gm36787 (predicted gene, 36787) Mus musculus
Analyze
Symbol: Gm36787
Name: predicted gene, 36787
RGD ID: 9628333
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: uncharacterized protein Gm36787
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39193,762,657 - 3,794,429 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl193,762,844 - 3,794,436 (-)EnsemblGRCm39 Ensembl
GRCm38193,712,657 - 3,744,429 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl193,713,044 - 3,719,573 (-)EnsemblGRCm38mm10GRCm38
Celera193,591,754 - 3,623,591 (-)NCBICelera
Cytogenetic Map19ANCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14610273   PMID:18799693  


Genomics

Variants

.
Variants in Gm36787
783 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122371338Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132340234Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1300776Lfp3_mlong free running period 3 (mouse)Not determined19120328703Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
4142161Drinksac2_mdrink saccharin 2 (mouse)Not determined120695286Mouse
1357819Tgct2_mtesticular germ cell tumor 2 (mouse)Not determined19332855120539663Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000237981
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,762,844 - 3,769,931 (-)Ensembl
GRCm38.p6 Ensembl193,713,044 - 3,719,573 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265107
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,762,853 - 3,794,384 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265108
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,762,852 - 3,793,417 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265109
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,493 - 3,794,436 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265110
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,495 - 3,794,422 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265111
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,498 - 3,794,386 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265112
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,495 - 3,793,752 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265113
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,495 - 3,793,615 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265114
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,495 - 3,793,419 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265115
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,497 - 3,793,077 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265116
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,498 - 3,792,954 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265117
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,772,676 - 3,793,086 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265118
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,776,004 - 3,793,485 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265119
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,762,848 - 3,769,777 (-)Ensembl
Ensembl Acc Id: ENSMUST00000265120
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,762,848 - 3,769,768 (-)Ensembl
RefSeq Acc Id: XR_003952877
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39193,762,657 - 3,794,429 (-)NCBI
GRCm38193,712,657 - 3,744,429 (-)NCBI
Sequence:
RefSeq Acc Id: XR_388282
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39193,772,497 - 3,794,429 (-)NCBI
GRCm38193,722,646 - 3,744,429 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000117739 Ensembl
MGD MGI:5595946 ENTREZGENE
NCBI Gene Gm36787 ENTREZGENE
PhenoGen Gm36787 PhenoGen