Gm32772 (predicted gene, 32772) - Rat Genome Database

Name: Gm32772
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Gm32772 (predicted gene, 32772) Mus musculus

Analyze

Symbol:

Gm32772

Name:

predicted gene, 32772

RGD ID:

9628262

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

MODEL

Previously known as:

Gm45035

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	17,021,443 - 17,100,463 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	17,021,603 - 17,105,552 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	17,287,518 - 17,366,538 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	17,287,678 - 17,371,627 (-)	Ensembl	GRCm38		mm10	GRCm38
Cytogenetic Map	7	A2	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

Genomics

Variants

Variants in Gm32772
2928 total Variants

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301177	Vent3_m	ventricular size 3 (mouse)			Not determined		7	1	20511925	Mouse
10054067	Sle20_m	systematic lupus erythematosus susceptibility 20 (mouse)			Not determined		7	1	20511925	Mouse
1302188	Lxw6_m	lupus BXSB x NZW 6 (mouse)			Not determined		7	1	21698146	Mouse
12904941	Edlmmq6_m	extensor digitorum longus muscle mass QTL 6 (mouse)					7	1	21821047	Mouse
12904948	Tammq5_m	tibialis anterior muscle mass QTL 5 (mouse)					7	1	21821047	Mouse
12904953	Gmmq5_m	gastrocnemius muscle mass QTL 5 (mouse)					7	1	21821047	Mouse
1301572	Sluc30_m	susceptibility to lung cancer 30 (mouse)			Not determined		7	2431696	36431844	Mouse
1301115	Lrdm1_m	lymphoproliferation (Fas) renal disease modifier 1 (mouse)			Not determined		7	3352048	24879418	Mouse
1300722	Sle3_m	systemic lupus erythmatosus susceptibility 3 (mouse)			Not determined		7	3511728	87142720	Mouse
38501068	Tip1_m	tuberculosis immunophenotype 1, spleen CFU (mouse)					7	3602999	72549748	Mouse
25314307	Mlh1fc2_m	MLH1 foci count 2 (mouse)					7	6502999	133501729	Mouse
12792978	Fbmd3_m	femoral bone mineral density 3, females only (mouse)					7	7050288	142367832	Mouse
1357699	Nhdlq6_m	non-HDL QTL 6 (mouse)			Not determined		7	9988867	43988984	Mouse
1558893	Spir1_m	Streptococcus pneumoniae infection resistance 1 (mouse)			Not determined		7	10305798	44305936	Mouse
10449139	Eosn1_m	eosinophil differential 1 (mouse)					7	12480877	46480877	Mouse
10449158	Eosn3_m	eosinophil differential 3 (mouse)					7	12480877	46480877	Mouse
4141566	Femwf8_m	femur work to failure 8 (mouse)			Not determined			13032485	47032621	Mouse
11522751	Cocia17_m	cocaine-induced activity, QTL 17 (mouse)					7	13135204	47135204	Mouse
25314314	Sccor1_m	synaptonemal complex length to mean MLH1 count ratio 1 (mouse)					7	13333925	47349748	Mouse
1559016	Drsi_m	DCC-related Spp1 induction (mouse)			Not determined		7	16637293	49159331	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XR_001778050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001778051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001778052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_003946722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_881841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_881842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_881843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_881844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_881845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_881846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC151601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC152074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000205898

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	17,048,332 - 17,097,697 (-)	Ensembl
GRCm38.p6 Ensembl	7	17,314,407 - 17,363,772 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000206616

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	17,048,253 - 17,097,697 (-)	Ensembl
GRCm38.p6 Ensembl	7	17,314,328 - 17,363,772 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000207022

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	7	17,021,603 - 17,105,552 (-)	Ensembl
GRCm38.p6 Ensembl	7	17,287,678 - 17,371,627 (-)	Ensembl

RefSeq Acc Id:

XR_001778050

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,100,463 (-)	NCBI
GRCm38	7	17,287,647 - 17,366,538 (-)	NCBI

Sequence:

show sequence

TTAATACTCAGGAATAAATTTGGCGTGATAAAATCTCCATTCTCCTATTGATCATTTGTAACTT
TTAGGACAACCACAGGTGGTATAATGGGGCTGCCAAAGTAGCGAACCCTGGGATCCAGAGTCCA
CAGAATCCCACAGTCCCCAGGAATTCTCTTACCTGATTGAACCAGCATCAGATGATGTTCTGCC
AGCATTATTTTTTGTAATTCTAAAATCTGCATTCTGCTATTGATCATTTGTAACTTTTTGGACA
TCCACAGCTAAGTAACCATACCATTATGATACTCCTGTGAGCTGCCTACGTTCTACAACCACAG
CTCTCTGATAACTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTTGCTCAGGGGTGGAGCTTC
CTGTTCATTCGTTCTGCCACGCCC

hide sequence

RefSeq Acc Id:

XR_001778051

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,100,463 (-)	NCBI
GRCm38	7	17,287,647 - 17,366,538 (-)	NCBI

Sequence:

show sequence

TTAATACTCAGGAATAAATTTGGCGTGATAAAATCTCCATTCTCCTATTGATCATTTGTAACTT
TTAGGACAACCACAGGTGGTATAATGGGGCTGCCAAAGTAGCGAACCCTGGGATCCAGAGTCCA
CAGAATCCCACAGTCCCCAGGAATTCTCTTACCTGGTGAGTTGTGGTTGGGATTGAACCAGCAT
CAGATGATGTTCTGCCAGCATTATTTTTTGTAATTCTAAAATCTGCATTCTGCTATTGATCATT
TGTAACTTTTTGGACATCCACAGCTAAGTAACCATACCATTATGATACTCCTGTGAGCTGCCTA
CGTTCTACAACCACAGCTCTCTGATAACTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTTGC
TCAGGGGTGGAGCTTCCTGTTCATTCGTTCTGCCACGCCC

hide sequence

RefSeq Acc Id:

XR_001778052

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,100,463 (-)	NCBI
GRCm38	7	17,287,647 - 17,366,538 (-)	NCBI

Sequence:

show sequence

TTAATACTCAGGAATAAATTTGGCGTGATAAAATCTCCATTCTCCTATTGATCATTTGTAACTT
TTAGGACAACCACAGGTGGTATAATGGGGCTGCCAAAGTAGCGAACCCTGGGATCCAGAGTCCA
CAGAATCCCACAGTCCCCAGGAATTCTCTTACCTGCCACCAGAAGGTCATCTACATATTGCAAA
AGAGTACCTGGGGGATTGTTGGCCCAGAAAGAGGCAAGATCATGATGTAGAGCTTCATCAAACA
AGCTAAAATCTGCATTCTGCTATTGATCATTTGTAACTTTTTGGACATCCACAGCTAAGTAACC
ATACCATTATGATACTCCTGTGAGCTGCCTACGTTCTACAACCACAGCTCTCTGATAACTGTAG
TCTCCCCTCCCCCAGCCTGAAACCTGCTTGCTCAGGGGTGGAGCTTCCTGTTCATTCGTTCTGC
CACGCCC

hide sequence

RefSeq Acc Id:

XR_003946722

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,443 - 17,062,725 (-)	NCBI
GRCm38	7	17,287,518 - 17,328,800 (-)	NCBI

Sequence:

show sequence

GCTGCTTTGCAAACAATAGGTCTAGAGTCTTCTTGACACAGTATTTCCATACAATAGTTCTGCC
ACTTGAAGAAATGACCTCCAGTGTGTTCTTCGCAGCTGTTGTATCCAAGCTTATCCTGTCTAGC
CAGAGTCGTCCTTCCTTAATACTCAGGAATAAATTTGGCGTGATAGAACCACCACCAGATGAAA
TTATTTTTCTGCCACCACCAGTTGATGTAATTGTGGTATAATGGGGCTGCCAAAGTAGCGAACC
CTGGGATCCAGAGTCCACAGAATCCCACAGTCCCCAGGAATTCTCTTACCTGATTGAACCAGCA
TCAGATGATGTTCTGCCAGCATTATTTTTTGTAATTCTAAAATCTGCATTCTGCTATTGATCAT
TTGTAACTTTTTGGACATCCACAGCTAAGTAACCATACCATTATGATACTCCTGTGAGCTGCCT
ACGTTCTACAACCACAGCTCTCTGATAACTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTTG
CTCAGGGGTGGAGCTTCCTGTTCATTCGTTCTGCCACGCCCACTGCTGGAACCTGTGGAGCCAC
ACACGTGCACCTTTCTACTGGACCAGAGATTATTCGGTGGGAATCGGGTCTCCTCCCCCTTCCT
TCATAACTAGTGTCGCAACAATAAAATTTGAGCCTTGATCAG

hide sequence

RefSeq Acc Id:

XR_881841

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,062,716 (-)	NCBI
GRCm38	7	17,287,647 - 17,328,791 (-)	NCBI

Sequence:

show sequence

CAAACAATAGGTCTAGAGTCTTCTTGACACAGTATTTCCATACAATAGTTCTGCCACTTGAAGA
AATGACCTCCAGTGTGTTCTTCGCAGCTGTTGTATCCAAGCTTATCCTGTCTAGCCAGAGTCGT
CCTTCCTTAATACTCAGGAATAAATTTGGCGTGATAGAACCACCACCAGATGAAATTATTTTTC
TGCCACCACCAGTTGATGTAATTGTGGTATAATGGGGCTGCCAAAGTAGCGAACCCTGGGATCC
AGAGTCCACAGAATCCCACAGTCCCCAGGAATTCTCTTACCTGCCACCAGAAGGTCATCTACAT
ATTGCAAAAGAGTACCTGGGGGATTGTTGGCCCAGAAAGAGGCAAGATCATGATGTAGAGCTTC
ATCAAACAAGATTGAACCAGCATCAGATGATGTTCTGCCAGCATTATTTTTTGTAATTCTAAAA
TCTGCATTCTGCTATTGATCATTTGTAACTTTTTGGACATCCACAGCTAAGTAACCATACCATT
ATGATACTCCTGTGAGCTGCCTACGTTCTACAACCACAGCTCTCTGATAACTGTAGTCTCCCCT
CCCCCAGCCTGAAACCTGCTTGCTCAGGGGTGGAGCTTCCTGTTCATTCGTTCTGCCACGCCC

hide sequence

RefSeq Acc Id:

XR_881842

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,100,463 (-)	NCBI
GRCm38	7	17,287,647 - 17,366,538 (-)	NCBI

Sequence:

show sequence

TTAATACTCAGGAATAAATTTGGCGTGATAAAATCTCCATTCTCCTATTGATCATTTGTAACTT
TTAGGACAACCACAGGTGGTATAATGGGGCTGCCAAAGTAGCGAACCCTGGGATCCAGAGTCCA
CAGAATCCCACAGTCCCCAGGAATTCTCTTACCTGCCACCAGAAGGTCATCTACATATTGCAAA
AGAGTACCTGGGGGATTGTTGGCCCAGAAAGAGGCAAGATCATGATGTAGAGCTTCATCAAACA
AGATTGAACCAGCATCAGATGATGTTCTGCCAGCATTATTTTTTGTAATTCTAAAATCTGCATT
CTGCTATTGATCATTTGTAACTTTTTGGACATCCACAGCTAAGTAACCATACCATTATGATACT
CCTGTGAGCTGCCTACGTTCTACAACCACAGCTCTCTGATAACTGTAGTCTCCCCTCCCCCAGC
CTGAAACCTGCTTGCTCAGGGGTGGAGCTTCCTGTTCATTCGTTCTGCCACGCCC

hide sequence

RefSeq Acc Id:

XR_881843

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,097,746 (-)	NCBI
GRCm38	7	17,287,647 - 17,363,821 (-)	NCBI

Sequence:

show sequence

CAGAATCTTGGGACATTGTTGGCCTGACTGATAGCCACAGACCTCCCCTGTGGAGGCTGTTGGG
GAAGTAACTTCAACAGGAGCCAGGGGTCCAGGACACATGATCTAATGCCTTCCATCCCATATAA
AATCTCCATTCTCCTATTGATCATTTGTAACTTTTAGGACAACCACAGGTGGTATAATGGGGCT
GCCAAAGTAGCGAACCCTGGGATCCAGAGTCCACAGAATCCCACAGTCCCCAGGAATTCTCTTA
CCTGCCACCAGAAGGTCATCTACATATTGCAAAAGAGTACCTGGGGGATTGTTGGCCCAGAAAG
AGGCAAGATCATGATGTAGAGCTTCATCAAACAAGATTGAACCAGCATCAGATGATGTTCTGCC
AGCATTATTTTTTGTAATTCTAAAATCTGCATTCTGCTATTGATCATTTGTAACTTTTTGGACA
TCCACAGCTAAGTAACCATACCATTATGATACTCCTGTGAGCTGCCTACGTTCTACAACCACAG
CTCTCTGATAACTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTTGCTCAGGGGTGGAGCTTC
CTGTTCATTCGTTCTGCCACGCCC

hide sequence

RefSeq Acc Id:

XR_881844

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,099,810 (-)	NCBI
GRCm38	7	17,287,647 - 17,365,885 (-)	NCBI

Sequence:

show sequence

TTATTATTCTGCCAGCACCTGTTTTTGTAATTATAAAATCTCCATTCTCCTATTGATCATTTGT
AACTTTTAGGACAACCACAGGTGGTATAATGGGGCTGCCAAAGTAGCGAACCCTGGGATCCAGA
GTCCACAGAATCCCACAGTCCCCAGGAATTCTCTTACCTGCCACCAGAAGGTCATCTACATATT
GCAAAAGAGTACCTGGGGGATTGTTGGCCCAGAAAGAGGCAAGATCATGATGTAGAGCTTCATC
AAACAAGATTGAACCAGCATCAGATGATGTTCTGCCAGCATTATTTTTTGTAATTCTAAAATCT
GCATTCTGCTATTGATCATTTGTAACTTTTTGGACATCCACAGCTAAGTAACCATACCATTATG
ATACTCCTGTGAGCTGCCTACGTTCTACAACCACAGCTCTCTGATAACTGTAGTCTCCCCTCCC
CCAGCCTGAAACCTGCTTGCTCAGGGGTGGAGCTTCCTGTTCATTCGTTCTGCCACGCCC

hide sequence

RefSeq Acc Id:

XR_881845

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,097,753 (-)	NCBI
GRCm38	7	17,287,647 - 17,363,828 (-)	NCBI

Sequence:

show sequence

AGAATTCCAGAATCTTGGGACATTGTTGGCCTGACTGATAGCCACAGACCTCCCCTGTGGAGGC
TGTTGGGGAAGTAACTTCAACAGGAGCCAGGGGTCCAGGACACATGATCTAATGCCTTCCATCC
CATATAAAATCTCCATTCTCCTATTGATCATTTGTAACTTTTAGGACAACCACAGAGAGTCGTC
CTTCCTTAATACTCAGGAATAAATTTGGCGTGATAGAACCACCACCAGATGAAATTATTTTTCT
GCCACCACCAGTTGATGTAATTGTGGTATAATGGGGCTGCCAAAGTAGCGAACCCTGGGATCCA
GAGTCCACAGAATCCCACAGTCCCCAGGAATTCTCTTACCTGCCACCAGAAGGTCATCTACATA
TTGCAAAAGAGTACCTGGGGGATTGTTGGCCCAGAAAGAGGCAAGATCATGATGTAGAGCTTCA
TCAAACAAGATTGAACCAGCATCAGATGATGTTCTGCCAGCATTATTTTTTGTAATTCTAAAAT
CTGCATTCTGCTATTGATCATTTGTAACTTTTTGGACATCCACAGCTAAGTAACCATACCATTA
TGATACTCCTGTGAGCTGCCTACGTTCTACAACCACAGCTCTCTGATAACTGTAGTCTCCCCTC
CCCCAGCCTGAAACCTGCTTGCTCAGGGGTGGAGCTTCCTGTTCATTCGTTCTGCCACGCCC

hide sequence

RefSeq Acc Id:

XR_881846

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	7	17,021,572 - 17,062,713 (-)	NCBI
GRCm38	7	17,287,647 - 17,328,788 (-)	NCBI

Sequence:

show sequence

ACAATAGGTCTAGAGTCTTCTTGACACAGTATTTCCATACAATAGTTCTGCCACTTGAAGAAAT
GACCTCCAGTGTGTTCTTCGCAGCTGTTGTATCCAAGCTTATCCTGTCTAGCCGTGGTATAATG
GGGCTGCCAAAGTAGCGAACCCTGGGATCCAGAGTCCACAGAATCCCACAGTCCCCAGGAATTC
TCTTACCTGCCACCAGAAGGTCATCTACATATTGCAAAAGAGTACCTGGGGGATTGTTGGCCCA
GAAAGAGGCAAGATCATGATGTAGAGCTTCATCAAACAAGATTGAACCAGCATCAGATGATGTT
CTGCCAGCATTATTTTTTGTAATTCTAAAATCTGCATTCTGCTATTGATCATTTGTAACTTTTT
GGACATCCACAGCTAAGTAACCATACCATTATGATACTCCTGTGAGCTGCCTACGTTCTACAAC
CACAGCTCTCTGATAACTGTAGTCTCCCCTCCCCCAGCCTGAAACCTGCTTGCTCAGGGGTGGA
GCTTCCTGTTCATTCGTTCTGCCACGCCC

hide sequence

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000108782	Ensembl
MGD	MGI:5591931	ENTREZGENE
NCBI Gene	Gm32772	ENTREZGENE
PhenoGen	Gm32772	PhenoGen

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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