Gm33340 (predicted gene, 33340) - Rat Genome Database

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Gene: Gm33340 (predicted gene, 33340) Mus musculus
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Symbol: Gm33340
Name: predicted gene, 33340
RGD ID: 9620538
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: Gm40882; predicted gene, 40882
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391243,013,824 - 43,081,000 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1243,013,667 - 43,081,000 (-)EnsemblGRCm39 Ensembl
GRCm381242,967,041 - 43,034,217 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1242,966,884 - 43,034,217 (-)EnsemblGRCm38mm10GRCm38
Celera1244,401,585 - 44,429,325 (-)NCBICelera
Cytogenetic Map12B1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm33340
2484 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12949100443491112Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
14746972Manh72_mmandible shape 72 (mouse)121061528144615281Mouse
10401249Bglu15_mblood glucose level 15 (mouse)Not determined121062064244620809Mouse
13524843Ppiq8_mprepulse inhibition QTL 8 (mouse)121104319450945796Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
4141516slwr_mslowlearner (mouse)Not determined1239247546392614Mouse
13524839Ppiq10_mprepulse inhibition QTL 10 (mouse)121304319554945798Mouse
10043977Obq34_mobesity QTL 34 (mouse)Not determined121514733149147331Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
26884413Bzwq9_mbi-zygomatic width QTL 9, 10 week (mouse)121615000147746783Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
15039339Nmrs29_mNAFLD-associated magnetic resonance shift 29 (mouse)121782585251825852Mouse
10043848Hdlq90_mHDL QTL 90 (mouse)Not determined121783993951840081Mouse
1300870Ath18_matherosclerosis 18 (mouse)Not determined121825996652260067Mouse
12904956Edlmmq10_mextensor digitorum longus muscle mass QTL 10 (mouse)121973983353739833Mouse
1302172Skts5_mskin tumor susceptibility 5 (mouse)Not determined122214886656149016Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122916068563160884Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122916068563160884Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122980158463801733Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122986352263863522Mouse
10402492Dipa8_mdrug induced psychomotor activation 8 (mouse)Not determined123493387268934019Mouse
1300818Bbaa10_mB.burgdorferi-associated arthritis 10 (mouse)Not determined123509100465511019Mouse
12879483Asp1_maudiogenic seizure prone 1 (mouse)123528549646801733Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
13524845Ppiq8a_mprepulse inhibition QTL 8a (mouse)124032341244945796Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_148724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC113204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000219475
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1243,013,861 - 43,081,000 (-)Ensembl
GRCm38.p6 Ensembl1242,967,078 - 43,034,217 (-)Ensembl
RefSeq Acc Id: ENSMUST00000219846
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1243,013,824 - 43,080,965 (-)Ensembl
GRCm38.p6 Ensembl1242,967,041 - 43,034,182 (-)Ensembl
RefSeq Acc Id: ENSMUST00000220044
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1243,013,667 - 43,062,242 (-)Ensembl
GRCm38.p6 Ensembl1242,966,884 - 43,015,459 (-)Ensembl
RefSeq Acc Id: NR_148724
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391243,013,824 - 43,081,000 (-)NCBI
GRCm381242,967,041 - 43,034,217 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000112407 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000219846 ENTREZGENE
MGD MGI:5592499 ENTREZGENE
NCBI Gene Gm33340 ENTREZGENE
PhenoGen Gm33340 PhenoGen
RNAcentral URS0000BC4627 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-11-21 Gm33340  predicted gene, 33340  Gm40882  predicted gene, 40882  Data merged from RGD:10024874 737654 PROVISIONAL