Gm35549 (predicted gene, 35549) - Rat Genome Database
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Gene: Gm35549 (predicted gene, 35549) Mus musculus
Analyze
Symbol: Gm35549
Name: predicted gene, 35549
RGD ID: 9610331
MGI Page MGI
Description: Orthologous to human C3orf86 (chromosome 3 putative open reading frame 86).
Type: protein-coding
RefSeq Status: INFERRED
Also known as: uncharacterized protein C3orf86 homolog; uncharacterized protein Gm35549
RGD Orthologs
Human
Bonobo
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399122,666,718 - 122,673,088 (-)NCBIGRCm39mm39
GRCm389122,837,653 - 122,844,023 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9122,822,776 - 122,844,035 (-)EnsemblGRCm38mm10GRCm38
Celera9123,285,428 - 123,294,700 (-)NCBICelera
Cytogenetic Map9F4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
Gm35549
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399122,666,718 - 122,673,088 (-)NCBIGRCm39mm39
GRCm389122,837,653 - 122,844,023 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9122,822,776 - 122,844,035 (-)EnsemblGRCm38mm10GRCm38
Celera9123,285,428 - 123,294,700 (-)NCBICelera
Cytogenetic Map9F4NCBI
C3orf86
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl344,421,127 - 44,439,946 (-)EnsemblGRCh38hg38GRCh38
GRCh38344,421,132 - 44,439,898 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37344,462,622 - 44,465,517 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map3p21.31NCBI
HuRef344,506,994 - 44,509,886 (-)NCBIHuRef
CHM1_1344,412,735 - 44,415,627 (-)NCBICHM1_1
C3H3orf86
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1345,369,395 - 45,372,111 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0344,310,973 - 44,314,089 (-)NCBIMhudiblu_PPA_v0panPan3
CUNH3orf86
(Chlorocebus sabaeus - African green monkey)
No map positions available.


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001363262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC125374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000203176   ⟹   ENSMUSP00000145415
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9122,837,653 - 122,844,035 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203656   ⟹   ENSMUSP00000144807
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9122,837,653 - 122,844,035 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204619   ⟹   ENSMUSP00000145500
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9122,837,653 - 122,844,035 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207349
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9122,822,776 - 122,843,886 (-)Ensembl
RefSeq Acc Id: NM_001363262   ⟹   NP_001350191
RefSeq Status: INFERRED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399122,666,718 - 122,673,088 (-)NCBI
GRCm389122,837,653 - 122,844,023 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001350191 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001350191   ⟸   NM_001363262
RefSeq Acc Id: ENSMUSP00000144807   ⟸   ENSMUST00000203656
RefSeq Acc Id: ENSMUSP00000145415   ⟸   ENSMUST00000203176
RefSeq Acc Id: ENSMUSP00000145500   ⟸   ENSMUST00000204619


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:5594708 AgrOrtholog
Ensembl Genes ENSMUSG00000107504 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000144807 UniProtKB/TrEMBL
  ENSMUSP00000145415 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000145500 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000203176 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000203656 UniProtKB/TrEMBL
  ENSMUST00000204619 UniProtKB/TrEMBL
MGD MGI:5594708 ENTREZGENE
NCBI Gene Gm35549 ENTREZGENE
PhenoGen Gm35549 PhenoGen
UniProt A0A0N4SUS7_MOUSE UniProtKB/TrEMBL