Gm13383 (predicted gene 13383) - Rat Genome Database

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Gene: Gm13383 (predicted gene 13383) Mus musculus
Analyze
Symbol: Gm13383
Name: predicted gene 13383
RGD ID: 9600908
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3926,260,181 - 6,267,929 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl26,260,757 - 6,262,077 (-)EnsemblGRCm39 Ensembl
GRCm3826,256,863 - 6,263,030 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl26,255,946 - 6,257,266 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map2A1NCBI
cM Map23.62NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in Gm13383
302 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:45
Count of miRNA genes:45
Interacting mature miRNAs:45
Transcripts:ENSMUST00000131190
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045633Heal15_mwound healing/regeneration 15 (mouse)Not determined2121989642Mouse
4141836Tgq11_mtriglyceride QTL 11 (mouse)Not determined125324559Mouse
4142333Tgq10_mtriglyceride QTL 10 (mouse)Not determined125324559Mouse
1301838Sluc16_msusceptibility to lung cancer 16 (mouse)Not determined2126529589Mouse
12904743Carcdq3_mcardiac collagen deposition QTL 3 (mouse)2323494028179150Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000131190
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl26,260,757 - 6,262,077 (-)Ensembl
GRCm38.p6 Ensembl26,255,946 - 6,257,266 (-)Ensembl
RefSeq Acc Id: XR_373972
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3926,260,181 - 6,267,929 (-)NCBI
GRCm3826,256,863 - 6,263,030 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000087485 Ensembl
MGD MGI:3650825 ENTREZGENE
NCBI Gene Gm13383 ENTREZGENE
PhenoGen Gm13383 PhenoGen