Tmem167-ps1 (transmembrane protein 167, pseudogene 1) - Rat Genome Database

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Gene: Tmem167-ps1 (transmembrane protein 167, pseudogene 1) Mus musculus
Analyze
Symbol: Tmem167-ps1
Name: transmembrane protein 167, pseudogene 1
RGD ID: 9597536
MGI Page MGI
Description:
Type: protein-coding (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: Gm28601
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39713,453,496 - 13,454,216 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl713,453,618 - 13,453,831 (-)EnsemblGRCm39 Ensembl
GRCm38713,719,571 - 13,720,291 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl713,719,693 - 13,719,906 (-)EnsemblGRCm38mm10GRCm38
Celera711,336,506 - 11,337,226 (-)NCBICelera
Cytogenetic Map7A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Tmem167-ps1
9 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25394569Skmw57_mskeletal muscle weight 57, gastroc (mouse)7458046916687861Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_036153612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC157361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000191236
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl713,453,618 - 13,453,831 (-)Ensembl
GRCm38.p6 Ensembl713,719,693 - 13,719,906 (-)Ensembl
RefSeq Acc Id: XM_036153612   ⟹   XP_036009505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39713,453,496 - 13,454,216 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_036009505 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_036009505   ⟸   XM_036153612


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000100468 Ensembl
MGD MGI:5579307 ENTREZGENE
NCBI Gene Gm28601 ENTREZGENE
PhenoGen Tmem167-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-05-26 Tmem167-ps1  transmembrane protein 167, pseudogene 1  Gm28601  predicted gene 28601  Symbol and/or name change 5135510 APPROVED