Gm11788 (predicted gene 11788) - Rat Genome Database

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Gene: Gm11788 (predicted gene 11788) Mus musculus
Analyze
Symbol: Gm11788
Name: predicted gene 11788
RGD ID: 9597521
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl11120,380,232 - 120,383,220 (-)EnsemblGRCm39 Ensembl
GRCm3811120,488,534 - 120,491,740 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11120,489,406 - 120,492,394 (-)EnsemblGRCm38mm10GRCm38
Celera11132,223,866 - 132,227,072 (-)NCBICelera
cM Map1184.19NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:18799693   PMID:24316575  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:129
Interacting mature miRNAs:136
Transcripts:ENSMUST00000142520
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000142520
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11120,380,232 - 120,383,220 (-)Ensembl
GRCm38.p6 Ensembl11120,489,406 - 120,492,394 (-)Ensembl
RefSeq Acc Id: XR_389235
Type: NON-CODING
Position: No map positions available.
RefSeq Acc Id: XR_389236
Type: NON-CODING
Position: No map positions available.
RefSeq Acc Id: XR_389237
Type: NON-CODING
Position: No map positions available.
RefSeq Acc Id: XR_393745
Type: NON-CODING
Position: No map positions available.
RefSeq Acc Id: XR_393746
Type: NON-CODING
Position: No map positions available.
RefSeq Acc Id: XR_393747
Type: NON-CODING
Position: No map positions available.
RefSeq Acc Id: XR_864633
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
Celera11132,223,866 - 132,227,072 (-)NCBI
RefSeq Acc Id: XR_880362
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811120,488,534 - 120,491,740 (-)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000086929 Ensembl
MGD MGI:3649943 ENTREZGENE
NCBI Gene Gm11788 ENTREZGENE
PhenoGen Gm11788 PhenoGen