Gm30504 (predicted gene, 30504) - Rat Genome Database

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Gene: Gm30504 (predicted gene, 30504) Mus musculus
Analyze
Symbol: Gm30504
Name: predicted gene, 30504
RGD ID: 9590779
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: Gm45373
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39845,563,523 - 45,796,774 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl845,563,518 - 45,649,578 (+)EnsemblGRCm39 Ensembl
GRCm38845,110,486 - 45,343,736 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl845,110,481 - 45,196,541 (+)EnsemblGRCm38mm10GRCm38
Celera847,797,973 - 47,883,668 (+)NCBICelera
Cytogenetic Map8B1.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm30504
7904 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81550657249506729Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81550657249506729Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81656937350569697Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81832109752321225Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81945501853455150Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81945501853455150Mouse
10043974Obq30_mobesity QTL 30 (mouse)Not determined82658332260583322Mouse
13524525Bodwtq7_mbody wweight QTL 7 (mouse)82824955647027681Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3250657271740637Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
10043990Hbnr12_mHeligmosomoides bakeri nematode resistance 12 (mouse)Not determined83327701651290537Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83429039768290537Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
11041902Lmr10a_mleishmaniasis resistance 10a (mouse)83532109757797633Mouse
11049578Lmr10c_mleishmaniasis resistance 10c (mouse)83532109757797633Mouse
11049577Lmr10b_mleishmaniasis resistance 10b (mouse)83532109757797633Mouse
1301139Lmr10_mleishmaniasis resistance 10 (mouse)Not determined83532109757797633Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84474791478748059Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000209316
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl845,575,688 - 45,649,397 (+)Ensembl
GRCm38.p6 Ensembl845,122,651 - 45,196,360 (+)Ensembl
RefSeq Acc Id: ENSMUST00000209448
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl845,563,518 - 45,578,668 (+)Ensembl
GRCm38.p6 Ensembl845,110,481 - 45,125,631 (+)Ensembl
RefSeq Acc Id: ENSMUST00000209762
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl845,639,778 - 45,649,578 (+)Ensembl
GRCm38.p6 Ensembl845,186,741 - 45,196,541 (+)Ensembl
RefSeq Acc Id: XR_003947541
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39845,575,409 - 45,796,774 (+)NCBI
GRCm38845,122,372 - 45,343,736 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935003
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39845,563,523 - 45,796,774 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004935004
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39845,563,523 - 45,649,563 (+)NCBI
Sequence:
RefSeq Acc Id: XR_870400
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39845,563,523 - 45,796,774 (+)NCBI
GRCm38845,110,486 - 45,343,736 (+)NCBI
Sequence:
RefSeq Acc Id: XR_870401
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39845,563,523 - 45,796,774 (+)NCBI
GRCm38845,110,486 - 45,343,736 (+)NCBI
Sequence:
Promoters
RGD ID:15093434
Promoter ID:EPDNEWNC_M1339
Type:single initiation site
Name:Gm30504_1
Description:predicted gene, 30504 [Source:MGI Symbol;Acc:MGI:5589663]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38845,186,724 - 45,186,784EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000110260 Ensembl
MGD MGI:5589663 ENTREZGENE
NCBI Gene Gm30504 ENTREZGENE
PhenoGen Gm30504 PhenoGen