LOC103692726 (keratin-associated protein 5-9-like) - Rat Genome Database

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Gene: LOC103692726 (keratin-associated protein 5-9-like) Rattus norvegicus
Analyze
Symbol: LOC103692726
Name: keratin-associated protein 5-9-like
RGD ID: 9430186
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC691616; similar to keratin associated protein 5-1
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86137,785,454 - 137,786,242 (-)NCBIGRCr8
mRatBN7.26131,964,378 - 131,965,166 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.06137,692,566 - 137,693,354 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
RGSC_v3.46137,890,365 - 137,891,153 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera6129,502,669 - 129,503,457 (-)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics

Variants

.
Variants in LOC103692726
30 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)6122549046137801795Rat
2293085Iddm29Insulin dependent diabetes mellitus QTL 297.66blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)6122549046140286318Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
2312560Pur20Proteinuria QTL 202.10.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)6125628133137801795Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008764996   ⟹   XP_008763218
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86137,785,454 - 137,786,242 (-)NCBI
mRatBN7.26131,964,378 - 131,965,166 (-)NCBI
Rnor_6.06137,692,566 - 137,693,354 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008763218 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_008763218   ⟸   XM_008764996
- Sequence:


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-35771 BioCyc
NCBI Gene LOC103692726 ENTREZGENE
PhenoGen LOC103692726 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-29 LOC103692726  keratin-associated protein 5-9-like  LOC691616  similar to keratin associated protein 5-1  Data merged from RGD:1597277 737654 PROVISIONAL
2014-08-25 LOC103692726  keratin-associated protein 5-9-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC691616  similar to keratin associated protein 5-1      Symbol and Name status set to provisional 70820 PROVISIONAL