Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: LOC103689964 (vacuolar ATPase assembly integral membrane protein Vma21) Rattus norvegicus
Analyze
Symbol: LOC103689964
Name: vacuolar ATPase assembly integral membrane protein Vma21
Description: Predicted to localize to the ER to Golgi transport vesicle membrane; endoplasmic reticulum-Golgi intermediate compartment membrane; and integral component of membrane. Human ortholog(s) of this gene implicated in X-linked myopathy with excessive autophagy. Orthologous to human VMA21 (vacuolar ATPase assembly factor VMA21); INTERACTS WITH 4-hydroxyphenyl retinamide (ortholog); carbon nanotube (ortholog); propiconazole (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01734,940,424 - 34,946,009 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1734,939,517 - 34,945,317 (-)Ensembl
Cytogenetic Map17p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC103689964
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 9321656
Created: 2014-08-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.