Dnm1 (dynamin 1) - Rat Genome Database

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Gene: Dnm1 (dynamin 1) Chinchilla lanigera
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Symbol: Dnm1
Name: dynamin 1
RGD ID: 9066053
Description: ENCODES a protein that exhibits D2 dopamine receptor binding (ortholog); identical protein binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); endocytosis (ortholog); endosome organization (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Alzheimer's disease (ortholog); cerebellar ataxia (ortholog); childhood onset epileptic encephalopathy (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: dynamin-1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955570752,335 - 781,770 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955570752,335 - 781,770 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

References


Genomics

Comparative Map Data
Dnm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955570752,335 - 781,770 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955570752,335 - 781,770 (+)NCBIChiLan1.0ChiLan1.0
DNM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9128,191,655 - 128,255,248 (+)EnsemblGRCh38hg38GRCh38
GRCh389128,203,379 - 128,255,244 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379130,965,658 - 131,017,523 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369130,005,484 - 130,057,348 (+)NCBINCBI36hg18NCBI36
Build 349128,045,216 - 128,097,081NCBI
Celera9101,616,559 - 101,668,431 (+)NCBI
Cytogenetic Map9q34.11NCBI
HuRef9100,579,095 - 100,630,981 (+)NCBIHuRef
CHM1_19131,116,687 - 131,168,550 (+)NCBICHM1_1
Dnm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,198,483 - 32,243,361 (-)NCBIGRCm39mm39
GRCm39 Ensembl232,198,483 - 32,243,350 (-)Ensembl
GRCm38232,308,471 - 32,353,349 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,308,471 - 32,353,338 (-)EnsemblGRCm38mm10GRCm38
MGSCv37232,163,991 - 32,208,824 (-)NCBIGRCm37mm9NCBIm37
MGSCv36232,130,480 - 32,175,282 (-)NCBImm8
Celera232,012,962 - 32,058,530 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
Dnm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2315,604,782 - 15,648,654 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl311,338,083 - 11,382,043 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0311,338,081 - 11,382,043 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0316,686,951 - 16,730,913 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,434,778 - 11,478,452 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1311,331,147 - 11,374,785 (-)NCBI
Celera310,349,401 - 10,391,382 (-)NCBICelera
Cytogenetic Map3p12NCBI
DNM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19128,008,224 - 128,045,224 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,004,508 - 128,044,690 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0999,324,385 - 99,376,262 (+)NCBIMhudiblu_PPA_v0panPan3
DNM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1955,252,802 - 55,298,244 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl955,252,347 - 55,298,244 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,447,720 - 54,493,024 (-)NCBI
ROS_Cfam_1.0956,174,435 - 56,220,232 (-)NCBI
UMICH_Zoey_3.1954,934,788 - 54,980,303 (-)NCBI
UNSW_CanFamBas_1.0955,249,424 - 55,295,001 (-)NCBI
UU_Cfam_GSD_1.0955,340,932 - 55,386,497 (-)NCBI
Dnm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947196,001,590 - 196,029,515 (+)NCBI
SpeTri2.0NW_00493648715,767,897 - 15,797,722 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1268,653,039 - 268,702,223 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11268,653,045 - 268,702,233 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21302,643,339 - 302,692,544 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,874,098 - 9,927,737 (-)NCBI
ChlSab1.1 Ensembl129,878,966 - 9,927,744 (-)Ensembl
Vero_WHO_p1.0NW_0236660796,308,667 - 6,359,204 (+)NCBI
Dnm1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247606,605,902 - 6,646,575 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000002274   ⟹   ENSCLAP00000002228
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955570752,335 - 781,770 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000002275   ⟹   ENSCLAP00000002229
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955570752,352 - 781,225 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000002276   ⟹   ENSCLAP00000002230
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955570752,353 - 781,225 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000002277   ⟹   ENSCLAP00000002231
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955570752,353 - 780,623 (+)Ensembl
RefSeq Acc Id: XM_013509390   ⟹   XP_013364844
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955570752,335 - 781,770 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013364844 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013364844   ⟸   XM_013509390
- Sequence:
RefSeq Acc Id: ENSCLAP00000002228   ⟸   ENSCLAT00000002274
RefSeq Acc Id: ENSCLAP00000002230   ⟸   ENSCLAT00000002276
RefSeq Acc Id: ENSCLAP00000002229   ⟸   ENSCLAT00000002275
RefSeq Acc Id: ENSCLAP00000002231   ⟸   ENSCLAT00000002277


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000001608 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000002228 ENTREZGENE
Ensembl Transcript ENSCLAT00000002274 ENTREZGENE
NCBI Gene Dnm1 ENTREZGENE