Ric8a (RIC8 guanine nucleotide exchange factor A)

Gene: Ric8a (RIC8 guanine nucleotide exchange factor A) Chinchilla lanigera

Analyze

Symbol:

Ric8a

Name:

RIC8 guanine nucleotide exchange factor A

RGD ID:

9062780

Description:

ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); basement membrane organization (ortholog); cell migration involved in gastrulation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

synembryn-A

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955476	11,827,004 - 11,833,162 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955476	11,827,004 - 11,833,495 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Neoplasms (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ISO)

basement membrane organization (ISO)

cell migration involved in gastrulation (ISO)

cell-cell adhesion involved in gastrulation (ISO)

gastrulation (ISO)

in utero embryonic development (ISO)

response to light stimulus (ISO)

vasculature development (ISO)

visual learning (ISO)

Cellular Component

cytoplasm (ISO)

membrane (ISO)

plasma membrane (ISO)

Molecular Function

G-protein alpha-subunit binding (ISO)

GTPase activator activity (ISO)

guanyl-nucleotide exchange factor activity (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Ric8a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955476	11,827,004 - 11,833,162 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955476	11,827,004 - 11,833,495 (-)	NCBI	ChiLan1.0	ChiLan1.0

RIC8A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	207,708 - 215,113 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	207,708 - 215,113 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	207,708 - 215,113 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	198,530 - 205,113 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	343,749 - 350,332 (-)	NCBI		Celera
Cytogenetic Map	11	p15.5	NCBI
HuRef	11	28,547 - 35,130 (+)	NCBI		HuRef
CHM1_1	11	207,204 - 213,787 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	248,906 - 256,311 (+)	NCBI		T2T-CHM13v2.0

Ric8a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	140,437,310 - 140,443,644 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	140,436,870 - 140,444,285 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	140,857,397 - 140,863,731 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	140,856,957 - 140,864,372 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	148,043,296 - 148,049,630 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	140,708,717 - 140,715,051 (+)	NCBI		MGSCv36	mm8
Celera	7	140,649,681 - 140,656,018 (+)	NCBI		Celera
Cytogenetic Map	7	F4	NCBI
cM Map	7	86.06	NCBI

Ric8a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	205,364,796 - 205,371,102 (+)	NCBI		GRCr8
mRatBN7.2	1	195,935,162 - 195,941,469 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	195,935,349 - 195,941,467 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	204,287,626 - 204,293,929 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	211,414,534 - 211,420,838 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	204,088,386 - 204,094,690 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	213,606,599 - 213,612,905 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	213,606,599 - 213,612,904 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	220,531,948 - 220,538,536 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	201,014,483 - 201,020,790 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	201,164,714 - 201,170,146 (+)	NCBI
Celera	1	193,579,108 - 193,585,413 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

RIC8A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	2,574,819 - 2,582,645 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	1,730,133 - 1,738,008 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	203,317 - 210,135 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	248,881 - 255,274 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	248,880 - 255,269 (+)	Ensembl	panpan1.1		panPan2

RIC8A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	25,363,031 - 25,368,645 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	25,362,875 - 25,368,378 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	25,012,985 - 25,018,594 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	25,889,581 - 25,895,184 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	25,889,427 - 25,902,180 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	25,457,590 - 25,463,198 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	25,102,367 - 25,107,976 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	25,715,214 - 25,720,830 (+)	NCBI		UU_Cfam_GSD_1.0

Ric8a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	57,369 - 62,720 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936888	56,811 - 63,776 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936888	57,212 - 62,722 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RIC8A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	32,215 - 39,360 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	32,135 - 37,682 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	162,187,001 - 162,192,480 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RIC8A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	18,597 - 25,398 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	19,013 - 25,473 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	97,033,852 - 97,040,311 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ric8a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	22,234,484 - 22,240,940 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	22,234,484 - 22,240,874 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005401889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005401890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013502915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01055475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBBH01139853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000007393 ⟹ ENSCLAP00000007279

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955476	11,827,004 - 11,833,162 (-)	Ensembl

RefSeq Acc Id:

XM_005401889 ⟹ XP_005401946

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955476	11,827,006 - 11,833,495 (-)	NCBI

Sequence:

show sequence

TGGTCGAGGGAGGAGTGGGCGTCGGCTCTCGACTTCGTCGGTTGTTTGGGCGCGTTCTTAGTGC
CTGGATGTGACTGTCAGCCAGGCCCTTCCGGTCAGCGGGCGGGGGTGTGCCGGGGAGCTCTCTG
CGCTCGCGCGGCAGTACCCGAGCAGGTCTGAACTGGCGTGATCCGGGCCAGAAAACCGCCTCTG
GAAAGCGGAGATGAGCGCTCAGGACGTTGCATAAAATGCAGGTGTGAAAAATTACGGAAAAATG
AAACAAGGACACATGGAACCGAAAGGGCCTTGAACGGGGCGCGCTTGCAGTAGCGAGTGGGCAG
GCCTCAGGCCAGACTTTACGGCACCAGGTCCCGGAGCCATGGAGCCCCGGGCGGTTGCGGATGT
AGTGGAGACTGGAAAGGAAGATGTGATTGCAGAAGCTCTGAGAACATACAACCAGGAGCATTCG
GAGAGCTTCACCTTTGACGATGCCCAGCAGGAAGATAGAAAGAGACTCGCAAAGCTGCTGGTGT
CTGTCCTGGAGCAGGGCTTGCCACTTTCACACCGTGTCATCTGGCTGCAGACTGTCCGAATCCT
GTCCCGGGACCGGAGCTGCCTGGCTCCATTCACCAGCCGCCAGAGTCTGCACGCATTAGCCTCT
TATGCTGACATATCTGCCTCTGAGGGGTCCCTCCCAGAGGCCTTTGACATGGATGTCATGCTTG
AGTCCCTTAAGTGCTTGTGCAACCTTGTCCTCAGCAGCCCTGTGGCACAAGCACTTGCTGCGGA
GGCCCGCCTGGTGGTGAAGCTTATAGAACGTGTGGGGTTGTATGGCAAGAGAAGCTTCCCCCAT
GAGGTGCAGTTCTTTGACCTGCGGCTCCTCTTTCTGCTAACTGCACTACGCACTGATGTGCGCC
AGCAGCTGTTTCAGGAGCTGCATGGTGTACATGTGTTGACTGATGCACTGGAACTGACGCTAGG
AGTGACTTCTAAAGAGAGTCCCCCTGAAGTCCTTCCTCCCCAAGAGACTGAGCGAATCATGGAG
ATCCTCAAAGTGCTCTTCAACATCACCTTCGACTCTATCAAGAGGGAGGTAGAGGAGGAAGATG
CTGCCCTTTACCAGTACCTGGGGACCCTTTTGCGGCACTGTGTGATGATTGCTGCTGCTGGAGA
CCGCACAGAGGAGTTCCATGGCCACACCGTGAATCTCCTAGGGAATTTGCCCCTCAAGTGCTTG
GATGTCCTTCTCACCCTGGACCTACACGAAGGCTCTTTGGAGTTCATGGGAGTGAACATGGATG
TGATCAGTGTCCTCCTCGCCTTCCTAGAGAAGCGCTTAAATCAGACCCACAGGCTGAAGGAGAG
TGTGGCTCCTGTACTAAGTGTGCTGACTGAGTGTGCCCGCATGCACCGTCCAGCCAGGAAGTTC
CTGAAGGCCCAGGTGTTGCCACCCCTGCGGGATGTAAGGACTCGGCCAGAGGTGGGAGAGCTAC
TTCGGAACAAGCTGGTGCGCCTTATGACACACCTAGACACAGATGTGAAGAGGGTAGCTGCAGA
GTTCCTCTTTGTCCTGTGCTCTGAGAGTGTGCCCCGGTTCATCAAGTACACAGGCTACGGGAAT
GCTGCTGGCCTTCTGGCTGCCAGGGGCCTTATGGCAGGGGGCCGGACTGAGGGGCAGTACTCGG
ATGATGAGGACACAGACACAGATGAGTACAAGGAAGCCAAGGCCAGCATCAACCCAGTGACTGG
CAGGGTAGAAGAGAAGCCACCCAACCCTATGGAGGGTATGACAGAGGAACAAAAGGAGCATGAG
GCCATGAAGCTGGTGAACATGTTTGACAGGCTGTCAAGGCACCGAGTCATCCAGCCCATGGGCA
TGAGTCCCCAGGGTCACCTCACATCCCTGCAAGATGCCGTGTGTGAGACCATGGAGGGGCAGCT
CTCCTCAGACCCGGATTCTGACCCTGACTGAGGATGGTAGTTCCTCTGCTCCACCTTCAGAATT
GGTGCTGCTTCCAGAGACATCCTTGGGGCGGCAGCCTTGGGAAGCCCAGCCCTTCTCTAGCTGG
AGTCCCTTTCTGTACCCCAAGTTCTGTTTATGACTTGCCTCTACTCCTATTTCTTATCTTGTGG
ATTGCAATAGTCTTGTCCTGCTGTAGCTCTGGGAACTTGGCCCTGGTTTCTACAGGTGAGGCTG
GCCTAAGTAGGGAGCATTTATGATATGAGCCCATCTGGGGCTGGCACACTGCATTTCACAGAAG
GGATGTGCTAGAATTTTACCAGTCCATACACTGGATGTCAAGGTAGGCTTCTGTTGTATTTCCA
CCAAACAGGGCTACTCATGCTTCCACATTTCCCTTGGTCCTGCCTTAACCACCCATTACAGTAT
CCACATACCCATGTTCTCACTGGCTATGACATTGTCAATTGAAGAATACCAATCCTACTCACTG
GTTCAGGCTGAATACTTGTATGAAGGAAAATGACCCTACTGAGACCGTAAGATGAAATCTTGAG
ATTTCTAAGAGTCATGGAAACATCCTAGAATAAAGAGTTTTCAGCAA

hide sequence

RefSeq Acc Id:

XM_005401890 ⟹ XP_005401947

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955476	11,827,006 - 11,833,495 (-)	NCBI

Sequence:

show sequence

TGGTCGAGGGAGGAGTGGGCGTCGGCTCTCGACTTCGTCGGTTGTTTGGGCGCGTTCTTAGTGC
CTGGATGTGACTGTCAGCCAGGCCCTTCCGGTCAGCGGGCGGGGGTGTGCCGGGGAGCTCTCTG
CGCTCGCGCGGCAGTACCCGAGCAGGTCTGAACTGGCGTGATCCGGGCCAGAAAACCGCCTCTG
GAAAGCGGAGATGAGCGCTCAGGACGTTGCATAAAATGCAGGCCAGACTTTACGGCACCAGGTC
CCGGAGCCATGGAGCCCCGGGCGGTTGCGGATGTAGTGGAGACTGGAAAGGAAGATGTGATTGC
AGAAGCTCTGAGAACATACAACCAGGAGCATTCGGAGAGCTTCACCTTTGACGATGCCCAGCAG
GAAGATAGAAAGAGACTCGCAAAGCTGCTGGTGTCTGTCCTGGAGCAGGGCTTGCCACTTTCAC
ACCGTGTCATCTGGCTGCAGACTGTCCGAATCCTGTCCCGGGACCGGAGCTGCCTGGCTCCATT
CACCAGCCGCCAGAGTCTGCACGCATTAGCCTCTTATGCTGACATATCTGCCTCTGAGGGGTCC
CTCCCAGAGGCCTTTGACATGGATGTCATGCTTGAGTCCCTTAAGTGCTTGTGCAACCTTGTCC
TCAGCAGCCCTGTGGCACAAGCACTTGCTGCGGAGGCCCGCCTGGTGGTGAAGCTTATAGAACG
TGTGGGGTTGTATGGCAAGAGAAGCTTCCCCCATGAGGTGCAGTTCTTTGACCTGCGGCTCCTC
TTTCTGCTAACTGCACTACGCACTGATGTGCGCCAGCAGCTGTTTCAGGAGCTGCATGGTGTAC
ATGTGTTGACTGATGCACTGGAACTGACGCTAGGAGTGACTTCTAAAGAGAGTCCCCCTGAAGT
CCTTCCTCCCCAAGAGACTGAGCGAATCATGGAGATCCTCAAAGTGCTCTTCAACATCACCTTC
GACTCTATCAAGAGGGAGGTAGAGGAGGAAGATGCTGCCCTTTACCAGTACCTGGGGACCCTTT
TGCGGCACTGTGTGATGATTGCTGCTGCTGGAGACCGCACAGAGGAGTTCCATGGCCACACCGT
GAATCTCCTAGGGAATTTGCCCCTCAAGTGCTTGGATGTCCTTCTCACCCTGGACCTACACGAA
GGCTCTTTGGAGTTCATGGGAGTGAACATGGATGTGATCAGTGTCCTCCTCGCCTTCCTAGAGA
AGCGCTTAAATCAGACCCACAGGCTGAAGGAGAGTGTGGCTCCTGTACTAAGTGTGCTGACTGA
GTGTGCCCGCATGCACCGTCCAGCCAGGAAGTTCCTGAAGGCCCAGGTGTTGCCACCCCTGCGG
GATGTAAGGACTCGGCCAGAGGTGGGAGAGCTACTTCGGAACAAGCTGGTGCGCCTTATGACAC
ACCTAGACACAGATGTGAAGAGGGTAGCTGCAGAGTTCCTCTTTGTCCTGTGCTCTGAGAGTGT
GCCCCGGTTCATCAAGTACACAGGCTACGGGAATGCTGCTGGCCTTCTGGCTGCCAGGGGCCTT
ATGGCAGGGGGCCGGACTGAGGGGCAGTACTCGGATGATGAGGACACAGACACAGATGAGTACA
AGGAAGCCAAGGCCAGCATCAACCCAGTGACTGGCAGGGTAGAAGAGAAGCCACCCAACCCTAT
GGAGGGTATGACAGAGGAACAAAAGGAGCATGAGGCCATGAAGCTGGTGAACATGTTTGACAGG
CTGTCAAGGCACCGAGTCATCCAGCCCATGGGCATGAGTCCCCAGGGTCACCTCACATCCCTGC
AAGATGCCGTGTGTGAGACCATGGAGGGGCAGCTCTCCTCAGACCCGGATTCTGACCCTGACTG
AGGATGGTAGTTCCTCTGCTCCACCTTCAGAATTGGTGCTGCTTCCAGAGACATCCTTGGGGCG
GCAGCCTTGGGAAGCCCAGCCCTTCTCTAGCTGGAGTCCCTTTCTGTACCCCAAGTTCTGTTTA
TGACTTGCCTCTACTCCTATTTCTTATCTTGTGGATTGCAATAGTCTTGTCCTGCTGTAGCTCT
GGGAACTTGGCCCTGGTTTCTACAGGTGAGGCTGGCCTAAGTAGGGAGCATTTATGATATGAGC
CCATCTGGGGCTGGCACACTGCATTTCACAGAAGGGATGTGCTAGAATTTTACCAGTCCATACA
CTGGATGTCAAGGTAGGCTTCTGTTGTATTTCCACCAAACAGGGCTACTCATGCTTCCACATTT
CCCTTGGTCCTGCCTTAACCACCCATTACAGTATCCACATACCCATGTTCTCACTGGCTATGAC
ATTGTCAATTGAAGAATACCAATCCTACTCACTGGTTCAGGCTGAATACTTGTATGAAGGAAAA
TGACCCTACTGAGACCGTAAGATGAAATCTTGAGATTTCTAAGAGTCATGGAAACATCCTAGAA
TAAAGAGTTTTCAGCAA

hide sequence

RefSeq Acc Id:

XM_013502915 ⟹ XP_013358369

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955476	11,827,004 - 11,833,162 (-)	NCBI

Sequence:

show sequence

CCGCCGCCCCCACTGCCCCTTTCCGGTGTGCCCTGCAGTCTTCATCACACCCTCTGAAGCGGTC
ACTTTCGCCGGCTGTCTCCAGAGGGCGCCGGGACTAGGCCGGCAGGGGGGGTCTCCTCGCACCT
TGCAGCCTCCCAGTCATTTCTTGGAGGACTTTGACCCCCACAGTTAGTCTTGTTTCTTTCGTGA
ACGCCACAAAGGCGGGGGAGGGGTGTCAGGTCGGCCCCCCTTCCCGACGTCTCCCATGCAGCGA
GCTTTCCGCAGAGTTGCCCCACTAGCTGTACTGGGTATCGAGCAAGAATCTCTCCTCCTAGGAC
AAAGGAGGGGCCGCTGCTCGGTTCCTGGGCTACTTGGACCGTGAGGTTCGCCCATCACCGACTC
AGCCTGCTGCCTTGCCTAGCCTAGCCAGTGCTTCTCGGTCGCTCCACCTTAAGCAGCAGCGCAG
CCGAGTCCCCGCCCAGTGCGGCCCGGTCCGGTCCCGGCATCCACCGCGCGTCGACGCGGGGCTG
CCGAACTAGGGCGGGGCCGGCAGACTAACCAGCTAGATTTTTGCAGGCCAGACTTTACGGCACC
AGGTCCCGGAGCCATGGAGCCCCGGGCGGTTGCGGATGTAGTGGAGACTGGAAAGGAAGATGTG
ATTGCAGAAGCTCTGAGAACATACAACCAGGAGCATTCGGAGAGCTTCACCTTTGACGATGCCC
AGCAGGAAGATAGAAAGAGACTCGCAAAGCTGCTGGTGTCTGTCCTGGAGCAGGGCTTGCCACT
TTCACACCGTGTCATCTGGCTGCAGACTGTCCGAATCCTGTCCCGGGACCGGAGCTGCCTGGCT
CCATTCACCAGCCGCCAGAGTCTGCACGCATTAGCCTCTTATGCTGACATATCTGCCTCTGAGG
GGTCCCTCCCAGAGGCCTTTGACATGGATGTCATGCTTGAGTCCCTTAAGTGCTTGTGCAACCT
TGTCCTCAGCAGCCCTGTGGCACAAGCACTTGCTGCGGAGGCCCGCCTGGTGGTGAAGCTTATA
GAACGTGTGGGGTTGTATGGCAAGAGAAGCTTCCCCCATGAGGTGCAGTTCTTTGACCTGCGGC
TCCTCTTTCTGCTAACTGCACTACGCACTGATGTGCGCCAGCAGCTGTTTCAGGAGCTGCATGG
TGTACATGTGTTGACTGATGCACTGGAACTGACGCTAGGAGTGACTTCTAAAGAGAGTCCCCCT
GAAGTCCTTCCTCCCCAAGAGACTGAGCGAATCATGGAGATCCTCAAAGTGCTCTTCAACATCA
CCTTCGACTCTATCAAGAGGGAGGTAGAGGAGGAAGATGCTGCCCTTTACCAGTACCTGGGGAC
CCTTTTGCGGCACTGTGTGATGATTGCTGCTGCTGGAGACCGCACAGAGGAGTTCCATGGCCAC
ACCGTGAATCTCCTAGGGAATTTGCCCCTCAAGTGCTTGGATGTCCTTCTCACCCTGGACCTAC
ACGAAGGCTCTTTGGAGTTCATGGGAGTGAACATGGATGTGATCAGTGTCCTCCTCGCCTTCCT
AGAGAAGCGCTTAAATCAGACCCACAGGCTGAAGGAGAGTGTGGCTCCTGTACTAAGTGTGCTG
ACTGAGTGTGCCCGCATGCACCGTCCAGCCAGGAAGTTCCTGAAGGCCCAGGTGTTGCCACCCC
TGCGGGATGTAAGGACTCGGCCAGAGGTGGGAGAGCTACTTCGGAACAAGCTGGTGCGCCTTAT
GACACACCTAGACACAGATGTGAAGAGGGTAGCTGCAGAGTTCCTCTTTGTCCTGTGCTCTGAG
AGTGTGCCCCGGTTCATCAAGTACACAGGCTACGGGAATGCTGCTGGCCTTCTGGCTGCCAGGG
GCCTTATGGCAGGGGGCCGGACTGAGGGGCAGTACTCGGATGATGAGGACACAGACACAGATGA
GTACAAGGAAGCCAAGGCCAGCATCAACCCAGTGACTGGCAGGGTAGAAGAGAAGCCACCCAAC
CCTATGGAGGGTATGACAGAGGAACAAAAGGAGCATGAGGCCATGAAGCTGGTGAACATGTTTG
ACAGGCTGTCAAGGCACCGAGTCATCCAGCCCATGGGCATGAGTCCCCAGGGTCACCTCACATC
CCTGCAAGATGCCGTGTGTGAGACCATGGAGGGGCAGCTCTCCTCAGACCCGGATTCTGACCCT
GACTGAGGATGGTAGTTCCTCTGCTCCACCTTCAGAATTGGTGCTGCTTCCAGAGACATCCTTG
GGGCGGCAGCCTTGGGAAGCCCAGCCCTTCTCTAGCTGGAGTCCCTTTCTGTACCCCAAGTTCT
GTTTATGACTTGCCTCTACTCCTATTTCTTATCTTGTGGATTGCAATAGTCTTGTCCTGCTGTA
GCTCTGGGAACTTGGCCCTGGTTTCTACAGGTGAGGCTGGCCTAAGTAGGGAGCATTTATGATA
TGAGCCCATCTGGGGCTGGCACACTGCATTTCACAGAAGGGATGTGCTAGAATTTTACCAGTCC
ATACACTGGATGTCAAGGTAGGCTTCTGTTGTATTTCCACCAAACAGGGCTACTCATGCTTCCA
CATTTCCCTTGGTCCTGCCTTAACCACCCATTACAGTATCCACATACCCATGTTCTCACTGGCT
ATGACATTGTCAATTGAAGAATACCAATCCTACTCACTGGTTCAGGCTGAATACTTGTATGAAG
GAAAATGACCCTACTGAGACCGTAAGATGAAATCTTGAGATTTCTAAGAGTCATGGAAACATCC
TAGAATAAAGAGTTTTCAGCAAGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005401946	(Get FASTA)	NCBI Sequence Viewer
	XP_005401947	(Get FASTA)	NCBI Sequence Viewer
	XP_013358369	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000007279
	ENSCLAP00000007279.1

RefSeq Acc Id:

XP_005401947 ⟸ XM_005401890

- UniProtKB:

A0A8C2V2S6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEPRAVADVVETGKEDVIAEALRTYNQEHSESFTFDDAQQEDRKRLAKLLVSVLEQGLPLSHRV
IWLQTVRILSRDRSCLAPFTSRQSLHALASYADISASEGSLPEAFDMDVMLESLKCLCNLVLSS
PVAQALAAEARLVVKLIERVGLYGKRSFPHEVQFFDLRLLFLLTALRTDVRQQLFQELHGVHVL
TDALELTLGVTSKESPPEVLPPQETERIMEILKVLFNITFDSIKREVEEEDAALYQYLGTLLRH
CVMIAAAGDRTEEFHGHTVNLLGNLPLKCLDVLLTLDLHEGSLEFMGVNMDVISVLLAFLEKRL
NQTHRLKESVAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGELLRNKLVRLMTHLD
TDVKRVAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRTEGQYSDDEDTDTDEYKEA
KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVNMFDRLSRHRVIQPMGMSPQGHLTSLQDA
VCETMEGQLSSDPDSDPD

hide sequence

RefSeq Acc Id:

XP_005401946 ⟸ XM_005401889

- UniProtKB:

A0A8C2V2S6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEPRAVADVVETGKEDVIAEALRTYNQEHSESFTFDDAQQEDRKRLAKLLVSVLEQGLPLSHRV
IWLQTVRILSRDRSCLAPFTSRQSLHALASYADISASEGSLPEAFDMDVMLESLKCLCNLVLSS
PVAQALAAEARLVVKLIERVGLYGKRSFPHEVQFFDLRLLFLLTALRTDVRQQLFQELHGVHVL
TDALELTLGVTSKESPPEVLPPQETERIMEILKVLFNITFDSIKREVEEEDAALYQYLGTLLRH
CVMIAAAGDRTEEFHGHTVNLLGNLPLKCLDVLLTLDLHEGSLEFMGVNMDVISVLLAFLEKRL
NQTHRLKESVAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGELLRNKLVRLMTHLD
TDVKRVAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRTEGQYSDDEDTDTDEYKEA
KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVNMFDRLSRHRVIQPMGMSPQGHLTSLQDA
VCETMEGQLSSDPDSDPD

hide sequence

RefSeq Acc Id:

XP_013358369 ⟸ XM_013502915

- UniProtKB:

A0A8C2V2S6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEPRAVADVVETGKEDVIAEALRTYNQEHSESFTFDDAQQEDRKRLAKLLVSVLEQGLPLSHRV
IWLQTVRILSRDRSCLAPFTSRQSLHALASYADISASEGSLPEAFDMDVMLESLKCLCNLVLSS
PVAQALAAEARLVVKLIERVGLYGKRSFPHEVQFFDLRLLFLLTALRTDVRQQLFQELHGVHVL
TDALELTLGVTSKESPPEVLPPQETERIMEILKVLFNITFDSIKREVEEEDAALYQYLGTLLRH
CVMIAAAGDRTEEFHGHTVNLLGNLPLKCLDVLLTLDLHEGSLEFMGVNMDVISVLLAFLEKRL
NQTHRLKESVAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGELLRNKLVRLMTHLD
TDVKRVAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRTEGQYSDDEDTDTDEYKEA
KASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVNMFDRLSRHRVIQPMGMSPQGHLTSLQDA
VCETMEGQLSSDPDSDPD

hide sequence

RefSeq Acc Id:

ENSCLAP00000007279 ⟸ ENSCLAT00000007393

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005117	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000007393	ENTREZGENE
	ENSCLAT00000007393.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	Gua_nucleotide_exch_fac_Ric8	UniProtKB/TrEMBL
	Synembryn	UniProtKB/TrEMBL
NCBI Gene	Ric8a	ENTREZGENE
PANTHER	PTHR12425	UniProtKB/TrEMBL
	SYNEMBRYN-A	UniProtKB/TrEMBL
Pfam	Ric8	UniProtKB/TrEMBL
PRINTS	SYNEMBRYN	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
UniProt	A0A8C2V2S6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD