Hpd (4-hydroxyphenylpyruvate dioxygenase) - Rat Genome Database
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Gene: Hpd (4-hydroxyphenylpyruvate dioxygenase) Chinchilla lanigera
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Symbol: Hpd
Name: 4-hydroxyphenylpyruvate dioxygenase
RGD ID: 9060773
Description: ENCODES a protein that exhibits 4-hydroxyphenylpyruvate dioxygenase activity (ortholog); INVOLVED IN tyrosine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Developmental Disabilities (ortholog); hawkinsinuria (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554826,586,975 - 6,595,034 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554826,586,975 - 6,595,034 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Hpd
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554826,586,975 - 6,595,034 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554826,586,975 - 6,595,034 (+)NCBIChiLan1.0ChiLan1.0
HPD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl12121,839,527 - 121,863,596 (-)EnsemblGRCh38hg38GRCh38
GRCh3812121,839,527 - 121,888,611 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3712122,277,433 - 122,326,517 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612120,761,816 - 120,781,152 (-)NCBINCBI36hg18NCBI36
Build 3412120,740,154 - 120,759,489NCBI
Celera12121,913,690 - 121,962,455 (-)NCBI
Cytogenetic Map12q24.31NCBI
HuRef12119,289,545 - 119,337,791 (-)NCBIHuRef
CHM1_112122,245,145 - 122,294,160 (-)NCBICHM1_1
Hpd
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395123,309,870 - 123,320,786 (-)NCBIGRCm39mm39
GRCm385123,171,807 - 123,182,723 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5123,171,807 - 123,182,727 (-)EnsemblGRCm38mm10GRCm38
MGSCv375123,621,816 - 123,632,695 (-)NCBIGRCm37mm9NCBIm37
MGSCv365123,432,425 - 123,443,305 (-)NCBImm8
Celera5120,267,078 - 120,277,955 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map562.82NCBI
Hpd
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01238,828,606 - 38,839,956 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1238,828,444 - 38,839,969 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01240,729,052 - 40,740,668 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41234,548,320 - 34,558,371 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11234,411,707 - 34,421,759 (+)NCBI
Celera1235,063,212 - 35,073,637 (+)NCBICelera
Cytogenetic Map12q16NCBI
HPD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.112122,813,141 - 122,859,815 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12122,813,141 - 122,831,701 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v012119,442,893 - 119,462,171 (-)NCBIMhudiblu_PPA_v0panPan3
HPD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl267,430,933 - 7,440,611 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1267,430,891 - 7,440,643 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
HPD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1430,845,613 - 30,857,667 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11430,845,608 - 30,857,658 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21432,650,996 - 32,662,746 (+)NCBISscrofa10.2Sscrofa10.2susScr3
HPD
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111117,203,844 - 117,246,249 (-)NCBI
ChlSab1.1 Ensembl11117,203,307 - 117,224,038 (-)Ensembl
Hpd
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474722,209,191 - 22,217,665 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000014599   ⟹   ENSCLAP00000014441
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554826,586,975 - 6,595,034 (+)Ensembl
RefSeq Acc Id: XM_005403106   ⟹   XP_005403163
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554826,586,975 - 6,595,034 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005403163 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005403163   ⟸   XM_005403106
- Sequence:
RefSeq Acc Id: ENSCLAP00000014441   ⟸   ENSCLAT00000014599


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000009960 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000014441 ENTREZGENE
Ensembl Transcript ENSCLAT00000014599 ENTREZGENE
NCBI Gene Hpd ENTREZGENE