Tmem69 (transmembrane protein 69)

Advanced Search (OLGA)

Gene: Tmem69 (transmembrane protein 69) Chinchilla lanigera

Analyze

Symbol:

Tmem69

Name:

transmembrane protein 69

RGD ID:

9060420

Description:

ASSOCIATED WITH amenorrhea (ortholog); Charcot-Marie-Tooth disease dominant intermediate C (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN mitochondrion (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	12,594,788 - 12,597,711 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	12,594,544 - 12,602,137 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amenorrhea (ISO)

Charcot-Marie-Tooth disease dominant intermediate C (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

mitochondrion (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Tmem69
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	12,594,788 - 12,597,711 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	12,594,544 - 12,602,137 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMEM69
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	45,688,181 - 45,694,436 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	45,688,181 - 45,694,436 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	46,153,853 - 46,160,108 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	45,926,434 - 45,932,695 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	44,437,828 - 44,444,089 (+)	NCBI		Celera
Cytogenetic Map	1	p34.1	NCBI
HuRef	1	44,264,905 - 44,271,130 (+)	NCBI		HuRef
CHM1_1	1	46,271,022 - 46,277,283 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	45,560,527 - 45,566,780 (+)	NCBI		T2T-CHM13v2.0

Tmem69
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	116,408,725 - 116,414,262 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	116,409,102 - 116,413,132 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	116,551,528 - 116,557,116 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	116,551,633 - 116,555,936 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	116,224,133 - 116,228,548 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	116,049,460 - 116,053,859 (-)	NCBI		MGSCv36	mm8
Celera	4	115,285,168 - 115,289,623 (-)	NCBI		Celera
Cytogenetic Map	4	D1	NCBI
cM Map	4	53.22	NCBI

Tmem69
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	135,241,557 - 135,247,323 (-)	NCBI		GRCr8
mRatBN7.2	5	130,004,888 - 130,008,466 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	130,004,901 - 130,010,655 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	132,629,107 - 132,632,686 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	134,383,704 - 134,387,283 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	134,406,130 - 134,409,709 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	135,394,013 - 135,397,591 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	135,394,016 - 135,397,591 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	139,190,198 - 139,193,776 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	136,831,040 - 136,834,619 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	128,532,638 - 128,536,216 (-)	NCBI		Celera
Cytogenetic Map	5	q35	NCBI

TMEM69
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	181,117,559 - 181,123,861 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	180,259,110 - 180,265,415 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	44,987,380 - 44,993,900 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	46,345,285 - 46,351,530 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	46,345,285 - 46,351,530 (+)	Ensembl	panpan1.1		panPan2

TMEM69
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	14,666,926 - 14,671,839 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	14,667,231 - 14,671,622 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	14,787,965 - 14,793,842 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	14,821,462 - 14,827,164 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	14,821,473 - 14,828,197 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	14,618,690 - 14,624,436 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	14,688,383 - 14,694,273 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	14,758,524 - 14,764,204 (-)	NCBI		UU_Cfam_GSD_1.0

Tmem69
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	60,969,227 - 60,974,688 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	26,795,499 - 26,801,242 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	26,793,410 - 26,799,451 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM69
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	165,704,617 - 165,709,964 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	165,704,599 - 165,708,983 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TMEM69
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	87,105,289 - 87,111,450 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	87,105,508 - 87,108,728 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	29,858,305 - 29,864,440 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem69
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624906	1,581,018 - 1,584,166 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624906	1,577,993 - 1,583,380 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005398694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005398695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005398696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013521587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01050210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01165310	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000006077 ⟹ ENSCLAP00000005974

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955464	12,594,788 - 12,597,711 (-)	Ensembl

RefSeq Acc Id:

XM_005398694 ⟹ XP_005398751

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955464	12,594,544 - 12,601,179 (-)	NCBI

Sequence:

show sequence

TGAAAGCCTAGCGGGGCTCCCAGCGGTTACTACTACGAAGATTGTGCTGTGCCGTAATCATGCC
CTGGAAGCTAAACCACGTGAGGGATGGCAGCCAGGAAGCGAGGCTACGGAGAGTTCAGGAGCGC
AGGAACTGGCACGGGCTCCCAGAGAAATAAGCTCTTAAATTTGTCTTCAGCTTTCTCTTTCGAG
ACGGAAGGACACTCGAATTGCTGGTGTCATTTCCTTTCATAGGCTGATACTGACTCTGAGAAGG
AAAGGGTTATTCAAGGTCACACAGCCTAGAAATAAATTCAAACCTAGGGTGATAAGAGGAATGA
GAAGTTTTTTCTGATACCCCGCCCCGTTCAAGGTTCTAAACGCGGCAGCTCGAGTCAGAGAATG
AGACTGCTGCCCCTTGGCTCTTTATTCCTTAACGGAAATTTCTAGGGCCCTACCAAAAAGAATG
GAAATAAAAAGCATCCTGCCCCAGTAGTAGTAAAGGACTCTCAGGCGCAGTAACACTAGTCCCG
TCGATCCAAAACCCGGCTGTTTTGAAAAGTTAGGGAAAAAAAAGACTGGGAGATGGCAATTTGG
CCAAGTCACACTTGACCTAAATTCCAAATCTCCTACCTTCATTCTGAGATTGTTTCAGAACTCT
GCAGGCAGATTCGGCTGGGTGGGAATCTTGAAAAAGAGATTGATCAGGTATCTTCTTCAACAGC
TGACTTCAACCAAAATAAAGATTTAAAAAATGTCCCCAAGACGGAAGGCCGGGCGTGGGAACCA
TTTAGCGTTAGTCAAATACCTACCCGGACTCAGTTTTTAGCTTCGCAGGAAGTAGGGTGCTAAC
TCGACCGGCAGGAAATGCTTTTCCGCGAATCGCAGGTTCTTCCTGCAGTTCAGCTGACCACGTG
ACCACGCGATCCGGGCAAGAATCGGGGCCGCCACGGCAACATGCTTCTGATTCAGCCTGTCTAC
TAAGCTATAGAATATTTTAATGAGAACTGGTTGGCATATTCCTGAAGAAGACTTTTAGTAGGGG
CCAGTATGCTGCACTTCATTCAGAGGTTTTCTCAAGCATCATCAAAGATGCTGAAGTATCCTTT
CACAATGATACTAGAAGCCAGCAGGAAAACAGATACACTTTCTCTCAAGACACCTCTCCAGCGG
AAGCTTTCCCCTTTGTGTCCAAGGCCTCAGTCTTTTCCATCAATTTCAGTGTGTATGAGTAAGG
CACAATGCTATCATACATCCTCATGCAGCTTTAAGAAGAAGCAGGAGCAAGAAGTACTTCCAGC
CAGGCCACCAATTACCATCACTTATCTGCCTGAAAGCCCAAAGCCAGCATTGTATATAACTCTG
GCAGGACTAATCCCTTTCATTGCTCCACCACTAATCATGGTCATGACAAAGTCTTATATCCCTG
CATTAGCTTTTACTCAGATGGCTTATGGAGCCAGTTTCCTGTCTTTTTTAGGAGGGGTCAGATG
GGGTTTTACTCTGACAGAAGGTAGTCCAGCCAAACCAGACTACCTTAATTTAGCTAACAGTGTA
GCTCCTATTGTGTTTTCATGGTTTGCCTTCCTCATTTCTGAAAGACTCAGTGAAGCCATAGTCA
CAGTAATAATAGGTTTGGGGGTAACATTACATGTTGAACTTTTTCTCTTGCCGCATTATCCCAA
TTGGTTCAAAGCCCTGAGGATAGTAGTCACTTTAGTGGCTGTTTTGTCATTTGCAGTCACTTTA
ATACTTCAAGATATTTATCCAGAGAAAGGATCTAAGAGACCTGGTCAAGTAGAATAAATATAAA
ATTACTTTGTTGATAACATTACCATGTTGGCTACAAGTTTATGTGTATGTAAGAAGGGCAAGTG
GAGTGCTGGGGATCAAACACAAGGTTTGAGCATGGTGGCAAGCACTCCACTATTTTGGGATGTA
CCCTTACCTACCTGCCTACAAGCTCTCGGAAGTTACATTTTGGTATCACCTTTCTTCTATTGGT
ATTTGCCCTTCCCCCACAGTGGTAATTTTTTTTTTTTTTTTTAAA

hide sequence

RefSeq Acc Id:

XM_005398695 ⟹ XP_005398752

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955464	12,594,544 - 12,602,137 (-)	NCBI

Sequence:

show sequence

CGAGACTCCAACTCACCAGGCAGCGGCAGGGTTACAACCAAGGACGAGACGCGGCGTCCGGGGA
CGCGTTCCCAGCTTCTCGGCCCGGCAGAGCAACATGCTTCTGATTCAGCCTGTCTACTAAGCTA
TAGAATATTTTAATGAGAACTGGTTGGCATATTCCTGAAGAAGACTTTTAGTAGGGGCCAGTAT
GCTGCACTTCATTCAGAGGTTTTCTCAAGCATCATCAAAGATGCTGAAGTATCCTTTCACAATG
ATACTAGAAGCCAGCAGGAAAACAGATACACTTTCTCTCAAGACACCTCTCCAGCGGAAGCTTT
CCCCTTTGTGTCCAAGGCCTCAGTCTTTTCCATCAATTTCAGTGTGTATGAGTAAGGCACAATG
CTATCATACATCCTCATGCAGCTTTAAGAAGAAGCAGGAGCAAGAAGTACTTCCAGCCAGGCCA
CCAATTACCATCACTTATCTGCCTGAAAGCCCAAAGCCAGCATTGTATATAACTCTGGCAGGAC
TAATCCCTTTCATTGCTCCACCACTAATCATGGTCATGACAAAGTCTTATATCCCTGCATTAGC
TTTTACTCAGATGGCTTATGGAGCCAGTTTCCTGTCTTTTTTAGGAGGGGTCAGATGGGGTTTT
ACTCTGACAGAAGGTAGTCCAGCCAAACCAGACTACCTTAATTTAGCTAACAGTGTAGCTCCTA
TTGTGTTTTCATGGTTTGCCTTCCTCATTTCTGAAAGACTCAGTGAAGCCATAGTCACAGTAAT
AATAGGTTTGGGGGTAACATTACATGTTGAACTTTTTCTCTTGCCGCATTATCCCAATTGGTTC
AAAGCCCTGAGGATAGTAGTCACTTTAGTGGCTGTTTTGTCATTTGCAGTCACTTTAATACTTC
AAGATATTTATCCAGAGAAAGGATCTAAGAGACCTGGTCAAGTAGAATAAATATAAAATTACTT
TGTTGATAACATTACCATGTTGGCTACAAGTTTATGTGTATGTAAGAAGGGCAAGTGGAGTGCT
GGGGATCAAACACAAGGTTTGAGCATGGTGGCAAGCACTCCACTATTTTGGGATGTACCCTTAC
CTACCTGCCTACAAGCTCTCGGAAGTTACATTTTGGTATCACCTTTCTTCTATTGGTATTTGCC
CTTCCCCCACAGTGGTAATTTTTTTTTTTTTTTTTAAA

hide sequence

RefSeq Acc Id:

XM_005398696 ⟹ XP_005398753

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955464	12,594,544 - 12,601,179 (-)	NCBI

Sequence:

show sequence

TGAAAGCCTAGCGGGGCTCCCAGCGGTTACTACTACGAAGATTGTGCTGTGCCGTAATCATGCC
CTGGAAGCTAAACCACGTGAGGGATGGCAGCCAGGAAGCGAGGCTACGGAGAGTTCAGGAGCGC
AGGAACTGGCACGGGCTCCCAGAGAAATAAGCTCTTAAATTTGTCTTCAGCTTTCTCTTTCGAG
ACGGAAGGACACTCGAATTGCTGGTGTCATTTCCTTTCATAGGCTGATACTGACTCTGAGAAGG
AAAGGGTTATTCAAGGTCACACAGCCTAGAAATAAATTCAAACCTAGGGTGATAAGAGGAATGA
GAAGTTTTTTCTGATACCCCGCCCCGTTCAAGGTTCTAAACGCGGCAGCTCGAGTCAGAGAATG
AGACTGCTGCCCCTTGGCTCTTTATTCCTTAACGGAAATTTCTAGGGCCCTACCAAAAAGAATG
GAAATAAAAAGCATCCTGCCCCAGTAGTAGTAAAGGACTCTCAGGCGCAGTAACACTAGTCCCG
TCGATCCAAAACCCGGCTGTTTTGAAAAGTTAGGGAAAAAAAAGACTGGGAGATGGCAATTTGG
CCAAGTCACACTTGACCTAAATTCCAAATCTCCTACCTTCATTCTGAGATTGTTTCAGAACTCT
GCAGGCAGATTCGGCTGGGTGGGAATCTTGAAAAAGAGATTGATCAGGTATCTTCTTCAACAGC
TGACTTCAACCAAAATAAAGATTTAAAAAATGTCCCCAAGACGGAAGGCCGGGCGTGGGAACCA
TTTAGCGTTAGTCAAATACCTACCCGGACTCAGTTTTTAGCTTCGCAGGAAGTAGGGTGCTAAC
TCGACCGGCAGGAAATGCTTTTCCGCGAATCGCAGGTTCTTCCTGCAGTTCAGCTGACCACGTG
ACCACGCGATCCGGGCAAGAATCGGGGCCGCCACGGTTCTGAGGGTTGCACCTGTGACTTTCGA
ATTGAGCAACATGCTTCTGATTCAGCCTGTCTACTAAGCTATAGAATATTTTAATGAGAACTGG
TTGGCATATTCCTGAAGAAGACTTTTAGTAGGGGCCAGTATGCTGCACTTCATTCAGAGGTTTT
CTCAAGCATCATCAAAGATGCTGAAGTATCCTTTCACAATGATACTAGAAGCCAGCAGGAAAAC
AGATACACTTTCTCTCAAGACACCTCTCCAGCGGAAGCTTTCCCCTTTGTGTCCAAGGCCTCAG
TCTTTTCCATCAATTTCAGTGTGTATGAGTAAGGCACAATGCTATCATACATCCTCATGCAGCT
TTAAGAAGAAGCAGGAGCAAGAAGTACTTCCAGCCAGGCCACCAATTACCATCACTTATCTGCC
TGAAAGCCCAAAGCCAGCATTGTATATAACTCTGGCAGGACTAATCCCTTTCATTGCTCCACCA
CTAATCATGGTCATGACAAAGTCTTATATCCCTGCATTAGCTTTTACTCAGATGGCTTATGGAG
CCAGTTTCCTGTCTTTTTTAGGAGGGGTCAGATGGGGTTTTACTCTGACAGAAGGTAGTCCAGC
CAAACCAGACTACCTTAATTTAGCTAACAGTGTAGCTCCTATTGTGTTTTCATGGTTTGCCTTC
CTCATTTCTGAAAGACTCAGTGAAGCCATAGTCACAGTAATAATAGGTTTGGGGGTAACATTAC
ATGTTGAACTTTTTCTCTTGCCGCATTATCCCAATTGGTTCAAAGCCCTGAGGATAGTAGTCAC
TTTAGTGGCTGTTTTGTCATTTGCAGTCACTTTAATACTTCAAGATATTTATCCAGAGAAAGGA
TCTAAGAGACCTGGTCAAGTAGAATAAATATAAAATTACTTTGTTGATAACATTACCATGTTGG
CTACAAGTTTATGTGTATGTAAGAAGGGCAAGTGGAGTGCTGGGGATCAAACACAAGGTTTGAG
CATGGTGGCAAGCACTCCACTATTTTGGGATGTACCCTTACCTACCTGCCTACAAGCTCTCGGA
AGTTACATTTTGGTATCACCTTTCTTCTATTGGTATTTGCCCTTCCCCCACAGTGGTAATTTTT
TTTTTTTTTTTTAAA

hide sequence

RefSeq Acc Id:

XM_013521586 ⟹ XP_013377040

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955464	12,594,544 - 12,602,132 (-)	NCBI

Sequence:

show sequence

CTCCAACTCACCAGGCAGCGGCAGGGTTACAACCAAGGACGAGACGCGGCGTCCGGGGACGCGT
TCCCAGCTTCTCGGCCCGGCAGAGTTCTGAGGGTTGCACCTGTGACTTTCGAATTGAGCAACAT
GCTTCTGATTCAGCCTGTCTACTAAGCTATAGAATATTTTAATGAGAACTGGTTGGCATATTCC
TGAAGAAGACTTTTAGTAGGGGCCAGTATGCTGCACTTCATTCAGAGGTTTTCTCAAGCATCAT
CAAAGATGCTGAAGTATCCTTTCACAATGATACTAGAAGCCAGCAGGAAAACAGATACACTTTC
TCTCAAGACACCTCTCCAGCGGAAGCTTTCCCCTTTGTGTCCAAGGCCTCAGTCTTTTCCATCA
ATTTCAGTGTGTATGAGTAAGGCACAATGCTATCATACATCCTCATGCAGCTTTAAGAAGAAGC
AGGAGCAAGAAGTACTTCCAGCCAGGCCACCAATTACCATCACTTATCTGCCTGAAAGCCCAAA
GCCAGCATTGTATATAACTCTGGCAGGACTAATCCCTTTCATTGCTCCACCACTAATCATGGTC
ATGACAAAGTCTTATATCCCTGCATTAGCTTTTACTCAGATGGCTTATGGAGCCAGTTTCCTGT
CTTTTTTAGGAGGGGTCAGATGGGGTTTTACTCTGACAGAAGGTAGTCCAGCCAAACCAGACTA
CCTTAATTTAGCTAACAGTGTAGCTCCTATTGTGTTTTCATGGTTTGCCTTCCTCATTTCTGAA
AGACTCAGTGAAGCCATAGTCACAGTAATAATAGGTTTGGGGGTAACATTACATGTTGAACTTT
TTCTCTTGCCGCATTATCCCAATTGGTTCAAAGCCCTGAGGATAGTAGTCACTTTAGTGGCTGT
TTTGTCATTTGCAGTCACTTTAATACTTCAAGATATTTATCCAGAGAAAGGATCTAAGAGACCT
GGTCAAGTAGAATAAATATAAAATTACTTTGTTGATAACATTACCATGTTGGCTACAAGTTTAT
GTGTATGTAAGAAGGGCAAGTGGAGTGCTGGGGATCAAACACAAGGTTTGAGCATGGTGGCAAG
CACTCCACTATTTTGGGATGTACCCTTACCTACCTGCCTACAAGCTCTCGGAAGTTACATTTTG
GTATCACCTTTCTTCTATTGGTATTTGCCCTTCCCCCACAGTGGTAATTTTTTTTTTTTTTTTT
AAA

hide sequence

RefSeq Acc Id:

XM_013521587 ⟹ XP_013377041

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955464	12,594,544 - 12,601,179 (-)	NCBI

Sequence:

show sequence

TGAAAGCCTAGCGGGGCTCCCAGCGGTTACTACTACGAAGATTGTGCTGTGCCGTAATCATGCC
CTGGAAGCTAAACCACGTGAGGGATGGCAGCCAGGAAGCGAGGCTACGGAGAGTTCAGGAGCGC
AGGAACTGGCACGGGCTCCCAGAGAAATAAGCTCTTAAATTTGTCTTCAGCTTTCTCTTTCGAG
ACGGAAGGACACTCGAATTGCTGGTGTCATTTCCTTTCATAGGCTGATACTGACTCTGAGAAGG
AAAGGGTTATTCAAGGTCACACAGCCTAGAAATAAATTCAAACCTAGGGTGATAAGAGGAATGA
GAAGTTTTTTCTGATACCCCGCCCCGTTCAAGGTTCTAAACGCGGCAGCTCGAGTCAGAGAATG
AGACTGCTGCCCCTTGGCTCTTTATTCCTTAACGGAAATTTCTAGGGCCCTACCAAAAAGAATG
GAAATAAAAAGCATCCTGCCCCAGTAGTAGTAAAGGACTCTCAGGCGCAGTAACACTAGTCCCG
TCGATCCAAAACCCGGCTGTTTTGAAAAGTTAGGGAAAAAAAAGACTGGGAGATGGCAATTTGG
CCAAGTCACACTTGACCTAAATTCCAAATCTCCTACCTTCATTCTGAGATTGTTTCAGAACTCT
GCAGGCAGATTCGGCTGGGTGGGAATCTTGAAAAAGAGATTGATCAGGTATCTTCTTCAACAGC
TGACTTCAACCAAAATAAAGATTTAAAAAATGTCCCCAAGACGGAAGGCCGGGCGTGGGAACCA
TTTAGCGTTAGTCAAATACCTACCCGGACTCAGTTTTTAGCTTCGCAGGAAGTAGGGTGCTAAC
TCGACCGGCAGGAAATGCTTTTCCGCGAATCGCAGGTTCTTCCTGCAGTTCAGCTGACCACGTG
ACCACGCGATCCGGGCAAGAATCGGGGCCGCCACGGTTCTGAGGGTTGCACCTGTGACTTTCGA
ATTGAGGTACATCTTACGGCTTTTTTGCGGGGAGCAGTAGGGCAACATGCTTCTGATTCAGCCT
GTCTACTAAGCTATAGAATATTTTAATGAGAACTGGTTGGCATATTCCTGAAGAAGACTTTTAG
TAGGGGCCAGTATGCTGCACTTCATTCAGAGGTTTTCTCAAGCATCATCAAAGATGCTGAAGTA
TCCTTTCACAATGATACTAGAAGCCAGCAGGAAAACAGATACACTTTCTCTCAAGACACCTCTC
CAGCGGAAGCTTTCCCCTTTGTGTCCAAGGCCTCAGTCTTTTCCATCAATTTCAGTGTGTATGA
GTAAGGCACAATGCTATCATACATCCTCATGCAGCTTTAAGAAGAAGCAGGAGCAAGAAGTACT
TCCAGCCAGGCCACCAATTACCATCACTTATCTGCCTGAAAGCCCAAAGCCAGCATTGTATATA
ACTCTGGCAGGACTAATCCCTTTCATTGCTCCACCACTAATCATGGTCATGACAAAGTCTTATA
TCCCTGCATTAGCTTTTACTCAGATGGCTTATGGAGCCAGTTTCCTGTCTTTTTTAGGAGGGGT
CAGATGGGGTTTTACTCTGACAGAAGGTAGTCCAGCCAAACCAGACTACCTTAATTTAGCTAAC
AGTGTAGCTCCTATTGTGTTTTCATGGTTTGCCTTCCTCATTTCTGAAAGACTCAGTGAAGCCA
TAGTCACAGTAATAATAGGTTTGGGGGTAACATTACATGTTGAACTTTTTCTCTTGCCGCATTA
TCCCAATTGGTTCAAAGCCCTGAGGATAGTAGTCACTTTAGTGGCTGTTTTGTCATTTGCAGTC
ACTTTAATACTTCAAGATATTTATCCAGAGAAAGGATCTAAGAGACCTGGTCAAGTAGAATAAA
TATAAAATTACTTTGTTGATAACATTACCATGTTGGCTACAAGTTTATGTGTATGTAAGAAGGG
CAAGTGGAGTGCTGGGGATCAAACACAAGGTTTGAGCATGGTGGCAAGCACTCCACTATTTTGG
GATGTACCCTTACCTACCTGCCTACAAGCTCTCGGAAGTTACATTTTGGTATCACCTTTCTTCT
ATTGGTATTTGCCCTTCCCCCACAGTGGTAATTTTTTTTTTTTTTTTTAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005398751	(Get FASTA)	NCBI Sequence Viewer
	XP_005398752	(Get FASTA)	NCBI Sequence Viewer
	XP_005398753	(Get FASTA)	NCBI Sequence Viewer
	XP_013377040	(Get FASTA)	NCBI Sequence Viewer
	XP_013377041	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005974
	ENSCLAP00000005974.1

RefSeq Acc Id:

XP_005398752 ⟸ XM_005398695

- UniProtKB:

A0A8C2YKS9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLHFIQRFSQASSKMLKYPFTMILEASRKTDTLSLKTPLQRKLSPLCPRPQSFPSISVCMSKAQ
CYHTSSCSFKKKQEQEVLPARPPITITYLPESPKPALYITLAGLIPFIAPPLIMVMTKSYIPAL
AFTQMAYGASFLSFLGGVRWGFTLTEGSPAKPDYLNLANSVAPIVFSWFAFLISERLSEAIVTV
IIGLGVTLHVELFLLPHYPNWFKALRIVVTLVAVLSFAVTLILQDIYPEKGSKRPGQVE

hide sequence

RefSeq Acc Id:

XP_005398751 ⟸ XM_005398694

- UniProtKB:

A0A8C2YKS9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLHFIQRFSQASSKMLKYPFTMILEASRKTDTLSLKTPLQRKLSPLCPRPQSFPSISVCMSKAQ
CYHTSSCSFKKKQEQEVLPARPPITITYLPESPKPALYITLAGLIPFIAPPLIMVMTKSYIPAL
AFTQMAYGASFLSFLGGVRWGFTLTEGSPAKPDYLNLANSVAPIVFSWFAFLISERLSEAIVTV
IIGLGVTLHVELFLLPHYPNWFKALRIVVTLVAVLSFAVTLILQDIYPEKGSKRPGQVE

hide sequence

RefSeq Acc Id:

XP_005398753 ⟸ XM_005398696

- UniProtKB:

A0A8C2YKS9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLHFIQRFSQASSKMLKYPFTMILEASRKTDTLSLKTPLQRKLSPLCPRPQSFPSISVCMSKAQ
CYHTSSCSFKKKQEQEVLPARPPITITYLPESPKPALYITLAGLIPFIAPPLIMVMTKSYIPAL
AFTQMAYGASFLSFLGGVRWGFTLTEGSPAKPDYLNLANSVAPIVFSWFAFLISERLSEAIVTV
IIGLGVTLHVELFLLPHYPNWFKALRIVVTLVAVLSFAVTLILQDIYPEKGSKRPGQVE

hide sequence

RefSeq Acc Id:

XP_013377040 ⟸ XM_013521586

- UniProtKB:

A0A8C2YKS9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLHFIQRFSQASSKMLKYPFTMILEASRKTDTLSLKTPLQRKLSPLCPRPQSFPSISVCMSKAQ
CYHTSSCSFKKKQEQEVLPARPPITITYLPESPKPALYITLAGLIPFIAPPLIMVMTKSYIPAL
AFTQMAYGASFLSFLGGVRWGFTLTEGSPAKPDYLNLANSVAPIVFSWFAFLISERLSEAIVTV
IIGLGVTLHVELFLLPHYPNWFKALRIVVTLVAVLSFAVTLILQDIYPEKGSKRPGQVE

hide sequence

RefSeq Acc Id:

XP_013377041 ⟸ XM_013521587

- UniProtKB:

A0A8C2YKS9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLHFIQRFSQASSKMLKYPFTMILEASRKTDTLSLKTPLQRKLSPLCPRPQSFPSISVCMSKAQ
CYHTSSCSFKKKQEQEVLPARPPITITYLPESPKPALYITLAGLIPFIAPPLIMVMTKSYIPAL
AFTQMAYGASFLSFLGGVRWGFTLTEGSPAKPDYLNLANSVAPIVFSWFAFLISERLSEAIVTV
IIGLGVTLHVELFLLPHYPNWFKALRIVVTLVAVLSFAVTLILQDIYPEKGSKRPGQVE

hide sequence

Ensembl Acc Id:

ENSCLAP00000005974 ⟸ ENSCLAT00000006077

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000004231	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000006077	ENTREZGENE
	ENSCLAT00000006077.1	UniProtKB/TrEMBL
InterPro	DUF3429	UniProtKB/TrEMBL
NCBI Gene	Tmem69	ENTREZGENE
PANTHER	PTHR15887	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 69	UniProtKB/TrEMBL
Pfam	DUF3429	UniProtKB/TrEMBL
UniProt	A0A8C2YKS9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar