Adgrv1 (adhesion G protein-coupled receptor V1) - Rat Genome Database

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Gene: Adgrv1 (adhesion G protein-coupled receptor V1) Chinchilla lanigera
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Symbol: Adgrv1
Name: adhesion G protein-coupled receptor V1
RGD ID: 9057518
Description: ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); autosomal recessive nonsyndromic deafness (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); periciliary membrane compartment (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: G protein-coupled receptor 98; G-protein coupled receptor 98; Gpr98
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541820,603,323 - 21,039,891 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Adgrv1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541820,603,323 - 21,039,891 (-)NCBIChiLan1.0ChiLan1.0
ADGRV1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl590,529,344 - 91,164,437 (+)EnsemblGRCh38hg38GRCh38
GRCh38590,558,796 - 91,164,437 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37589,854,614 - 90,460,254 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36589,890,373 - 90,495,789 (+)NCBINCBI36hg18NCBI36
Build 34589,890,372 - 90,495,788NCBI
Celera585,756,769 - 86,361,875 (+)NCBI
Cytogenetic Map5q14.3NCBI
HuRef585,065,303 - 85,671,984 (+)NCBIHuRef
CHM1_1589,287,285 - 89,892,836 (+)NCBICHM1_1
Adgrv1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391381,243,187 - 81,781,504 (-)NCBIGRCm39mm39
GRCm39 Ensembl1381,243,187 - 81,781,273 (-)Ensembl
GRCm381381,095,068 - 81,633,391 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1381,095,068 - 81,633,154 (-)EnsemblGRCm38mm10GRCm38
MGSCv371381,234,067 - 81,772,143 (-)NCBIGRCm37mm9NCBIm37
MGSCv361381,558,504 - 82,110,481 (-)NCBImm8
Celera1383,360,220 - 83,894,065 (-)NCBICelera
Cytogenetic Map13C2- C3NCBI
cM Map1342.18NCBI
Adgrv1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2211,331,434 - 11,911,713 (-)NCBI
Rnor_6.0 Ensembl28,926,850 - 9,504,134 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.028,926,843 - 9,504,455 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.028,807,139 - 9,384,148 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.428,851,539 - 8,915,885 (-)NCBIRGSC3.4rn4RGSC3.4
Celera27,694,132 - 8,271,980 (-)NCBICelera
Cytogenetic Map2q11NCBI
ADGRV1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1524,341,808 - 24,945,477 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl524,341,808 - 24,945,477 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0524,208,844 - 24,811,284 (-)NCBIMhudiblu_PPA_v0panPan3
ADGRV1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1317,866,459 - 18,351,532 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl317,866,808 - 18,351,532 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha319,235,603 - 19,752,086 (-)NCBI
ROS_Cfam_1.0317,771,680 - 18,290,892 (-)NCBI
UMICH_Zoey_3.1317,744,458 - 18,264,530 (-)NCBI
UNSW_CanFamBas_1.0317,712,784 - 18,230,146 (-)NCBI
UU_Cfam_GSD_1.0318,000,209 - 18,518,789 (-)NCBI
Adgrv1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213173,415,524 - 173,972,750 (-)NCBI
SpeTri2.0NW_0049364698,653,031 - 9,209,840 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADGRV1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl297,734,809 - 98,275,085 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1297,703,648 - 98,277,847 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22100,813,144 - 100,957,443 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ADGRV1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1484,498,630 - 85,082,813 (+)NCBI
ChlSab1.1 Ensembl484,498,573 - 85,083,504 (+)Ensembl
Adgrv1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247439,849,070 - 10,292,392 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013512957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGCD01019240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01019251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AGCD01081641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBBH01228156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBCQ01099833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013512957   ⟹   XP_013368411
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541820,603,323 - 21,039,891 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013368411 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013368411   ⟸   XM_013512957
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Gpr98 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 Adgrv1  adhesion G protein-coupled receptor V1  Gpr98  G protein-coupled receptor 98  Symbol and/or name change 5135510 APPROVED