Mettl6 (methyltransferase 6, tRNA N3-cytidine)

Gene: Mettl6 (methyltransferase 6, tRNA N3-cytidine) Chinchilla lanigera

Analyze

Symbol:

Mettl6

Name:

methyltransferase 6, tRNA N3-cytidine (Ensembl:methyltransferase like 6)

RGD ID:

9053433

Description:

ENCODES a protein that exhibits enzyme binding (ortholog); tRNA (cytidine-3-)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); tRNA modification (ortholog); PARTICIPATES IN selenoamino acid metabolic pathway; ASSOCIATED WITH 3p deletion syndrome (ortholog); Breast Neoplasms (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

methyltransferase 6, methylcytidine; methyltransferase like 6; methyltransferase-like protein 6

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955430	1,909,404 - 1,933,239 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955430	1,910,557 - 1,933,249 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3p deletion syndrome (ISO)

Breast Neoplasms (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

tRNA methylation (ISO)

tRNA modification (ISO)

Cellular Component

cytoplasm (ISO)

nucleus (ISO)

Molecular Function

enzyme binding (ISO)

protein binding (ISO)

tRNA (cytidine-3-)-methyltransferase activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

selenoamino acid metabolic pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Mettl6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955430	1,909,404 - 1,933,239 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955430	1,910,557 - 1,933,249 (-)	NCBI	ChiLan1.0	ChiLan1.0

METTL6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	15,381,275 - 15,427,643 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	15,381,275 - 15,440,566 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	15,451,267 - 15,469,051 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	15,426,381 - 15,444,046 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	15,389,607 - 15,407,274 (-)	NCBI		Celera
Cytogenetic Map	3	p25.1	NCBI
HuRef	3	15,386,707 - 15,404,381 (-)	NCBI		HuRef
CHM1_1	3	15,402,252 - 15,419,927 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	15,383,684 - 15,430,055 (-)	NCBI		T2T-CHM13v2.0

Mettl6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	31,180,775 - 31,217,007 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	31,195,535 - 31,216,997 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	31,463,715 - 31,495,059 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	31,473,578 - 31,495,040 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	32,291,984 - 32,308,163 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	30,307,807 - 30,323,986 (-)	NCBI		MGSCv36	mm8
Celera	14	27,737,717 - 27,753,955 (-)	NCBI		Celera
Cytogenetic Map	14	B	NCBI
cM Map	14	19.12	NCBI

Mettl6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	6,667,971 - 6,705,385 (-)	NCBI		GRCr8
mRatBN7.2	16	6,683,820 - 6,699,013 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	6,583,465 - 6,698,975 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	6,696,843 - 6,711,455 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	7,841,737 - 7,856,349 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	6,704,309 - 6,719,120 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	7,559,964 - 7,588,841 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	7,573,750 - 7,588,841 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	7,508,042 - 7,523,705 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	6,924,470 - 6,939,562 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	6,924,468 - 6,939,560 (-)	NCBI
Celera	16	8,491,500 - 8,506,251 (+)	NCBI		Celera
Cytogenetic Map	16	p16	NCBI

METTL6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	15,366,067 - 15,412,690 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	15,370,831 - 15,417,454 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	15,306,890 - 15,353,505 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	15,643,545 - 15,690,253 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	15,643,545 - 15,690,238 (-)	Ensembl	panpan1.1		panPan2

SH3BP5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	27,202,880 - 27,217,753 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	27,202,875 - 27,334,010 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	27,177,237 - 27,192,107 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	27,715,048 - 27,729,938 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	27,715,728 - 27,847,075 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	27,404,497 - 27,419,376 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	27,466,265 - 27,481,138 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	27,715,048 - 27,729,929 (+)	NCBI		UU_Cfam_GSD_1.0

Mettl6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	169,824,965 - 169,846,260 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	2,963,466 - 2,985,634 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	2,963,591 - 2,984,827 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

METTL6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	2,638,389 - 2,654,836 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	2,638,972 - 2,654,845 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	2,565,960 - 2,581,817 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

METTL6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	60,219,348 - 60,261,030 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	60,245,126 - 60,259,957 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	33,249,012 - 33,293,923 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mettl6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624822	5,254,938 - 5,282,742 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624822	5,253,659 - 5,349,292 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005387304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005387305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013515679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013515680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01029142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01029143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01143919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000006794 ⟹ ENSCLAP00000006684

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955430	1,909,404 - 1,933,239 (-)	Ensembl

RefSeq Acc Id:

XM_005387304 ⟹ XP_005387361

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955430	1,910,557 - 1,933,239 (-)	NCBI

Sequence:

show sequence

AGTAGCTGGAGAGGTCCTGCGGCGTGCGAAAGCCGCCCGGACGCAGCGGCCACTGTTCAGATTG
CGGGTTTCTCCGCTGGCTGCCCGGTTGCCCTTCCCAGGGCCTGGCCTGGCTGAGCGGCGCCGTG
TGACGCTGAGGTTTGAAAACTACCTGAAAAAAAAAAAAAGCATCTGAGAGAAAACTCTGGTGCT
CAGTATCAGCATGGATTTCTCAACTTATGGGAAGGTGGAGAATCATCAGCAATGTTAAATGTAT
TAGCAGCCCCCTGTGAGATGGCTTCCTTGCAAAGGAAAGGATTGCAGGCAAGGGTTCTCACCTC
TGAAGAAAAAGAGAAACTGAAGAGTGACCAAGCTTTGGTGTCTGATTTTAAACAGCAAAAACTG
GAAAATGAGGCTCAGAAGAACTGGGACCTTTTCTACAAAAGAAATAGCACCAATTTTTTCAAAA
ATAGACACTGGACCACCAGAGAGTTTGAGGAGCTAAAATCGTGTAGGGAGTTTGAAGGTCAAAA
ATTGACTATTCTTGAAGCTGGCTGTGGAGTTGGGAACTGTTTATTCCCGCTTTTAGAGGAAGAT
TTGAATATCTTTGCCTATGCCTGTGATTTTTCTCCAAGAGCAGTCGAATATGTTAAGCAAAATC
CACTGTATAATACAGAGAGATGCAAAGTATTCCAGTGTGATCTCACTAAAGATGACCTTGTGGA
TCACGTGCCACGAGAGTCTGTTGATGCTGTCATGTTGATATTTGTGCTGTCAGCTGTTCACCCT
GAAAAGATGCGCCTCGTCTTACAAAACATTTACAAGGTATTAAAACCAGGGAAAAATGTCTTAT
TCCGTGACTATGGACTATATGATCACACCATGCTTAGGTTTAAAGCCAGCAGCAAGCTTGGAGA
AAACTTTTATGTTAGACAAGATGGAACCAGATCATATTTTTTTACTGAGGAATTCCTGGCCCAG
CTCTTTGTGGACACAGGATATGAAGAAGTGGTAAACGAGTATGTGTTCCGAGAGACGGTGAATA
AAAAAGAAGGCCTGTGTGTGCCAAGAGTTTTCCTCCAGAGCAAATTTCGAAAACCTCCACAGGA
CCTCAGCCCTGCGGCCGTGCATCACCAGGTTGGCGATTATGTCTCCCCTTGATGAGAGAGTTTA
AGAATCACTCCTTCTTTGGTTTGTTTTTATATTTTAATTTTTAAATGAGCAGAAATAGTTTTAT
ATTTAAAAAGGAGCCTGTATGTGTGTATTAAATAAGTGCAAATAAATCTCAGAAACCTGAAAGT
AAAGAAAGTTTCATGGTGTAACATAGTTTAGCCATGTTGTCTGACTGTAAAATCCCATCAAGGA
AAACCCAAGAATGCTGTTGAGAGTTCAAGAGGTTCTTATTATTACTCATGTGACTCTTTAAGTG
TGCCCCTGGGTAGCCCTGTAGAAAGCCTGTAGAAAAATGAGGCCGAATGCACTGAAACACACCC
ACATGTATTTTTAACTTGAAGGATTATTCCCTTTTCCCAGTGTCTCTACTAGCAGGTTCTCCCA
CAGTTTGGGTGCCCAAGAAAGTGAGGCTACCATTAGCTTAGTATCACAACTCTAATCATAAAGA
GTTTAGCATTTGTGAAATCATACAGACCACAATGTCAGCCATTACAGCTTTGTTTTCATACACA
TGAAACAGCCATCAGGAAGGTAGTAAGTATTGCTTAACAGTACTACAGTGACCAGTGTTAGTTC
TGTAGTGCTATGTAGTGGGAGTATGTGTGTGCCCAGACATTCTCCTTTAACAAGCAGGTTACGT
TACTATGAGTAGGTTGTGAAATGAATTGCTCGCTAAAGGAAGAATTGTATATAGAACGTGTGTT
AGAGTGCTGAAGTAGAAGAAGCCACCGTAAGGTCACACTGCCACTCACATTCCCGTACCCTAAG
CTTGATGTGGTACATAAGTGTGAAAAGTCATTGACCAGGTAGGTTGTTAACCAAGGAATACCTG
TATGATATGTACATGTACATTTCATGTTATGTACTATATAGAATTGTAGATTTATTTGGTGTTT
TTGATATTTAGTATAGTTAAATAAATATACATTATAAAACAGCATAGTGAAATTATATTACAGG
ATTTGGAGTATCACCATCAGGGTTCAAGGTCAGTCCCCACTTCCGTCAACCTTAGTCTTTACAT
GTTCAGGACTGACACCCTAACTGTGAATAGCGGCACACACCTGCAATCCCATCACTTTGGGAGC
CTGAGGCAGGAGGGTCACAAGTTCAAGCCCAGCGCGGACAACTTCATGACTTAGTATCAGGGAC
CTGGCCAAGATCCCCAGCTGCCTGGATGAGGAATACTGGGTACAAGGAGTACAGCGAAAATGAA
ATAAGAAAGAGATCAGTTTAATGCACGACAGGCGGCAGAGACAGAGACACTCAAGCTAGCCACT
ATTTATTGGGTGTGCACAATGATTGGAGGGAGTATCAGATGACTCAGAGTAGCTTGTGCTAATG
AGGATCTTTATGTTGATGCGGGGGATAAGAAGGAGTTTGTTCCTTCCCCAAGGTGAGACTGCTT
TTATGACTACTGCGTTCTCAAGGAACTAGGATGTCTTCAGCTGGTGCAGCCTTGCCCTGGGGCG
CCACAGCATCGCGAGACCACTGAGGCCTCGTCTGTGACCGGAGGCACACGGGGTTATGTTCCTG
CATACCTCAGCCGGCCACGGGGCAAGGCACTAGGCCTCAGACAAGCCGTACTCACAATTTACCT
CTTAAATGATTTTCCCCAACAGTTATTTAGAATGGTTCTCGACAACTTACAAGACCCTGTCTCA
GAATAAAAAAGGCTAGGGATGTAGCTCAGTGCAGAGGCCCTGGTTTCAATCTCCAGTACCAAAA
AAGAAAGATGGGAAGAAAGAATGGAGAGGGGAGGAGGGAAGAGGGGAAGAAAGAGTGGTTTATT
TATAAAACGCAGTCAAATACTAGTTACTTCTGTTATTTTGTAGTCCCTTACAAAATAACTTCTG
CTGTGATTATGATGTCCAAATGGTAGAAGCAGTTCACGAGCCAATCCCTGTTCAGGAAGGACTT
CCCAGTCCTTGGAAAGGCCTCGCATTGGACTACGCCAGCACAGAGTGGCGCTAGATGCTAACTT
TTATTGCCTCTCCATTGCCATCTTAATGACAGTCCATTTTTCCTGTCATGGAGGGAGGAAAATA
CTTGTTACATATACATTTTCTGGATCAATTTCAGCTTAGATCGATCTTTGCTTCACTGTGGGTG
TAAGAAAGTGAGGGTGCTTTTACCCAACATTGAATCTACTTTGTCTCCTGAAGGCAGTTTGTTT
TCAACTAAATATGAACACCTGTAGGCACTCTCTGGGAAAGTGTCTACACGGTCTCCAGGCAAAT
TGAGGAGCGTAAAAACATACTGGACACGACCAAAAAAAAAAAAAAAAAAAAAAAAACATACTGG
ACACCATCAAGAACCCTAAGCTAAAAAAAAAAAGAACCCTAAGCTTTTATTTTTCCTGTGGATA
AATAAAATACCCCTTCACACCTTCCCCGTCCCTAACTGGCTCTGTGGGGTTTATTTTATTGCTG
CTTGGGATGAAGGCATAGCAAGATAGGGGGCCACAACATGCTTCTCGTGTGCCTCACAAATTAT
TTATAGTTCAGTAGTACTTGGTTCTCTCTATCACAGTTGTCACTCAAGAAAGGCAAAACTGTGA
AATAAAGCAAGAGTGTGTTTTGTAGGACTATGTTTTCGTTGGAGAGCTCGTTTTATACTGACCC
ATTACCACTAAATATTGCATTAAAAATAAAATGAGATGCTC

hide sequence

RefSeq Acc Id:

XM_005387305 ⟹ XP_005387362

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955430	1,910,557 - 1,933,239 (-)	NCBI

Sequence:

show sequence

AGTAGCTGGAGAGGTCCTGCGGCGTGCGAAAGCCGCCCGGACGCAGCGGCCACTGTTCAGATTG
CGGGTTTCTCCGCTGGCTGCCCGGTTGCCCTTCCCAGGGCCTGGCCTGGCTGAGCGGTGAGTGC
GCACTGCCCTGCCGTGCGGGTGAGGCGAGAGCTGATGACGGCGCCGTGTGACGCTGAGGTTTGA
AAACTACCTGAAAAAAAAAAAAAGCATCTGAGAGAAAACTCTGGTGCTCAGTATCAGCATGGAT
TTCTCAACTTATGGGAAGGTGGAGAATCATCAGCAATGTTAAATGTATTAGCAGCCCCCTGTGA
GATGGCTTCCTTGCAAAGGAAAGGATTGCAGGCAAGGGTTCTCACCTCTGAAGAAAAAGAGAAA
CTGAAGAGTGACCAAGCTTTGGTGTCTGATTTTAAACAGCAAAAACTGGAAAATGAGGCTCAGA
AGAACTGGGACCTTTTCTACAAAAGAAATAGCACCAATTTTTTCAAAAATAGACACTGGACCAC
CAGAGAGTTTGAGGAGCTAAAATCGTGTAGGGAGTTTGAAGGTCAAAAATTGACTATTCTTGAA
GCTGGCTGTGGAGTTGGGAACTGTTTATTCCCGCTTTTAGAGGAAGATTTGAATATCTTTGCCT
ATGCCTGTGATTTTTCTCCAAGAGCAGTCGAATATGTTAAGCAAAATCCACTGTATAATACAGA
GAGATGCAAAGTATTCCAGTGTGATCTCACTAAAGATGACCTTGTGGATCACGTGCCACGAGAG
TCTGTTGATGCTGTCATGTTGATATTTGTGCTGTCAGCTGTTCACCCTGAAAAGATGCGCCTCG
TCTTACAAAACATTTACAAGGTATTAAAACCAGGGAAAAATGTCTTATTCCGTGACTATGGACT
ATATGATCACACCATGCTTAGGTTTAAAGCCAGCAGCAAGCTTGGAGAAAACTTTTATGTTAGA
CAAGATGGAACCAGATCATATTTTTTTACTGAGGAATTCCTGGCCCAGCTCTTTGTGGACACAG
GATATGAAGAAGTGGTAAACGAGTATGTGTTCCGAGAGACGGTGAATAAAAAAGAAGGCCTGTG
TGTGCCAAGAGTTTTCCTCCAGAGCAAATTTCGAAAACCTCCACAGGACCTCAGCCCTGCGGCC
GTGCATCACCAGGTTGGCGATTATGTCTCCCCTTGATGAGAGAGTTTAAGAATCACTCCTTCTT
TGGTTTGTTTTTATATTTTAATTTTTAAATGAGCAGAAATAGTTTTATATTTAAAAAGGAGCCT
GTATGTGTGTATTAAATAAGTGCAAATAAATCTCAGAAACCTGAAAGTAAAGAAAGTTTCATGG
TGTAACATAGTTTAGCCATGTTGTCTGACTGTAAAATCCCATCAAGGAAAACCCAAGAATGCTG
TTGAGAGTTCAAGAGGTTCTTATTATTACTCATGTGACTCTTTAAGTGTGCCCCTGGGTAGCCC
TGTAGAAAGCCTGTAGAAAAATGAGGCCGAATGCACTGAAACACACCCACATGTATTTTTAACT
TGAAGGATTATTCCCTTTTCCCAGTGTCTCTACTAGCAGGTTCTCCCACAGTTTGGGTGCCCAA
GAAAGTGAGGCTACCATTAGCTTAGTATCACAACTCTAATCATAAAGAGTTTAGCATTTGTGAA
ATCATACAGACCACAATGTCAGCCATTACAGCTTTGTTTTCATACACATGAAACAGCCATCAGG
AAGGTAGTAAGTATTGCTTAACAGTACTACAGTGACCAGTGTTAGTTCTGTAGTGCTATGTAGT
GGGAGTATGTGTGTGCCCAGACATTCTCCTTTAACAAGCAGGTTACGTTACTATGAGTAGGTTG
TGAAATGAATTGCTCGCTAAAGGAAGAATTGTATATAGAACGTGTGTTAGAGTGCTGAAGTAGA
AGAAGCCACCGTAAGGTCACACTGCCACTCACATTCCCGTACCCTAAGCTTGATGTGGTACATA
AGTGTGAAAAGTCATTGACCAGGTAGGTTGTTAACCAAGGAATACCTGTATGATATGTACATGT
ACATTTCATGTTATGTACTATATAGAATTGTAGATTTATTTGGTGTTTTTGATATTTAGTATAG
TTAAATAAATATACATTATAAAACAGCATAGTGAAATTATATTACAGGATTTGGAGTATCACCA
TCAGGGTTCAAGGTCAGTCCCCACTTCCGTCAACCTTAGTCTTTACATGTTCAGGACTGACACC
CTAACTGTGAATAGCGGCACACACCTGCAATCCCATCACTTTGGGAGCCTGAGGCAGGAGGGTC
ACAAGTTCAAGCCCAGCGCGGACAACTTCATGACTTAGTATCAGGGACCTGGCCAAGATCCCCA
GCTGCCTGGATGAGGAATACTGGGTACAAGGAGTACAGCGAAAATGAAATAAGAAAGAGATCAG
TTTAATGCACGACAGGCGGCAGAGACAGAGACACTCAAGCTAGCCACTATTTATTGGGTGTGCA
CAATGATTGGAGGGAGTATCAGATGACTCAGAGTAGCTTGTGCTAATGAGGATCTTTATGTTGA
TGCGGGGGATAAGAAGGAGTTTGTTCCTTCCCCAAGGTGAGACTGCTTTTATGACTACTGCGTT
CTCAAGGAACTAGGATGTCTTCAGCTGGTGCAGCCTTGCCCTGGGGCGCCACAGCATCGCGAGA
CCACTGAGGCCTCGTCTGTGACCGGAGGCACACGGGGTTATGTTCCTGCATACCTCAGCCGGCC
ACGGGGCAAGGCACTAGGCCTCAGACAAGCCGTACTCACAATTTACCTCTTAAATGATTTTCCC
CAACAGTTATTTAGAATGGTTCTCGACAACTTACAAGACCCTGTCTCAGAATAAAAAAGGCTAG
GGATGTAGCTCAGTGCAGAGGCCCTGGTTTCAATCTCCAGTACCAAAAAAGAAAGATGGGAAGA
AAGAATGGAGAGGGGAGGAGGGAAGAGGGGAAGAAAGAGTGGTTTATTTATAAAACGCAGTCAA
ATACTAGTTACTTCTGTTATTTTGTAGTCCCTTACAAAATAACTTCTGCTGTGATTATGATGTC
CAAATGGTAGAAGCAGTTCACGAGCCAATCCCTGTTCAGGAAGGACTTCCCAGTCCTTGGAAAG
GCCTCGCATTGGACTACGCCAGCACAGAGTGGCGCTAGATGCTAACTTTTATTGCCTCTCCATT
GCCATCTTAATGACAGTCCATTTTTCCTGTCATGGAGGGAGGAAAATACTTGTTACATATACAT
TTTCTGGATCAATTTCAGCTTAGATCGATCTTTGCTTCACTGTGGGTGTAAGAAAGTGAGGGTG
CTTTTACCCAACATTGAATCTACTTTGTCTCCTGAAGGCAGTTTGTTTTCAACTAAATATGAAC
ACCTGTAGGCACTCTCTGGGAAAGTGTCTACACGGTCTCCAGGCAAATTGAGGAGCGTAAAAAC
ATACTGGACACGACCAAAAAAAAAAAAAAAAAAAAAAAAACATACTGGACACCATCAAGAACCC
TAAGCTAAAAAAAAAAAGAACCCTAAGCTTTTATTTTTCCTGTGGATAAATAAAATACCCCTTC
ACACCTTCCCCGTCCCTAACTGGCTCTGTGGGGTTTATTTTATTGCTGCTTGGGATGAAGGCAT
AGCAAGATAGGGGGCCACAACATGCTTCTCGTGTGCCTCACAAATTATTTATAGTTCAGTAGTA
CTTGGTTCTCTCTATCACAGTTGTCACTCAAGAAAGGCAAAACTGTGAAATAAAGCAAGAGTGT
GTTTTGTAGGACTATGTTTTCGTTGGAGAGCTCGTTTTATACTGACCCATTACCACTAAATATT
GCATTAAAAATAAAATGAGATGCTC

hide sequence

RefSeq Acc Id:

XM_013515679 ⟹ XP_013371133

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955430	1,914,847 - 1,933,249 (-)	NCBI

Sequence:

show sequence

CTTTATCGGAAGTAGCTGGAGAGGTCCTGCGGCGTGCGAAAGCCGCCCGGACGCAGCGGCCACT
GTTCAGATTGCGGGTTTCTCCGCTGGCTGCCCGGTTGCCCTTCCCAGGGCCTGGCCTGGCTGAG
CGGCGCCGTGTGACGCTGAGGTTTGAAAACTACCTGAAAAAAAAAAAAAGCATCTGAGAGAAAA
CTCTGGTGCTCAGTATCAGCATGGATTTCTCAACTTATGGGAAGGTGGAGAATCATCAGCAATG
TTAAATGTATTAGCAGCCCCCTGTGAGATGGCTTCCTTGCAAAGGAAAGGATTGCAGGCAAGGG
TTCTCACCTCTGAAGAAAAAGAGAAACTGAAGAGTGACCAAGCTTTGGTGTCTGATTTTAAACA
GCAAAAACTGGAAAATGAGGCTCAGAAGAACTGGGACCTTTTCTACAAAAGAAATAGCACCAAT
TTTTTCAAAAATAGACACTGGACCACCAGAGAGTTTGAGGAGCTAAAATCGTGTAGGGAGTTTG
AAGGTCAAAAATTGACTATTCTTGAAGCTGGCTGTGGAGTTGGGAACTGTTTATTCCCGCTTTT
AGAGGAAGATTTGAATATCTTTGCCTATGCCTGTGATTTTTCTCCAAGAGCAGTCGAATATGTT
AAGCAAAATCCACTGTATAATACAGAGAGATGCAAAGTATTCCAGTGTGATCTCACTAAAGATG
ACCTTGTGGATCACGTGCCACGAGAGTCTGTTGATGCTGTCATGTTGATATTTGTGCTGTCAGC
TGTTCACCCTGAAAAGATGCGCCTCGTCTTACAAAACATTTACAAGCCTTTCCTTCCTTCTGCA
GTGAAGAATAAGTCCCATGTGAACTTTTTCAGAATTTTTCCTTCTTACTTATTAACATTTGAAA
ACTTAGCCTTTCTTCAAGGTATTAAAACCAGGGAAAAATGTCTTATTCCGTGACTATGGACTAT
ATGATCACACCATGCTTAGGTTTAAAGCCAGCAGCAAGCTTGGAGAAAACTTTTATGTTAGACA
AGATGGAACCAGATCA

hide sequence

RefSeq Acc Id:

XM_013515680 ⟹ XP_013371134

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955430	1,914,883 - 1,933,244 (-)	NCBI

Sequence:

show sequence

TCGGAAGTAGCTGGAGAGGTCCTGCGGCGTGCGAAAGCCGCCCGGACGCAGCGGCCACTGTTCA
GATTGCGGGTTTCTCCGCTGGCTGCCCGGTTGCCCTTCCCAGGGCCTGGCCTGGCTGAGCGGCG
CCGTGTGACGCTGAGGTTTGAAAACTACCTGAAAAAAAAAAAAAGCATCTGAGAGAAAACTCTG
GTGCTCAGTATCAGCATGGATTTCTCAACTTATGGGAAGGTGGAGAATCATCAGCAATGTTAAA
TGTATTAGCAGCCCCCTGTGAGATGGCTTCCTTGCAAAGGAAAGGATTGCAGGCAAGGGTTCTC
ACCTCTGAAGAAAAAGAGAAACTGAAGAGTGACCAAGCTTTGGTGTCTGATTTTAAACAGCAAA
AACTGGAAAATGAGGCTCAGAAGAACTGGGACCTTTTCTACAAAAGAAATAGCACCAATTTTTT
CAAAAATAGACACTGGACCACCAGAGAGTTTGAGGAGCTAAAATCGTGTAGGGAGTTTGAAGGT
CAAAAATTGACTATTCTTGAAGCTGGCTGTGGAGTTGGGAACTGTTTATTCCCGCTTTTAGAGG
AAGATTTGAATATCTTTGCCTATGCCTGTGATTTTTCTCCAAGAGCAGTCGAATATGTTAAGCA
AAATCCACTGTATAATACAGAGAGATGCAAAGTATTCCAGTGTGATCTCACTAAAGATGACCTT
GTGGATCACGTGCCACGAGAGTCTGTTGATGCTGTCATGTTGATATTTGTGCTGTCAGCTGTTC
ACCCTGAAAAGATGCGCCTCGTCTTACAAAACATTTACAAGATAAGAAAACATTCTGAGGCTAG
TGAATGGAAAGAACTGGGGTTTGAATCGTGACTTCCAGAGTCCTGAGTATTAAAACCAGGGAAA
AATGTCTTATTCCGTGACTATGGACTATATGATCACACCATGCTTAGGTTTAAAGCCAGCAGCA
AGCTTGGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005387361	(Get FASTA)	NCBI Sequence Viewer
	XP_005387362	(Get FASTA)	NCBI Sequence Viewer
	XP_013371133	(Get FASTA)	NCBI Sequence Viewer
	XP_013371134	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000006684
	ENSCLAP00000006684.1

RefSeq Acc Id:	XP_005387361 ⟸ XM_005387304
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UX82 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLNVLAAPCEMASLQRKGLQARVLTSEEKEKLKSDQALVSDFKQQKLENEAQKNWDLFYKRNST NFFKNRHWTTREFEELKSCREFEGQKLTILEAGCGVGNCLFPLLEEDLNIFAYACDFSPRAVEY VKQNPLYNTERCKVFQCDLTKDDLVDHVPRESVDAVMLIFVLSAVHPEKMRLVLQNIYKVLKPG KNVLFRDYGLYDHTMLRFKASSKLGENFYVRQDGTRSYFFTEEFLAQLFVDTGYEEVVNEYVFR ETVNKKEGLCVPRVFLQSKFRKPPQDLSPAAVHHQVGDYVSP hide sequence

RefSeq Acc Id:	XP_005387362 ⟸ XM_005387305
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UX82 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLNVLAAPCEMASLQRKGLQARVLTSEEKEKLKSDQALVSDFKQQKLENEAQKNWDLFYKRNST NFFKNRHWTTREFEELKSCREFEGQKLTILEAGCGVGNCLFPLLEEDLNIFAYACDFSPRAVEY VKQNPLYNTERCKVFQCDLTKDDLVDHVPRESVDAVMLIFVLSAVHPEKMRLVLQNIYKVLKPG KNVLFRDYGLYDHTMLRFKASSKLGENFYVRQDGTRSYFFTEEFLAQLFVDTGYEEVVNEYVFR ETVNKKEGLCVPRVFLQSKFRKPPQDLSPAAVHHQVGDYVSP hide sequence

RefSeq Acc Id:

XP_013371133 ⟸ XM_013515679

- Peptide Label:

isoform X2

- Sequence:

show sequence

MLNVLAAPCEMASLQRKGLQARVLTSEEKEKLKSDQALVSDFKQQKLENEAQKNWDLFYKRNST
NFFKNRHWTTREFEELKSCREFEGQKLTILEAGCGVGNCLFPLLEEDLNIFAYACDFSPRAVEY
VKQNPLYNTERCKVFQCDLTKDDLVDHVPRESVDAVMLIFVLSAVHPEKMRLVLQNIYKPFLPS
AVKNKSHVNFFRIFPSYLLTFENLAFLQGIKTREKCLIP

hide sequence

RefSeq Acc Id:

XP_013371134 ⟸ XM_013515680

- Peptide Label:

isoform X3

- Sequence:

show sequence

MLNVLAAPCEMASLQRKGLQARVLTSEEKEKLKSDQALVSDFKQQKLENEAQKNWDLFYKRNST
NFFKNRHWTTREFEELKSCREFEGQKLTILEAGCGVGNCLFPLLEEDLNIFAYACDFSPRAVEY
VKQNPLYNTERCKVFQCDLTKDDLVDHVPRESVDAVMLIFVLSAVHPEKMRLVLQNIYKIRKHS
EASEWKELGFES

hide sequence

RefSeq Acc Id:

ENSCLAP00000006684 ⟸ ENSCLAT00000006794

Protein Domains

Methyltransferase type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000004710	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000006794	ENTREZGENE
	ENSCLAT00000006794.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.150	UniProtKB/TrEMBL
InterPro	Methyltransf_12	UniProtKB/TrEMBL
	MeTrfase	UniProtKB/TrEMBL
	SAM-dependent_MTases	UniProtKB/TrEMBL
NCBI Gene	Mettl6	ENTREZGENE
PANTHER	PTHR22809	UniProtKB/TrEMBL
	TRNA N(3)-METHYLCYTIDINE METHYLTRANSFERASE METTL6	UniProtKB/TrEMBL
Pfam	Methyltransf_12	UniProtKB/TrEMBL
PIRSF	Mettl2_prd	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53335	UniProtKB/TrEMBL
UniProt	A0A8C2UX82	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-05-30	Mettl6	methyltransferase 6, tRNA N3-cytidine	Mettl6	methyltransferase 6, methylcytidine	Symbol and/or name change	5135510	APPROVED
2021-05-26	Mettl6	methyltransferase 6, methylcytidine	Mettl6	methyltransferase like 6	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - SMPDB