Lrrc57 (leucine rich repeat containing 57)

Gene: Lrrc57 (leucine rich repeat containing 57) Chinchilla lanigera

Analyze

Symbol:

Lrrc57

Name:

leucine rich repeat containing 57

RGD ID:

9053164

Description:

ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

leucine-rich repeat-containing protein 57

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	9,230,362 - 9,237,799 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	9,230,362 - 9,237,799 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

genetic disease (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Lrrc57
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	9,230,362 - 9,237,799 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	9,230,362 - 9,237,799 (-)	NCBI	ChiLan1.0	ChiLan1.0

LRRC57
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	42,528,327 - 42,548,793 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	42,537,820 - 42,548,802 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	42,830,027 - 42,840,991 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	40,622,014 - 40,628,292 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	19,602,426 - 19,608,708 (-)	NCBI		Celera
Cytogenetic Map	15	q15.2	NCBI
HuRef	15	19,682,473 - 19,688,755 (-)	NCBI		HuRef
CHM1_1	15	42,953,162 - 42,959,444 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	40,334,371 - 40,354,843 (-)	NCBI		T2T-CHM13v2.0

Lrrc57
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	120,434,719 - 120,439,989 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	120,434,719 - 120,440,001 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	120,604,238 - 120,609,508 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	120,604,238 - 120,609,520 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	120,429,974 - 120,435,244 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	120,295,679 - 120,300,715 (-)	NCBI		MGSCv36	mm8
Celera	2	121,757,029 - 121,762,300 (-)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	60.37	NCBI

Lrrc57
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	127,998,535 - 128,007,004 (-)	NCBI		GRCr8
mRatBN7.2	3	107,544,786 - 107,553,256 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	107,547,405 - 107,553,256 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	111,222,226 - 111,228,070 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	119,817,799 - 119,823,643 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	117,478,192 - 117,484,036 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	112,365,936 - 112,371,787 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	112,365,938 - 112,385,528 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	3	112,370,057 - 112,371,664 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	118,912,832 - 118,918,683 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	107,365,961 - 107,371,816 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	107,262,390 - 107,268,061 (-)	NCBI
Celera	3	106,454,979 - 106,460,831 (-)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

LRRC57
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	31,788,619 - 31,799,619 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	35,945,583 - 35,956,606 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	21,499,139 - 21,510,154 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	39,659,381 - 39,666,068 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	39,659,387 - 39,666,068 (-)	Ensembl	panpan1.1		panPan2

LRRC57
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	9,497,328 - 9,502,235 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	9,554,594 - 9,559,683 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	9,632,152 - 9,637,242 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	9,632,159 - 9,637,170 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	9,551,416 - 9,556,506 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	9,657,980 - 9,663,060 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	9,790,695 - 9,795,782 (-)	NCBI		UU_Cfam_GSD_1.0

Lrrc57
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	87,974,785 - 87,978,759 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	5,820,579 - 5,827,084 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	5,822,165 - 5,826,894 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LRRC57
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	128,839,204 - 128,847,431 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	128,839,137 - 128,845,749 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	143,731,688 - 143,738,556 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LRRC57
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	40,427,588 - 40,434,108 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	40,427,887 - 40,432,553 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	100,578,130 - 100,584,784 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lrrc57
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624804	9,648,956 - 9,656,754 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624804	9,648,956 - 9,656,464 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005381347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005381348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005381349	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01017080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01017081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01124064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000022380 ⟹ ENSCLAP00000022175

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955416	9,230,362 - 9,237,799 (-)	Ensembl

RefSeq Acc Id:

XM_005381347 ⟹ XP_005381404

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	9,230,362 - 9,237,799 (-)	NCBI

Sequence:

show sequence

GCGTAGGCTCGGCGCGAGAAGATGACGCCACTGCGCGGTCCGGCGCGGGCGGAAGCCCTGGGAG
CGCATCCCGGACTAGCTCGGGTGCAGGGCATTCTGCTGAGGAGTGCTCTCTCTTCCGAGCGGGA
CCTGAAGCGCGGCACTAAGATGGGAAACAGTGCCCTCCGAGCTCATGTGGAAACGGCGCAGAAA
ACGGGTGTCTTTCAGCTTAAGGATCGTGGACTGACCGAGTTCCCCGCAGAGTTGCAGAAGCTGA
CGAGCAACCTTAGGACTATCGACTTGTCCAACAACAAGATCGAGAATCTCCCGCCTCTGCTGAT
AGGGAAGTTCACTCTGCTGAAGAGCCTGTCCCTGAACAGCAACAAACTGACTGTTCTACCGGAT
GAGTTATGCAATCTGAAAAAACTTGAGACGCTTAGCCTAAACAACAATCTCCTAAGAGAACTGC
CAGCTACCTTTGGGCAGCTCTCTGCCCTCAAGACCCTGAGCCTGTCTGGGAACCAACTGGGAGC
ACTGCCACCCCAACTTTGTAGCCTCCGGCACCTGGATGTGATGGATCTCTCTAAGAACCGGATT
CGGAGTATACCTGACCTAGTCGGGGAGCTGCAGGTCATTGAGCTCAACCTCAACCAGAACCAGA
TATCTCAGATCTCAGTAAAGATATCTTGCTGTCCTCGCCTTAAAGTTCTTCGCCTGGAGGAGAA
CTGTCTGGAACTCAGCATGCTTCCACAGAGCATCCTCAGTGATTCCCAGATCTGTCTGCTCGCT
GTGGAAGGCAATCTTTTTGAAATAAAGAAACTTCGAGAACTGGAAGGCTATGATAAGTACATGG
AGAGGTTCACAGCCACCAAGAAGAAGTTTGCATGATCTCCAGGTCTGTGGGAACCTGACATGGA
ACCCTGCTTGGAAACTGGCTGCATCAGAGACTCCTGTTGTGCATGCAGGATATTTGCAGTAAGA
AGATGACACTCCAGGAGATCATATTTCACTCAATAATCTTCCTTTTCAGGGCTATCTCACATAA
GCCAAAAGAAAAGGAGTCAGGAGACATAAAGAGTGCTCCACTTCGAGTCACGGATAGGCAATGG
ACAGTGTTGCTCCTCAACACCAGTATGTAGTTGCTATTTATGAGGTGCGGGATGCTGCCTAACA
GAATAGCTGCACCACAGCTTGAGACTGCTTTATTTCAATGTGAGCTTTCATAAAGTTGGCTGCC
ATTCCACCTCTGTGTTCGTACTTCATATTTTTATGACATTCATGTAAGTTGTGAGAAGCTGGTA
TAGTTAATCCTAGGATTTATTATTCCAGTACATCAGTTCAGTTGCAGTGTTTATACTTTGAGTT
TGGGATGTATCTGTATGGCTGTCTTGACTAAAGTGTGCTTTAATTAGAAAAGCACCAATACTAC
ACTAAGAGATGCTCCTGAAGGCTGCAGTAGCAATTTGTTTACTATTGCAGGTGCCTTACTGGTG
GAGGGCTCTGAAAAGCTAAAACTGTATATGCAACACTTATAAAATATAAGAGAGATTGTAATAA
TCAAGATTTTCTTGAAGCTTTGTTAAACAAATTATGTCTTATTTCTGGTAGTCTTTCCTCATTT
TTGTATTTATAACTCTACTAATAAAATTACCTTCAGAAAATAATTGCTATAATATTTTTAAGAT
GACCTATGTTTATTAAGTTTATTCTCTGAATGAGAATGATTCTTTACTAAATAAATAATTTTTA
ATGAA

hide sequence

RefSeq Acc Id:

XM_005381348 ⟹ XP_005381405

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	9,230,362 - 9,237,799 (-)	NCBI

Sequence:

show sequence

GCGTAGGCTCGGCGCGAGAAGATGACGCCACTGCGCGGTCCGGCGCGGGCGGAAGCCCTGGGAG
CGCATCCCGGACTAGCTCGGGTGCAGGGCATTCTGCTGAGGAGTGCTCTCTCTTCCGAGCGGGA
CCTGAAGCGCGGCACTAAGATGGGAAACAGTGCCCTCCGAGCTCATGTGGAAACGGCGCAGAAA
ACGGGTGTCTTTCAGCTTAAGGATCGTGGACTGACCGAGTTCCCCGCAGAGTTGCAGAAGCTGA
CGAGCAACCTTAGGACTATCGACTTGTCCAACAACAAGATCGAGAATCTCCCGCCTCTGCTGAT
AGGGAAGTTCACTCTGCTGAAGAGCCTGTCCCTGAACAGCAACAAACTGACTGTTCTACCGGAT
GAGTTATGCAATCTGAAAAAACTTGAGACGCTTAGCCTAAACAACAATCTCCTAAGAGAACTGC
CAGCTACCTTTGGGCAGCTCTCTGCCCTCAAGACCCTGAGCCTGTCTGGGAACCAACTGGGAGC
ACTGCCACCCCAACTTTGTAGCCTCCGGCACCTGGATGTGATGGATCTCTCTAAGAACCGGATT
CGGAGTATACCTGACCTAGTCGGGGAGCTGCAGGTCATTGAGCTCAACCTCAACCAGAACCAGT
TCTTCGCCTGGAGGAGAACTGTCTGGAACTCAGCATGCTTCCACAGAGCATCCTCAGTGATTCC
CAGATCTGTCTGCTCGCTGTGGAAGGCAATCTTTTTGAAATAAAGAAACTTCGAGAACTGGAAG
GCTATGATAAGTACATGGAGAGGTTCACAGCCACCAAGAAGAAGTTTGCATGATCTCCAGGTCT
GTGGGAACCTGACATGGAACCCTGCTTGGAAACTGGCTGCATCAGAGACTCCTGTTGTGCATGC
AGGATATTTGCAGTAAGAAGATGACACTCCAGGAGATCATATTTCACTCAATAATCTTCCTTTT
CAGGGCTATCTCACATAAGCCAAAAGAAAAGGAGTCAGGAGACATAAAGAGTGCTCCACTTCGA
GTCACGGATAGGCAATGGACAGTGTTGCTCCTCAACACCAGTATGTAGTTGCTATTTATGAGGT
GCGGGATGCTGCCTAACAGAATAGCTGCACCACAGCTTGAGACTGCTTTATTTCAATGTGAGCT
TTCATAAAGTTGGCTGCCATTCCACCTCTGTGTTCGTACTTCATATTTTTATGACATTCATGTA
AGTTGTGAGAAGCTGGTATAGTTAATCCTAGGATTTATTATTCCAGTACATCAGTTCAGTTGCA
GTGTTTATACTTTGAGTTTGGGATGTATCTGTATGGCTGTCTTGACTAAAGTGTGCTTTAATTA
GAAAAGCACCAATACTACACTAAGAGATGCTCCTGAAGGCTGCAGTAGCAATTTGTTTACTATT
GCAGGTGCCTTACTGGTGGAGGGCTCTGAAAAGCTAAAACTGTATATGCAACACTTATAAAATA
TAAGAGAGATTGTAATAATCAAGATTTTCTTGAAGCTTTGTTAAACAAATTATGTCTTATTTCT
GGTAGTCTTTCCTCATTTTTGTATTTATAACTCTACTAATAAAATTACCTTCAGAAAATAATTG
CTATAATATTTTTAAGATGACCTATGTTTATTAAGTTTATTCTCTGAATGAGAATGATTCTTTA
CTAAATAAATAATTTTTAATGAA

hide sequence

RefSeq Acc Id:

XM_005381349 ⟹ XP_005381406

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955416	9,230,362 - 9,237,595 (-)	NCBI

Sequence:

show sequence

TGCAGGACTGGGCGCTCGGGCTGAGTGTTCTTCCCTTTCTTCCTTGTCCCTCTTGGCTGGCGCC
GAGGAGCCAGGGATCGGCAGAAGGGACCTGAAGCGCGGCACTAAGATGGGAAACAGTGCCCTCC
GAGCTCATGTGGAAACGGCGCAGAAAACGGGTGTCTTTCAGCTTAAGGATCGTGGACTGACCGA
GTTCCCCGCAGAGTTGCAGAAGCTGACGAGCAACCTTAGGACTATCGACTTGTCCAACAACAAG
ATCGAGAATCTCCCGCCTCTGCTGATAGGGAAGTTCACTCTGCTGAAGAGCCTGTCCCTGAACA
GCAACAAACTGACTGTTCTACCGGATGAGTTATGCAATCTGAAAAAACTTGAGACGCTTAGCCT
AAACAACAATCTCCTAAGAGAACTGCCAGCTACCTTTGGGCAGCTCTCTGCCCTCAAGACCCTG
AGCCTGTCTGGGAACCAACTGGGAGCACTGCCACCCCAACTTTGTAGCCTCCGGCACCTGGATG
TGATGGATCTCTCTAAGAACCGGATTCGGAGTATACCTGACCTAGTCGGGGAGCTGCAGGTCAT
TGAGCTCAACCTCAACCAGAACCAGATATCTCAGATCTCAGTAAAGATATCTTGCTGTCCTCGC
CTTAAAGTTCTTCGCCTGGAGGAGAACTGTCTGGAACTCAGCATGCTTCCACAGAGCATCCTCA
GTGATTCCCAGATCTGTCTGCTCGCTGTGGAAGGCAATCTTTTTGAAATAAAGAAACTTCGAGA
ACTGGAAGGCTATGATAAGTACATGGAGAGGTTCACAGCCACCAAGAAGAAGTTTGCATGATCT
CCAGGTCTGTGGGAACCTGACATGGAACCCTGCTTGGAAACTGGCTGCATCAGAGACTCCTGTT
GTGCATGCAGGATATTTGCAGTAAGAAGATGACACTCCAGGAGATCATATTTCACTCAATAATC
TTCCTTTTCAGGGCTATCTCACATAAGCCAAAAGAAAAGGAGTCAGGAGACATAAAGAGTGCTC
CACTTCGAGTCACGGATAGGCAATGGACAGTGTTGCTCCTCAACACCAGTATGTAGTTGCTATT
TATGAGGTGCGGGATGCTGCCTAACAGAATAGCTGCACCACAGCTTGAGACTGCTTTATTTCAA
TGTGAGCTTTCATAAAGTTGGCTGCCATTCCACCTCTGTGTTCGTACTTCATATTTTTATGACA
TTCATGTAAGTTGTGAGAAGCTGGTATAGTTAATCCTAGGATTTATTATTCCAGTACATCAGTT
CAGTTGCAGTGTTTATACTTTGAGTTTGGGATGTATCTGTATGGCTGTCTTGACTAAAGTGTGC
TTTAATTAGAAAAGCACCAATACTACACTAAGAGATGCTCCTGAAGGCTGCAGTAGCAATTTGT
TTACTATTGCAGGTGCCTTACTGGTGGAGGGCTCTGAAAAGCTAAAACTGTATATGCAACACTT
ATAAAATATAAGAGAGATTGTAATAATCAAGATTTTCTTGAAGCTTTGTTAAACAAATTATGTC
TTATTTCTGGTAGTCTTTCCTCATTTTTGTATTTATAACTCTACTAATAAAATTACCTTCAGAA
AATAATTGCTATAATATTTTTAAGATGACCTATGTTTATTAAGTTTATTCTCTGAATGAGAATG
ATTCTTTACTAAATAAATAATTTTTAATGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005381404	(Get FASTA)	NCBI Sequence Viewer
	XP_005381405	(Get FASTA)	NCBI Sequence Viewer
	XP_005381406	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000022175
	ENSCLAP00000022175.1

RefSeq Acc Id:

XP_005381405 ⟸ XM_005381348

- Peptide Label:

isoform X2

- Sequence:

show sequence

MTPLRGPARAEALGAHPGLARVQGILLRSALSSERDLKRGTKMGNSALRAHVETAQKTGVFQLK
DRGLTEFPAELQKLTSNLRTIDLSNNKIENLPPLLIGKFTLLKSLSLNSNKLTVLPDELCNLKK
LETLSLNNNLLRELPATFGQLSALKTLSLSGNQLGALPPQLCSLRHLDVMDLSKNRIRSIPDLV
GELQVIELNLNQNQFFAWRRTVWNSACFHRASSVIPRSVCSLWKAIFLK

hide sequence

RefSeq Acc Id:

XP_005381404 ⟸ XM_005381347

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTPLRGPARAEALGAHPGLARVQGILLRSALSSERDLKRGTKMGNSALRAHVETAQKTGVFQLK
DRGLTEFPAELQKLTSNLRTIDLSNNKIENLPPLLIGKFTLLKSLSLNSNKLTVLPDELCNLKK
LETLSLNNNLLRELPATFGQLSALKTLSLSGNQLGALPPQLCSLRHLDVMDLSKNRIRSIPDLV
GELQVIELNLNQNQISQISVKISCCPRLKVLRLEENCLELSMLPQSILSDSQICLLAVEGNLFE
IKKLRELEGYDKYMERFTATKKKFA

hide sequence

RefSeq Acc Id:	XP_005381406 ⟸ XM_005381349
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2W4N9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGNSALRAHVETAQKTGVFQLKDRGLTEFPAELQKLTSNLRTIDLSNNKIENLPPLLIGKFTLL KSLSLNSNKLTVLPDELCNLKKLETLSLNNNLLRELPATFGQLSALKTLSLSGNQLGALPPQLC SLRHLDVMDLSKNRIRSIPDLVGELQVIELNLNQNQISQISVKISCCPRLKVLRLEENCLELSM LPQSILSDSQICLLAVEGNLFEIKKLRELEGYDKYMERFTATKKKFA hide sequence

RefSeq Acc Id:

ENSCLAP00000022175 ⟸ ENSCLAT00000022380

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000015206	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000022380	ENTREZGENE
	ENSCLAT00000022380.1	UniProtKB/TrEMBL
Gene3D-CATH	3.80.10.10	UniProtKB/TrEMBL
InterPro	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
NCBI Gene	Lrrc57	ENTREZGENE
PANTHER	NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE-RELATED	UniProtKB/TrEMBL
	PTHR48051	UniProtKB/TrEMBL
Pfam	LRR_1	UniProtKB/TrEMBL
	LRR_8	UniProtKB/TrEMBL
PRINTS	LEURICHRPT	UniProtKB/TrEMBL
PROSITE	LRR	UniProtKB/TrEMBL
SMART	LRR_BAC	UniProtKB/TrEMBL
	LRR_SD22	UniProtKB/TrEMBL
	LRR_TYP	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/TrEMBL
UniProt	A0A8C2W4N9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar