Tmem255a (transmembrane protein 255A)

Gene: Tmem255a (transmembrane protein 255A) Chinchilla lanigera

Analyze

Symbol:

Tmem255a

Name:

transmembrane protein 255A

RGD ID:

9035996

Description:

INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Danon disease (ortholog); genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955572	1,574,739 - 1,628,124 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955572	1,574,785 - 1,628,770 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Danon disease (ISO)

genetic disease (ISO)

syndromic X-linked intellectual disability 14 (ISO)

syndromic X-linked intellectual disability Cabezas type (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

response to bacterium (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Tmem255a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955572	1,574,739 - 1,628,124 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955572	1,574,785 - 1,628,770 (+)	NCBI	ChiLan1.0	ChiLan1.0

TMEM255A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	120,251,433 - 120,311,461 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	120,258,650 - 120,311,556 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	119,392,505 - 119,445,316 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	119,276,533 - 119,329,419 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	119,858,090 - 119,910,982 (-)	NCBI		Celera
Cytogenetic Map	X	q24	NCBI
HuRef	X	108,844,953 - 108,897,433 (-)	NCBI		HuRef
CHM1_1	X	119,303,796 - 119,356,597 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	118,626,490 - 118,686,494 (-)	NCBI		T2T-CHM13v2.0

Tmem255a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	37,285,450 - 37,341,373 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	37,285,450 - 37,341,316 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	38,196,573 - 38,252,496 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	38,196,573 - 38,252,439 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	35,550,478 - 35,605,658 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	34,441,933 - 34,497,024 (-)	NCBI		MGSCv36	mm8
Celera	X	25,842,880 - 25,898,015 (-)	NCBI		Celera
Cytogenetic Map	X	A3.3	NCBI
cM Map	X	22.46	NCBI

Tmem255a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	121,836,443 - 121,900,718 (-)	NCBI		GRCr8
mRatBN7.2	X	116,970,793 - 117,035,008 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	116,970,695 - 117,035,008 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	119,070,181 - 119,133,290 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	122,639,330 - 122,702,426 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	120,185,208 - 120,248,288 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	124,400,686 - 124,465,156 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	124,328,735 - 124,465,110 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	124,486,033 - 124,550,923 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	7,098,688 - 7,161,741 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	7,104,243 - 7,167,297 (+)	NCBI
Celera	X	116,188,387 - 116,245,740 (-)	NCBI		Celera
Cytogenetic Map	X	q35	NCBI

TMEM255A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	119,805,876 - 119,858,497 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	119,809,481 - 119,862,101 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	109,530,719 - 109,583,320 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	119,718,047 - 119,770,580 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	119,718,047 - 119,770,580 (-)	Ensembl	panpan1.1		panPan2

TMEM255A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	92,251,820 - 92,301,660 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	92,251,816 - 92,301,558 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	78,280,937 - 78,333,039 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	93,989,942 - 94,041,992 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	93,989,944 - 94,041,993 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	91,444,928 - 91,497,015 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	93,201,798 - 93,253,853 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	92,982,830 - 93,034,915 (-)	NCBI		UU_Cfam_GSD_1.0

Tmem255a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	91,206,027 - 91,265,888 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936479	9,721,633 - 9,781,509 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936479	9,721,602 - 9,781,468 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM255A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	98,413,949 - 98,464,660 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	98,412,286 - 98,464,683 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	113,038,431 - 113,089,119 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM255A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666065	32,981,264 - 33,033,287 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem255a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624931	69,514 - 148,512 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624931	69,622 - 148,455 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005413666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005413667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005413668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013509442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01074955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01236203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000000676 ⟹ ENSCLAP00000000643

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955572	1,574,739 - 1,625,854 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000000677 ⟹ ENSCLAP00000000644

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955572	1,575,001 - 1,628,124 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000000678 ⟹ ENSCLAP00000000645

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955572	1,575,001 - 1,625,854 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000000679 ⟹ ENSCLAP00000000646

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955572	1,575,001 - 1,625,854 (+)	Ensembl

RefSeq Acc Id:

XM_005413666 ⟹ XP_005413723

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955572	1,574,785 - 1,628,025 (+)	NCBI

Sequence:

show sequence

CTCCGGGAGGAGAGGGAGGCAGAAGAGGAGGGAGGGAGAAGAGGGGAAGGGAGGGGGAGGCGGC
ACTTGGTCTGCAGCTCTCTACCAGAGGCAGTCTCTCTCAGCTCTCGGAGAGACCGGGAGAGGCT
GCCGTGGAGTAGGATGGTCTGCCAGGCTCCTTGAGTCAGGGGCGCCTAGAGCAGCTTCGTGGAC
TGGGGAGACCGGGCAGCTTTCACCATGCATCAGTCCCTGACTCAGCAGCGGTCCAGCGACATGT
CCCTGCCCGATTCTATGGGAGCCTTCAATCGGAGGAAACGAAATTCCATCTATGTCACCGTGAC
TTTGCTTATTGTGTCCATGTTAATTCTCACCGTGGGCCTTGCTGCAACCACCAGGACCCAGAAT
GTGACTGTTGGAGGTTATTACCCAGGAGTTATTCTCGGCTTTGGATCGTTCCTTGGAATCATTG
GATCAAACCTTGTTGAGAACAAGCGGCAGATGCTGGTGGCTTCAATTGTGTTTATCAGCTTTGG
TGTGATTGCAGCTTTCTGTTGTGCCATAGTTGATGGGGTCTTTGCTGCCAGACACATCGATCTG
AAACCACTCTATGCTAACCGGTGCCACTATGTCCCCAAAACATCCCAGAAGGAGGCTGAAGAGG
TCATAAGTTCCTCAACCAAAAATTCTCCTTCCGCGAGGGTTATGAGGAACCTTACCCAGACAGC
TAGAGAGGTGAACTGCCCTCACCTCAGCCGTGGGTTCTGCACTCCTCGCATCCGGGGTAACACC
TGCTTCTGCTGTGACCTCTACAACTGTGGCAACAGGGTGGAGATCACCGGTGGCTACTATGAGT
ACATCGATGTCAGCAGCTGCCAGGACATCATCCACCTCTACCACCTGCTCTGGTCTGCCACCAT
CCTCAACATTGTCGGCCTGTTCCTGGGCATCATCACTGCTGCGGTCCTCGGGGGCTTTAAGGAC
ATGAATCCTACTCTTCCAGCACTGAACTGTTCTGTTGACAATGCTCATCCTACTGTTTCTTACT
ACGCACGTCCTCAAGTGGCATCATACAATACCTACTACCATAGTCCTCCACACCTGCCACCCTA
TTCTGCTTATGACTTCCAGCATTCCAGCGTCTTTCCATCCTCCCCTCCCTCCGGACTTTCTGAC
GAGCCTCAGTCTGGCTCTCCCTCGCCCAGCTACATGTGGTCCTCGAGTGCACCACCCCGTTACT
CTCCACCCTACTATCCACCTTTTGAAAAGCCACCACCTTACAGTCCCTAAAGGAGTGAATACCC
CCTGGCTATTGAGATTATTGTGGCTTTTGTATTTCTGCTTTAGTGGAAGTATGTGAGGTATAAA
ATTTAAAATGTGACTCAATGCATAAAGTTTTACAACAGCCTGCCAGGCTAGGGAAAGATAGGGA
TGAAGGCTGTTACAGTTTGAAGGAAGGATGACTAGGCAGAGCCCAGCACTTCCAAGAAGAGCTC
AACTCTCTAAGCAGGGCTGGGGAGTCAGCCCAGCGAGAAGACTGTCATGTTTGAACTTGCATTA
CCTGTGCTCCACTTCCGTATCGAGCAAGCGTCACTGACATCTGTCTCACTTTATGTAAAGGAGT
GTTGTCCTCAGGCCCATGGCAGATTGCCACTCTAGCACCTTGGTTAAAGTACATGGCTTACAAG
GCCCTATCTTTCCCTACTAATGTTCAGTCCGTAAGGAAAATTTCCCAGATGATGGTTCCAGTAC
AGGGAGTTCTGGCTAAGATTTTGTTTGCTTTTCATCTGGATATAGAAAACAGCTGCCTATATCT
TACTCTTTTTCTGTGAGTATTGTAAAAATGGCTGTTGTGATCATTCAGCTCAGCTTTTGTTACT
GGTACCTCCTAAAGGGAAAAGTGCAATATTCTCTCATCTTTAGAGGGAAACAGGATTGTTCCAG
AAGCATTGAAATACAGAGCAGCCTGTGAGCTGTTTTAAGTAGATCTGTTATACATCTGACAATT
TAAGAGACTGAGGTTCTATTATATATTGTGTCATTACGAAATGCATTTACTGCAGGAGATATCT
TACCATTGGAAATGAGTTTAAAGACCCTAGATTAAGTTGGGTTGTGATATGAATTGTTACTAAT
CTTTGTGACTATTTAATCTTTAAATATTGTGCTTCAATCCCAGCAAACTGCACGTATCCTGCGC
CTCACCCCAAAAGAAACATGTATTTTAATGCCACTGCTCTTATTGGTCCTTTTTTTCTCTTGAG
ACCAATCATGATAGCATTAATTCAAGATTATGAAAGTGTTACAATGCCTCAAGTCTGTAAAATC
TCCACCTGTAGCTAACTTGACAAATTTCTAAGTGTCACGGTAGATTTAAAATCCATCTGACATT
GTGGAATTCATAGTTATTTTAATTACACATAGCTTTAAATCATCACCCAAATGAGTTTAGAACA
CTTTGGAATCCAGGCCTCTAATTTAGAATCAACACTTTCATTGAGCTTTTATGCTAACCTGTGA
ACTGGTTTAAAAGGAAGACTGATAATCCTACACTTGTCAATATAAAAATGCACAGGCTACAGAA
GGGTACCTAATCAGATAGTTCTGCAAATGCAGAACACATACTGGAAGATTTTCCAGCCAATTTT
GCTACCTCCCAACTTGATGAATTAGAGGTAGCAGACAAATGCTGGTGCTCCCATCTAGACACCT
TCCCATTAAGAATCATCAAGGCACAACAGGTGCACTCATTGTTTGCAGTAAATGTTTGCAAAAT
ATTGTTTAACTTTCAGCATCATGAATCTTGTCTCATACGGATTCCAGATCTGAAGTACTATAAC
CCTTTTGTGTTATACAAAATTATTATTTTTACAGTTCTGAGAATATTAAAATTCTACTGGGTAT
CAAAAAGGGACTAAGAACAATTGACTTACTATACAAATATCAACTTGTAATAATGAGTATTTTT
TTGCCATTTACACTTTACCTTTTGCTTTAGTAAATGTGTATTTTTAAGGGTACCGTTATACACT
ATAGCCTACATTTACCACATTTCTTAAAGTGTGAAGATTCTGACTCATTTCTATGTATTTTTCT
TATTTACAAAATAACTTGAAACAGATTTTGTAACACTTAATTTAAGCAGCTTTTTTTATTACAT
TGAATTATATAAAGTCCATGTTACCTTAAAAAATTAGTATTTGCTGCTTTACTCTTTTGCAAAA
CATTTGCTGTAATGAAGGAATTTGTATTTCCAATATATATCTCAACTGCATTTTGTAATTTATG
GCTTTAATCCTAATTCTGCTTTACAGTATTGAACTGGGCATGAAACATTAAACTATTAATCCAG
AACCTATGTAAACTGGATGTTGCTTAAAATCTGTATCACTGCCATGGTGGGAACCCAGACCGCT
TTTGTGATGTTTCAAATTAATAAAACTATCCTCCTTATCCACTTA

hide sequence

RefSeq Acc Id:

XM_005413667 ⟹ XP_005413724

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955572	1,574,785 - 1,628,025 (+)	NCBI

Sequence:

show sequence

CTCCGGGAGGAGAGGGAGGCAGAAGAGGAGGGAGGGAGAAGAGGGGAAGGGAGGGGGAGGCGGC
ACTTGGTCTGCAGCTCTCTACCAGAGGCAGTCTCTCTCAGCTCTCGGAGAGACCGGGAGAGGCT
GCCGTGGAGTAGGATGGTCTGCCAGGCTCCTTGAGTCAGGGGCGCCTAGAGCAGCTTCGTGGAC
TGGGGAGACCGGGCAGCTTTCACCATGCATCAGTCCCTGACTCAGCAGCGGTCCAGCGACATGT
CCCTGCCCGATTCTATGGGAGCCTTCAATCGGAGGAAACGAAATTCCATCTATGTCACCGTGAC
TTTGCTTATTGTGTCCATGTTAATTCTCACCGTGGGCCTTGCTGCAACCACCAGGACCCAGAAT
GTGACTGTTGGAGGTTATTACCCAGGAGTTATTCTCGGCTTTGGATCGTTCCTTGGAATCATTG
GATCAAACCTTGTTGAGAACAAGCGGCAGATGCTGGTGGCTTCAATTGTGTTTATCAGCTTTGG
TGTGATTGCAGCTTTCTGTTGTGCCATAGTTGATGGGGTCTTTGCTGCCAGACACATCGATCTG
AAACCACTCTATGCTAACCGGTGCCACTATGTCCCCAAAACATCCCAGAAGGAGGCTGAAGAGG
TCATAAGTTCCTCAACCAAAAATTCTCCTTCCGCGAGGGTTATGAGGAACCTTACCCAGACAGC
TAGAGAGGTGAACTGCCCTCACCTCAGCCGTGGGTTCTGCACTCCTCGCATCCGGGGTAACACC
TGCTTCTGCTGTGACCTCTACAACTGTGGCAAGGTGGAGATCACCGGTGGCTACTATGAGTACA
TCGATGTCAGCAGCTGCCAGGACATCATCCACCTCTACCACCTGCTCTGGTCTGCCACCATCCT
CAACATTGTCGGCCTGTTCCTGGGCATCATCACTGCTGCGGTCCTCGGGGGCTTTAAGGACATG
AATCCTACTCTTCCAGCACTGAACTGTTCTGTTGACAATGCTCATCCTACTGTTTCTTACTACG
CACGTCCTCAAGTGGCATCATACAATACCTACTACCATAGTCCTCCACACCTGCCACCCTATTC
TGCTTATGACTTCCAGCATTCCAGCGTCTTTCCATCCTCCCCTCCCTCCGGACTTTCTGACGAG
CCTCAGTCTGGCTCTCCCTCGCCCAGCTACATGTGGTCCTCGAGTGCACCACCCCGTTACTCTC
CACCCTACTATCCACCTTTTGAAAAGCCACCACCTTACAGTCCCTAAAGGAGTGAATACCCCCT
GGCTATTGAGATTATTGTGGCTTTTGTATTTCTGCTTTAGTGGAAGTATGTGAGGTATAAAATT
TAAAATGTGACTCAATGCATAAAGTTTTACAACAGCCTGCCAGGCTAGGGAAAGATAGGGATGA
AGGCTGTTACAGTTTGAAGGAAGGATGACTAGGCAGAGCCCAGCACTTCCAAGAAGAGCTCAAC
TCTCTAAGCAGGGCTGGGGAGTCAGCCCAGCGAGAAGACTGTCATGTTTGAACTTGCATTACCT
GTGCTCCACTTCCGTATCGAGCAAGCGTCACTGACATCTGTCTCACTTTATGTAAAGGAGTGTT
GTCCTCAGGCCCATGGCAGATTGCCACTCTAGCACCTTGGTTAAAGTACATGGCTTACAAGGCC
CTATCTTTCCCTACTAATGTTCAGTCCGTAAGGAAAATTTCCCAGATGATGGTTCCAGTACAGG
GAGTTCTGGCTAAGATTTTGTTTGCTTTTCATCTGGATATAGAAAACAGCTGCCTATATCTTAC
TCTTTTTCTGTGAGTATTGTAAAAATGGCTGTTGTGATCATTCAGCTCAGCTTTTGTTACTGGT
ACCTCCTAAAGGGAAAAGTGCAATATTCTCTCATCTTTAGAGGGAAACAGGATTGTTCCAGAAG
CATTGAAATACAGAGCAGCCTGTGAGCTGTTTTAAGTAGATCTGTTATACATCTGACAATTTAA
GAGACTGAGGTTCTATTATATATTGTGTCATTACGAAATGCATTTACTGCAGGAGATATCTTAC
CATTGGAAATGAGTTTAAAGACCCTAGATTAAGTTGGGTTGTGATATGAATTGTTACTAATCTT
TGTGACTATTTAATCTTTAAATATTGTGCTTCAATCCCAGCAAACTGCACGTATCCTGCGCCTC
ACCCCAAAAGAAACATGTATTTTAATGCCACTGCTCTTATTGGTCCTTTTTTTCTCTTGAGACC
AATCATGATAGCATTAATTCAAGATTATGAAAGTGTTACAATGCCTCAAGTCTGTAAAATCTCC
ACCTGTAGCTAACTTGACAAATTTCTAAGTGTCACGGTAGATTTAAAATCCATCTGACATTGTG
GAATTCATAGTTATTTTAATTACACATAGCTTTAAATCATCACCCAAATGAGTTTAGAACACTT
TGGAATCCAGGCCTCTAATTTAGAATCAACACTTTCATTGAGCTTTTATGCTAACCTGTGAACT
GGTTTAAAAGGAAGACTGATAATCCTACACTTGTCAATATAAAAATGCACAGGCTACAGAAGGG
TACCTAATCAGATAGTTCTGCAAATGCAGAACACATACTGGAAGATTTTCCAGCCAATTTTGCT
ACCTCCCAACTTGATGAATTAGAGGTAGCAGACAAATGCTGGTGCTCCCATCTAGACACCTTCC
CATTAAGAATCATCAAGGCACAACAGGTGCACTCATTGTTTGCAGTAAATGTTTGCAAAATATT
GTTTAACTTTCAGCATCATGAATCTTGTCTCATACGGATTCCAGATCTGAAGTACTATAACCCT
TTTGTGTTATACAAAATTATTATTTTTACAGTTCTGAGAATATTAAAATTCTACTGGGTATCAA
AAAGGGACTAAGAACAATTGACTTACTATACAAATATCAACTTGTAATAATGAGTATTTTTTTG
CCATTTACACTTTACCTTTTGCTTTAGTAAATGTGTATTTTTAAGGGTACCGTTATACACTATA
GCCTACATTTACCACATTTCTTAAAGTGTGAAGATTCTGACTCATTTCTATGTATTTTTCTTAT
TTACAAAATAACTTGAAACAGATTTTGTAACACTTAATTTAAGCAGCTTTTTTTATTACATTGA
ATTATATAAAGTCCATGTTACCTTAAAAAATTAGTATTTGCTGCTTTACTCTTTTGCAAAACAT
TTGCTGTAATGAAGGAATTTGTATTTCCAATATATATCTCAACTGCATTTTGTAATTTATGGCT
TTAATCCTAATTCTGCTTTACAGTATTGAACTGGGCATGAAACATTAAACTATTAATCCAGAAC
CTATGTAAACTGGATGTTGCTTAAAATCTGTATCACTGCCATGGTGGGAACCCAGACCGCTTTT
GTGATGTTTCAAATTAATAAAACTATCCTCCTTATCCACTTA

hide sequence

RefSeq Acc Id:

XM_005413668 ⟹ XP_005413725

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955572	1,574,785 - 1,628,025 (+)	NCBI

Sequence:

show sequence

CTCCGGGAGGAGAGGGAGGCAGAAGAGGAGGGAGGGAGAAGAGGGGAAGGGAGGGGGAGGCGGC
ACTTGGTCTGCAGCTCTCTACCAGAGGCAGTCTCTCTCAGCTCTCGGAGAGACCGGGAGAGGCT
GCCGTGGAGTAGGATGGTCTGCCAGGCTCCTTGAGTCAGGGGCGCCTAGAGCAGCTTCGTGGAC
TGGGGAGACCGGGCAGCTTTCACCATGCATCAGTCCCTGACTCAGCAGCGGTCCAGCGACATGT
CCCTGCCCGATTCTATGGGAGCCTTCAATCGGAGGAAACGAAATTCCATCTATGTCACCGTGAC
TTTGCTTATTGTGTCCATGTTAATTCTCACCGTGGGCCTTGCTGCAACCACCAGGACCCAGAAT
GTGACTGTTGGAGGTTATTACCCAGGAGTTATTCTCGGCTTTGGATCGTTCCTTGGAATCATTG
GATCAAACCTTGTTGAGAACAAGCGGCAGATGCTGGTGGCTTCAATTGTGTTTATCAGCTTTGG
TGTGATTGCAGCTTTCTGTTGTGCCATAGTTGATGGGGTCTTTGCTGCCAGACACATCGATCTG
AAACCACTCTATGCTAACCGGTGCCACTATGTCCCCAAAACATCCCAGAAGGAGGCTGAAGAGG
TGAACTGCCCTCACCTCAGCCGTGGGTTCTGCACTCCTCGCATCCGGGGTAACACCTGCTTCTG
CTGTGACCTCTACAACTGTGGCAACAGGGTGGAGATCACCGGTGGCTACTATGAGTACATCGAT
GTCAGCAGCTGCCAGGACATCATCCACCTCTACCACCTGCTCTGGTCTGCCACCATCCTCAACA
TTGTCGGCCTGTTCCTGGGCATCATCACTGCTGCGGTCCTCGGGGGCTTTAAGGACATGAATCC
TACTCTTCCAGCACTGAACTGTTCTGTTGACAATGCTCATCCTACTGTTTCTTACTACGCACGT
CCTCAAGTGGCATCATACAATACCTACTACCATAGTCCTCCACACCTGCCACCCTATTCTGCTT
ATGACTTCCAGCATTCCAGCGTCTTTCCATCCTCCCCTCCCTCCGGACTTTCTGACGAGCCTCA
GTCTGGCTCTCCCTCGCCCAGCTACATGTGGTCCTCGAGTGCACCACCCCGTTACTCTCCACCC
TACTATCCACCTTTTGAAAAGCCACCACCTTACAGTCCCTAAAGGAGTGAATACCCCCTGGCTA
TTGAGATTATTGTGGCTTTTGTATTTCTGCTTTAGTGGAAGTATGTGAGGTATAAAATTTAAAA
TGTGACTCAATGCATAAAGTTTTACAACAGCCTGCCAGGCTAGGGAAAGATAGGGATGAAGGCT
GTTACAGTTTGAAGGAAGGATGACTAGGCAGAGCCCAGCACTTCCAAGAAGAGCTCAACTCTCT
AAGCAGGGCTGGGGAGTCAGCCCAGCGAGAAGACTGTCATGTTTGAACTTGCATTACCTGTGCT
CCACTTCCGTATCGAGCAAGCGTCACTGACATCTGTCTCACTTTATGTAAAGGAGTGTTGTCCT
CAGGCCCATGGCAGATTGCCACTCTAGCACCTTGGTTAAAGTACATGGCTTACAAGGCCCTATC
TTTCCCTACTAATGTTCAGTCCGTAAGGAAAATTTCCCAGATGATGGTTCCAGTACAGGGAGTT
CTGGCTAAGATTTTGTTTGCTTTTCATCTGGATATAGAAAACAGCTGCCTATATCTTACTCTTT
TTCTGTGAGTATTGTAAAAATGGCTGTTGTGATCATTCAGCTCAGCTTTTGTTACTGGTACCTC
CTAAAGGGAAAAGTGCAATATTCTCTCATCTTTAGAGGGAAACAGGATTGTTCCAGAAGCATTG
AAATACAGAGCAGCCTGTGAGCTGTTTTAAGTAGATCTGTTATACATCTGACAATTTAAGAGAC
TGAGGTTCTATTATATATTGTGTCATTACGAAATGCATTTACTGCAGGAGATATCTTACCATTG
GAAATGAGTTTAAAGACCCTAGATTAAGTTGGGTTGTGATATGAATTGTTACTAATCTTTGTGA
CTATTTAATCTTTAAATATTGTGCTTCAATCCCAGCAAACTGCACGTATCCTGCGCCTCACCCC
AAAAGAAACATGTATTTTAATGCCACTGCTCTTATTGGTCCTTTTTTTCTCTTGAGACCAATCA
TGATAGCATTAATTCAAGATTATGAAAGTGTTACAATGCCTCAAGTCTGTAAAATCTCCACCTG
TAGCTAACTTGACAAATTTCTAAGTGTCACGGTAGATTTAAAATCCATCTGACATTGTGGAATT
CATAGTTATTTTAATTACACATAGCTTTAAATCATCACCCAAATGAGTTTAGAACACTTTGGAA
TCCAGGCCTCTAATTTAGAATCAACACTTTCATTGAGCTTTTATGCTAACCTGTGAACTGGTTT
AAAAGGAAGACTGATAATCCTACACTTGTCAATATAAAAATGCACAGGCTACAGAAGGGTACCT
AATCAGATAGTTCTGCAAATGCAGAACACATACTGGAAGATTTTCCAGCCAATTTTGCTACCTC
CCAACTTGATGAATTAGAGGTAGCAGACAAATGCTGGTGCTCCCATCTAGACACCTTCCCATTA
AGAATCATCAAGGCACAACAGGTGCACTCATTGTTTGCAGTAAATGTTTGCAAAATATTGTTTA
ACTTTCAGCATCATGAATCTTGTCTCATACGGATTCCAGATCTGAAGTACTATAACCCTTTTGT
GTTATACAAAATTATTATTTTTACAGTTCTGAGAATATTAAAATTCTACTGGGTATCAAAAAGG
GACTAAGAACAATTGACTTACTATACAAATATCAACTTGTAATAATGAGTATTTTTTTGCCATT
TACACTTTACCTTTTGCTTTAGTAAATGTGTATTTTTAAGGGTACCGTTATACACTATAGCCTA
CATTTACCACATTTCTTAAAGTGTGAAGATTCTGACTCATTTCTATGTATTTTTCTTATTTACA
AAATAACTTGAAACAGATTTTGTAACACTTAATTTAAGCAGCTTTTTTTATTACATTGAATTAT
ATAAAGTCCATGTTACCTTAAAAAATTAGTATTTGCTGCTTTACTCTTTTGCAAAACATTTGCT
GTAATGAAGGAATTTGTATTTCCAATATATATCTCAACTGCATTTTGTAATTTATGGCTTTAAT
CCTAATTCTGCTTTACAGTATTGAACTGGGCATGAAACATTAAACTATTAATCCAGAACCTATG
TAAACTGGATGTTGCTTAAAATCTGTATCACTGCCATGGTGGGAACCCAGACCGCTTTTGTGAT
GTTTCAAATTAATAAAACTATCCTCCTTATCCACTTA

hide sequence

RefSeq Acc Id:

XM_013509442 ⟹ XP_013364896

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955572	1,574,785 - 1,628,770 (+)	NCBI

Sequence:

show sequence

CTCCGGGAGGAGAGGGAGGCAGAAGAGGAGGGAGGGAGAAGAGGGGAAGGGAGGGGGAGGCGGC
ACTTGGTCTGCAGCTCTCTACCAGAGGCAGTCTCTCTCAGCTCTCGGAGAGACCGGGAGAGGCT
GCCGTGGAGTAGGATGGTCTGCCAGGCTCCTTGAGTCAGGGGCGCCTAGAGCAGCTTCGTGGAC
TGGGGAGACCGGGCAGCTTTCACCATGCATCAGTCCCTGACTCAGCAGCGGTCCAGCGACATGT
CCCTGCCCGATTCTATGGGAGCCTTCAATCGGAGGAAACGAAATTCCATCTATGTCACCGTGAC
TTTGCTTATTGTGTCCATGTTAATTCTCACCGTGGGCCTTGCTGCAACCACCAGGACCCAGAAT
GTGACTGTTGGAGGTTATTACCCAGGAGTTATTCTCGGCTTTGGATCGTTCCTTGGAATCATTG
GATCAAACCTTGTTGAGAACAAGCGGCAGATGCTGGTGGCTTCAATTGTGTTTATCAGCTTTGG
TGTGATTGCAGCTTTCTGTTGTGCCATAGTTGATGGGGTCTTTGCTGCCAGACACATCGATCTG
AAACCACTCTATGCTAACCGGTGCCACTATGTCCCCAAAACATCCCAGAAGGAGGCTGAAGAGG
TCATAAGTTCCTCAACCAAAAATTCTCCTTCCGCGAGGGTTATGAGGAACCTTACCCAGACAGC
TAGAGAGGTGAACTGCCCTCACCTCAGCCGTGGGTTCTGCACTCCTCGCATCCGGGGTAACACC
TGCTTCTGCTGTGACCTCTACAACTGTGGCAACAGGGTGGAGATCACCGGTGGCTACTATGAGT
ACATCGATGTCAGCAGCTGCCAGGACATCATCCACCTCTACCACCTGCTCTGGTCTGCCACCAT
CCTCAACATTGTCGGCCTGTTCCTGGGCATCATCACTGCTGCGGTCCTCGGGGGCTTTAAGGAC
ATGAATCCTACTCTTCCAGCACTGAACTGTTCTGTTGACAATGCTCATCCTACTGTTTCTTACT
ACGCACGTCCTCAAGTGGCATCATACAATACCTACTACCATAGTCCTCCACACCTGCCACCCTA
TTCTGCTTATGACTTCCAGGAGTCCTCATGGTATTTACCAAAGCATACCAAGACCACTAAAGCA
ACTGACAGCATTTATCTCATTTTGATTCAAGAAACAATGGGACATGACTAACCAACATATAACA
CCTACAGGAAAATTCTGGCAGGCTGTCATCAGAAATAAGCTCTAGTCCCTCTTTACAAAACTGA
AAACAACACAAAAGCCTGTGTAATTCCTGAAAGACAATCATGTAAAAAATGTACTCAACAATTA
GAATTAAATCATTTTATTTTTGTCATAAGAAGCTTTATGAATACCACATAATGATTACTGAAAA
GTAGAACTTAAAGTCATGACAAATAAAATTGTACAAGTATGAACAATACTGTATTGGGAGGAAA
AGAACAAGGGTTCATATGAATGATAGAAGTGAGGAAGCCAGTACTGTTAATATTTAATTTTTTA
GAATATGTATGCCCGACAATATAAAATACCTTTAGCAATGTTTACTGTTTTATCTTTTTGGTAC
AATGGGAAAATATGACATCATTTCCTCATAGTGGGTGTATGAGGGAGGAATCATTACCACCAAA
AAGATAATCACTGAAAATACTTTCTAAAATCTTCCAAGACTGCTACAGCATTTTAAAAGCTTTG
CCTGGTTTGAATATTTTTGTTATTTCTTTGAACAAATTTACTATTTCAAATAATTCCTGTCTAG
CACATTTATGGGTAACTTAGCATTACAGCAAATTTGAAGTCAACCTGAAAGAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005413723	(Get FASTA)	NCBI Sequence Viewer
	XP_005413724	(Get FASTA)	NCBI Sequence Viewer
	XP_005413725	(Get FASTA)	NCBI Sequence Viewer
	XP_013364896	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000000643
	ENSCLAP00000000643.1
	ENSCLAP00000000644
	ENSCLAP00000000644.1
	ENSCLAP00000000645
	ENSCLAP00000000645.1
	ENSCLAP00000000646.1

RefSeq Acc Id:	XP_005413723 ⟸ XM_005413666
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YI93 (UniProtKB/TrEMBL), A0A8C2YI96 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSMLILTVGLAATTRTQNVTVGGYYP GVILGFGSFLGIIGSNLVENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLKPLYANRC HYVPKTSQKEAEEVISSSTKNSPSARVMRNLTQTAREVNCPHLSRGFCTPRIRGNTCFCCDLYN CGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITAAVLGGFKDMNPTLPAL NCSVDNAHPTVSYYARPQVASYNTYYHSPPHLPPYSAYDFQHSSVFPSSPPSGLSDEPQSGSPS PSYMWSSSAPPRYSPPYYPPFEKPPPYSP hide sequence

RefSeq Acc Id:	XP_005413725 ⟸ XM_005413668
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2UGK3 (UniProtKB/TrEMBL), A0A8C2YI96 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSMLILTVGLAATTRTQNVTVGGYYP GVILGFGSFLGIIGSNLVENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLKPLYANRC HYVPKTSQKEAEEVNCPHLSRGFCTPRIRGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDII HLYHLLWSATILNIVGLFLGIITAAVLGGFKDMNPTLPALNCSVDNAHPTVSYYARPQVASYNT YYHSPPHLPPYSAYDFQHSSVFPSSPPSGLSDEPQSGSPSPSYMWSSSAPPRYSPPYYPPFEKP PPYSP hide sequence

RefSeq Acc Id:	XP_005413724 ⟸ XM_005413667
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2YI96 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSMLILTVGLAATTRTQNVTVGGYYP GVILGFGSFLGIIGSNLVENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLKPLYANRC HYVPKTSQKEAEEVISSSTKNSPSARVMRNLTQTAREVNCPHLSRGFCTPRIRGNTCFCCDLYN CGKVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITAAVLGGFKDMNPTLPALN CSVDNAHPTVSYYARPQVASYNTYYHSPPHLPPYSAYDFQHSSVFPSSPPSGLSDEPQSGSPSP SYMWSSSAPPRYSPPYYPPFEKPPPYSP hide sequence

RefSeq Acc Id:	XP_013364896 ⟸ XM_013509442
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C2UIT9 (UniProtKB/TrEMBL), A0A8C2YI96 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSMLILTVGLAATTRTQNVTVGGYYP GVILGFGSFLGIIGSNLVENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLKPLYANRC HYVPKTSQKEAEEVISSSTKNSPSARVMRNLTQTAREVNCPHLSRGFCTPRIRGNTCFCCDLYN CGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITAAVLGGFKDMNPTLPAL NCSVDNAHPTVSYYARPQVASYNTYYHSPPHLPPYSAYDFQESSWYLPKHTKTTKATDSIYLIL IQETMGHD hide sequence

RefSeq Acc Id:

ENSCLAP00000000644 ⟸ ENSCLAT00000000677

RefSeq Acc Id:

ENSCLAP00000000645 ⟸ ENSCLAT00000000678

RefSeq Acc Id:

ENSCLAP00000000646 ⟸ ENSCLAT00000000679

RefSeq Acc Id:

ENSCLAP00000000643 ⟸ ENSCLAT00000000676

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000000514	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000000676	ENTREZGENE
	ENSCLAT00000000676.1	UniProtKB/TrEMBL
	ENSCLAT00000000677	ENTREZGENE
	ENSCLAT00000000677.1	UniProtKB/TrEMBL
	ENSCLAT00000000678	ENTREZGENE
	ENSCLAT00000000678.1	UniProtKB/TrEMBL
	ENSCLAT00000000679.1	UniProtKB/TrEMBL
InterPro	TMEM255	UniProtKB/TrEMBL
NCBI Gene	Tmem255a	ENTREZGENE
PANTHER	PTHR33721	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 255A	UniProtKB/TrEMBL
Pfam	FAM70	UniProtKB/TrEMBL
UniProt	A0A8C2UGK3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2UIT9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YI93	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YI96	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar