Syt8 (synaptotagmin 8) - Rat Genome Database

Name: Syt8
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Syt8 (synaptotagmin 8) Chinchilla lanigera

Analyze

Symbol:

Syt8

Name:

synaptotagmin 8

RGD ID:

9030930

Description:

ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); clathrin binding (ortholog); INVOLVED IN acrosome reaction (ortholog); ASSOCIATED WITH delta beta-thalassemia (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

synaptotagmin VIII; synaptotagmin-8

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SYT8 (synaptotagmin 8)	NCBI	Ortholog
Mus musculus (house mouse):	Syt8 (synaptotagmin VIII)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Syt8 (synaptotagmin 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SYT8 (synaptotagmin 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SYT8 (synaptotagmin 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Syt8 (synaptotagmin 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SYT8 (synaptotagmin 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SYT8 (synaptotagmin 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Syt8 (synaptotagmin 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	13,642,780 - 13,648,262 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	13,642,933 - 13,648,351 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

delta beta-thalassemia (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

genetic disease (ISO)

immunodeficiency 39 (ISO)

neuronal ceroid lipofuscinosis (ISO)

Segawa Syndrome, Autosomal Recessive (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acrosome reaction (ISO)

Molecular Function

calcium-dependent phospholipid binding (ISO)

calcium-dependent protein binding (ISO)

clathrin binding (ISO)

syntaxin binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Syt8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	13,642,780 - 13,648,262 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	13,642,933 - 13,648,351 (+)	NCBI	ChiLan1.0	ChiLan1.0

SYT8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	1,831,784 - 1,837,521 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	1,828,307 - 1,837,521 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	1,855,657 - 1,858,751 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	1,812,250 - 1,815,326 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	1,812,281 - 1,815,326	NCBI
Celera	11	1,893,432 - 1,896,508 (+)	NCBI		Celera
Cytogenetic Map	11	p15.5	NCBI
HuRef	11	1,646,573 - 1,649,649 (+)	NCBI		HuRef
CHM1_1	11	1,854,481 - 1,857,557 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	1,917,579 - 1,923,320 (+)	NCBI		T2T-CHM13v2.0

Syt8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	141,988,195 - 141,994,136 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	141,988,587 - 141,994,133 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	142,434,850 - 142,440,396 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	142,434,850 - 142,440,396 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	149,620,882 - 149,626,303 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	142,244,367 - 142,249,788 (+)	NCBI		MGSCv36	mm8
Celera	7	142,190,658 - 142,196,079 (+)	NCBI		Celera
Cytogenetic Map	7	F5	NCBI
cM Map	7	87.93	NCBI

Syt8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	207,017,602 - 207,023,076 (+)	NCBI		GRCr8
mRatBN7.2	1	197,588,126 - 197,593,598 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	197,590,149 - 197,593,504 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	205,960,833 - 205,966,301 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	213,046,669 - 213,052,141 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	205,720,822 - 205,726,294 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	215,605,408 - 215,607,602 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	215,605,404 - 215,607,696 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	222,500,775 - 222,502,969 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	202,683,924 - 202,686,122 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	202,843,643 - 202,845,838 (+)	NCBI
Celera	1	195,210,125 - 195,212,319 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

SYT8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	4,256,510 - 4,258,846 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	3,463,692 - 3,470,264 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	1,867,572 - 1,874,115 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	1,899,325 - 1,905,764 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	1,902,554 - 1,910,084 (+)	Ensembl	panpan1.1		panPan2

SYT8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	46,069,380 - 46,075,477 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	46,072,495 - 46,075,480 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	44,676,051 - 44,685,670 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	46,752,813 - 46,756,815 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	46,753,883 - 46,756,729 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	46,194,603 - 46,204,217 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	45,774,910 - 45,784,524 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	46,521,011 - 46,530,630 (+)	NCBI		UU_Cfam_GSD_1.0

Syt8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	1,476,094 - 1,483,357 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936816	732,565 - 737,309 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936816	732,948 - 737,371 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SYT8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	1,247,878 - 1,250,437 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	1,245,988 - 1,250,422 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SYT8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	1,646,125 - 1,657,627 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	1,654,499 - 1,657,261 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	98,850,358 - 98,853,662 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Syt8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	14,731,508 - 14,733,893 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	14,673,307 - 14,733,984 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013514332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013514333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013514334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01022837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01220202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000024234 ⟹ ENSCLAP00000024004

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955422	13,642,780 - 13,648,262 (+)	Ensembl

RefSeq Acc Id:

XM_013514332 ⟹ XP_013369786

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955422	13,644,880 - 13,648,351 (+)	NCBI

Sequence:

show sequence

CCCTGCTGCTCCAGGAAAAGGGGAAGAGAAGGGTTGAACCTGAGAGCCTTCCCTGGGCCTAGGG
TCACCGTACAACCCAGCCCCCAGCCAGGAACCTGCCCTCCCTGCTCATGGATGGGAGGAGCCAG
CCTGGTCAGCAGGAAGATGGGTCGCCCACCAGATCCCCAGAGCGCCCCAACCCCAGCTGGCACC
ACGGCCATGCCTGAGCTCATTCCAGACCTCGTCTCCAAGATCCCCTGGCCCCACTGGGCATTCA
TTGTCGCTGCTCTTGGTGCCGGTATCCTCGCTGTTTCCTGTCTGTTCTGTGCCATCTGCTGCTG
CTGCCAACGCCGTCGTCGTCGTAGGAAGAAGCTCCAGGACAAGGAAGTTATGAGTCTGGGCAGT
GCCCGCAGCAGCACCACCACCCACCTGGTGCAACCAGATGTGGAGAACCTGGAGTCCAGCTTGG
GGGATCCTCGGCAGTGGGGGCGCATGCAGCTCTCCCTGGAGTACAACTTTGGAAGCCAGGAGAT
CAGGGTGGGTCTGAAGCAGGCGGCTGACCTCAGGGCGGAAGGCACGGCAGACCCCTATGCCCGT
GTCAGCGTGTCCACACAAGCTGGGCGCAGGCACGAGACAAAGGTGCATCATGGCACACTCTGCC
CCATGTTTGAGGAGACCTTCTCTTTCCACGTCCCACTGGCAGAGCTGCCCAGTGCCACCCTGCA
GGTGCAAGTGCTGGACTTCAATCGCTTCTCTGAGCACAAGCCACTGGGAGAGCTGTGCCTGCCA
CTGGGTACCCTGGATCCTCAGCACGTTGTGGAGTGCTGGTACCAGCTGGGCCCACCGGGCACCA
ATGAGGCTGAGCAGATGGGGGAGCTGTGCCTCTCACTGCGTTATGTGCCCAGCTCCGGCTATCT
GACCGTGGTTGTGCTAGAAGCCCGAGGCCTGAGCCCAGAGCTGGCAGAGTCCTATGTGAAGGTC
CAGCTCATGCTGAACCAGAAGAAGTGGAAGAAGAAGAAGACATCCAGCAAGAAGGGCACCACTG
CCCCCTACTTCAACGAAGCCTTCACCTTCCTGGTGCCCTTCAGCCAGGTCCAGAGTGTGGACCT
GGTATTGGCCATCTGGGCCCGTGGCCTGCAGCTCCGGGCCGAGCCTTTGGGCAAGGTGCTGCTA
GGCCCCCGGGCCTCCGGCCAGCCCCTGCAGCACTGGGCAGACATGCTGGCCCATGCCCGGCGGC
CCATCGCCCAGTGGCACCGCCTGCAGCCTGCCAAGGAGGTGGACCGCATCCTAGCCCTGCAGCC
CCGCCTGCGCCTGCCAGTGCCTCGCCCCTAAAAGCATCTTGGTCCTCAGTTTTCCCAGACAGAG
CCATAGGCACTCGTCTAGGCCACCTGTGGGACTCTAATAAAAGCCTTCCCCTGCCA

hide sequence

RefSeq Acc Id:

XM_013514333 ⟹ XP_013369787

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955422	13,642,933 - 13,648,351 (+)	NCBI

Sequence:

show sequence

GCTCCTAATCACTAGAGACAGAGCAAACGCCGGGCTCCAGCTGCAGGTTCTGAGTGGGACCGGC
CTCCTGGTGGCCAGAGCCTGAGAGGAAGGCCTGAGGCGGGCTGGCCATAGGAGCCGTGGCATCA
GCCAGCAGGAAGATGGGTCGCCCACCAGATCCCCAGAGCGCCCCAACCCCAGCTGGCACCACGG
CCATGCCTGAGCTCATTCCAGACCTCGTCTCCAAGATCCCCTGGCCCCACTGGGCATTCATTGT
CGCTGCTCTTGGTGCCGGTATCCTCGCTGTTTCCTGTCTGTTCTGTGCCATCTGCTGCTGCTGC
CAACGCCGTCGTCGTCGTAGGAAGAAGCTCCAGGACAAGGAAGTTATGAGTCTGGGCAGTGCCC
GCAGCAGCACCACCACCCACCTGGTGCAACCAGATGTGGAGAACCTGGAGTCCAGCTTGGGGGA
TCCTCGGCAGTGGGGGCGCATGCAGCTCTCCCTGGAGTACAACTTTGGAAGCCAGGAGATCAGG
GTGGGTCTGAAGCAGGCGGCTGACCTCAGGGCGGAAGGCACGGCAGACCCCTATGCCCGTGTCA
GCGTGTCCACACAAGCTGGGCGCAGGCACGAGACAAAGGTGCATCATGGCACACTCTGCCCCAT
GTTTGAGGAGACCTTCTCTTTCCACGTCCCACTGGCAGAGCTGCCCAGTGCCACCCTGCAGGTG
CAAGTGCTGGACTTCAATCGCTTCTCTGAGCACAAGCCACTGGGAGAGCTGTGCCTGCCACTGG
GTACCCTGGATCCTCAGCACGTTGTGGAGTGCTGGTACCAGCTGGGCCCACCGGGCACCAATGA
GGCTGAGCAGATGGGGGAGCTGTGCCTCTCACTGCGTTATGTGCCCAGCTCCGGCTATCTGACC
GTGGTTGTGCTAGAAGCCCGAGGCCTGAGCCCAGAGCTGGCAGAGTCCTATGTGAAGGTCCAGC
TCATGCTGAACCAGAAGAAGTGGAAGAAGAAGAAGACATCCAGCAAGAAGGGCACCACTGCCCC
CTACTTCAACGAAGCCTTCACCTTCCTGGTGCCCTTCAGCCAGGTCCAGAGTGTGGACCTGGTA
TTGGCCATCTGGGCCCGTGGCCTGCAGCTCCGGGCCGAGCCTTTGGGCAAGGTGCTGCTAGGCC
CCCGGGCCTCCGGCCAGCCCCTGCAGCACTGGGCAGACATGCTGGCCCATGCCCGGCGGCCCAT
CGCCCAGTGGCACCGCCTGCAGCCTGCCAAGGAGGTGGACCGCATCCTAGCCCTGCAGCCCCGC
CTGCGCCTGCCAGTGCCTCGCCCCTAAAAGCATCTTGGTCCTCAGTTTTCCCAGACAGAGCCAT
AGGCACTCGTCTAGGCCACCTGTGGGACTCTAATAAAAGCCTTCCCCTGCCA

hide sequence

RefSeq Acc Id:

XM_013514334 ⟹ XP_013369788

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955422	13,642,933 - 13,648,351 (+)	NCBI

Sequence:

show sequence

GCTCCTAATCACTAGAGACAGAGCAAACGCCGGGCTCCAGCTGCAGGTTCTGAGTGGGACCGGC
CTCCTGGTGGCCAGAGCCTGAGAGGAAGGCCTGAGGCGGGCTGGCCATAGGAGCCGTGGCATCA
GCAGGAAGATGGGTCGCCCACCAGATCCCCAGAGCGCCCCAACCCCAGCTGGCACCACGGCCAT
GCCTGAGCTCATTCCAGACCTCGTCTCCAAGATCCCCTGGCCCCACTGGGCATTCATTGTCGCT
GCTCTTGGTGCCGGTATCCTCGCTGTTTCCTGTCTGTTCTGTGCCATCTGCTGCTGCTGCCAAC
GCCGTCGTCGTCGTAGGAAGAAGCTCCAGGACAAGGAAGTTATGAGTCTGGGCAGTGCCCGCAG
CAGCACCACCACCCACCTGGTGCAACCAGATGTGGAGAACCTGGAGTCCAGCTTGGGGGATCCT
CGGCAGTGGGGGCGCATGCAGCTCTCCCTGGAGTACAACTTTGGAAGCCAGGAGATCAGGGTGG
GTCTGAAGCAGGCGGCTGACCTCAGGGCGGAAGGCACGGCAGACCCCTATGCCCGTGTCAGCGT
GTCCACACAAGCTGGGCGCAGGCACGAGACAAAGGTGCATCATGGCACACTCTGCCCCATGTTT
GAGGAGACCTTCTCTTTCCACGTCCCACTGGCAGAGCTGCCCAGTGCCACCCTGCAGGTGCAAG
TGCTGGACTTCAATCGCTTCTCTGAGCACAAGCCACTGGGAGAGCTGTGCCTGCCACTGGGTAC
CCTGGATCCTCAGCACGTTGTGGAGTGCTGGTACCAGCTGGGCCCACCGGGCACCAATGAGGCT
GAGCAGATGGGGGAGCTGTGCCTCTCACTGCGTTATGTGCCCAGCTCCGGCTATCTGACCGTGG
TTGTGCTAGAAGCCCGAGGCCTGAGCCCAGAGCTGGCAGAGTCCTATGTGAAGGTCCAGCTCAT
GCTGAACCAGAAGAAGTGGAAGAAGAAGAAGACATCCAGCAAGAAGGGCACCACTGCCCCCTAC
TTCAACGAAGCCTTCACCTTCCTGGTGCCCTTCAGCCAGGTCCAGAGTGTGGACCTGGTATTGG
CCATCTGGGCCCGTGGCCTGCAGCTCCGGGCCGAGCCTTTGGGCAAGGTGCTGCTAGGCCCCCG
GGCCTCCGGCCAGCCCCTGCAGCACTGGGCAGACATGCTGGCCCATGCCCGGCGGCCCATCGCC
CAGTGGCACCGCCTGCAGCCTGCCAAGGAGGTGGACCGCATCCTAGCCCTGCAGCCCCGCCTGC
GCCTGCCAGTGCCTCGCCCCTAAAAGCATCTTGGTCCTCAGTTTTCCCAGACAGAGCCATAGGC
ACTCGTCTAGGCCACCTGTGGGACTCTAATAAAAGCCTTCCCCTGCCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013369786	(Get FASTA)	NCBI Sequence Viewer
	XP_013369787	(Get FASTA)	NCBI Sequence Viewer
	XP_013369788	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000024004
	ENSCLAP00000024004.1

RefSeq Acc Id:	XP_013369787 ⟸ XM_013514333
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2W1Y7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGRPPDPQSAPTPAGTTAMPELIPDLVSKIPWPHWAFIVAALGAGILAVSCLFCAICCCCQRRR RRRKKLQDKEVMSLGSARSSTTTHLVQPDVENLESSLGDPRQWGRMQLSLEYNFGSQEIRVGLK QAADLRAEGTADPYARVSVSTQAGRRHETKVHHGTLCPMFEETFSFHVPLAELPSATLQVQVLD FNRFSEHKPLGELCLPLGTLDPQHVVECWYQLGPPGTNEAEQMGELCLSLRYVPSSGYLTVVVL EARGLSPELAESYVKVQLMLNQKKWKKKKTSSKKGTTAPYFNEAFTFLVPFSQVQSVDLVLAIW ARGLQLRAEPLGKVLLGPRASGQPLQHWADMLAHARRPIAQWHRLQPAKEVDRILALQPRLRLP VPRP hide sequence

RefSeq Acc Id:	XP_013369788 ⟸ XM_013514334
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2W1Y7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGRPPDPQSAPTPAGTTAMPELIPDLVSKIPWPHWAFIVAALGAGILAVSCLFCAICCCCQRRR RRRKKLQDKEVMSLGSARSSTTTHLVQPDVENLESSLGDPRQWGRMQLSLEYNFGSQEIRVGLK QAADLRAEGTADPYARVSVSTQAGRRHETKVHHGTLCPMFEETFSFHVPLAELPSATLQVQVLD FNRFSEHKPLGELCLPLGTLDPQHVVECWYQLGPPGTNEAEQMGELCLSLRYVPSSGYLTVVVL EARGLSPELAESYVKVQLMLNQKKWKKKKTSSKKGTTAPYFNEAFTFLVPFSQVQSVDLVLAIW ARGLQLRAEPLGKVLLGPRASGQPLQHWADMLAHARRPIAQWHRLQPAKEVDRILALQPRLRLP VPRP hide sequence

RefSeq Acc Id:

XP_013369786 ⟸ XM_013514332

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGGASLVSRKMGRPPDPQSAPTPAGTTAMPELIPDLVSKIPWPHWAFIVAALGAGILAVSCLFC
AICCCCQRRRRRRKKLQDKEVMSLGSARSSTTTHLVQPDVENLESSLGDPRQWGRMQLSLEYNF
GSQEIRVGLKQAADLRAEGTADPYARVSVSTQAGRRHETKVHHGTLCPMFEETFSFHVPLAELP
SATLQVQVLDFNRFSEHKPLGELCLPLGTLDPQHVVECWYQLGPPGTNEAEQMGELCLSLRYVP
SSGYLTVVVLEARGLSPELAESYVKVQLMLNQKKWKKKKTSSKKGTTAPYFNEAFTFLVPFSQV
QSVDLVLAIWARGLQLRAEPLGKVLLGPRASGQPLQHWADMLAHARRPIAQWHRLQPAKEVDRI
LALQPRLRLPVPRP

hide sequence

RefSeq Acc Id:

ENSCLAP00000024004 ⟸ ENSCLAT00000024234

Protein Domains

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000016479	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000024234	ENTREZGENE
	ENSCLAT00000024234.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.150	UniProtKB/TrEMBL
InterPro	C2_dom	UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/TrEMBL
	Synaptotagmin	UniProtKB/TrEMBL
NCBI Gene	Syt8	ENTREZGENE
PANTHER	PTHR10024:SF249	UniProtKB/TrEMBL
	SYNAPTOTAGMIN	UniProtKB/TrEMBL
Pfam	PF00168	UniProtKB/TrEMBL
PRINTS	SYNAPTOTAGMN	UniProtKB/TrEMBL
PROSITE	PS50004	UniProtKB/TrEMBL
SMART	SM00239	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49562	UniProtKB/TrEMBL
UniProt	A0A8C2W1Y7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Syt8	synaptotagmin 8		synaptotagmin VIII	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar