Papolg (poly(A) polymerase gamma)

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Gene: Papolg (poly(A) polymerase gamma) Chinchilla lanigera

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Symbol:

Papolg

Name:

poly(A) polymerase gamma

RGD ID:

9029170

Description:

ENCODES a protein that exhibits metal ion binding (ortholog); poly(A) RNA polymerase activity (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955424	23,003,107 - 23,034,412 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955424	23,005,942 - 23,034,360 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytosol (ISO)

nuclear body (ISO)

nucleoplasm (ISO)

nucleus (ISO)

Molecular Function

metal ion binding (ISO)

poly(A) RNA polymerase activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

3'-end pre-mRNA processing pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Papolg
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955424	23,003,107 - 23,034,412 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955424	23,005,942 - 23,034,360 (-)	NCBI	ChiLan1.0	ChiLan1.0

PAPOLG
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	60,756,268 - 60,802,086 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	60,756,253 - 60,802,086 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	60,983,403 - 61,029,221 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	60,836,887 - 60,879,602 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	60,895,033 - 60,937,747	NCBI
Celera	2	60,826,967 - 60,872,820 (+)	NCBI		Celera
Cytogenetic Map	2	p16.1	NCBI
HuRef	2	60,725,544 - 60,771,413 (+)	NCBI		HuRef
CHM1_1	2	60,913,785 - 60,959,664 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	60,762,056 - 60,807,916 (+)	NCBI		T2T-CHM13v2.0

Papolg
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	23,810,145 - 23,845,292 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	23,812,646 - 23,845,253 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	23,860,145 - 23,895,293 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	23,862,646 - 23,895,253 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	23,762,646 - 23,795,270 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	23,762,665 - 23,795,253 (-)	NCBI		MGSCv36	mm8
Celera	11	25,984,007 - 26,016,631 (-)	NCBI		Celera
Cytogenetic Map	11	A3.2	NCBI
cM Map	11	14.37	NCBI

Papolg
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	102,028,842 - 102,062,155 (-)	NCBI		GRCr8
mRatBN7.2	14	97,827,712 - 97,861,024 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	97,827,712 - 97,861,024 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	102,153,429 - 102,186,565 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	103,397,660 - 103,430,794 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	99,869,339 - 99,902,473 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	108,624,359 - 108,658,371 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	108,624,359 - 108,658,371 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	108,346,030 - 108,380,042 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	104,800,058 - 104,833,509 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	104,819,267 - 104,852,722 (-)	NCBI
Celera	14	96,796,350 - 96,827,229 (-)	NCBI		Celera
Cytogenetic Map	14	q22	NCBI

PAPOLG
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	65,571,229 - 65,622,291 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	65,583,940 - 65,626,242 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	60,846,593 - 60,892,462 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	61,988,572 - 62,030,291 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	61,988,572 - 62,030,291 (+)	Ensembl	panpan1.1		panPan2

PAPOLG
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	60,879,161 - 60,910,417 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	60,879,037 - 60,907,498 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	60,767,357 - 60,797,232 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	61,885,805 - 61,915,710 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	61,885,804 - 61,917,460 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	61,585,901 - 61,615,753 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	61,873,384 - 61,903,454 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	62,165,588 - 62,195,664 (+)	NCBI		UU_Cfam_GSD_1.0

Papolg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	22,250,508 - 22,286,097 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936491	6,285,206 - 6,322,668 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936491	6,285,209 - 6,320,646 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PAPOLG
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	80,986,402 - 81,025,293 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	80,986,395 - 81,025,369 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	85,081,488 - 85,116,907 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PAPOLG
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	46,193,350 - 46,237,078 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	46,189,698 - 46,237,059 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	65,563,753 - 65,610,061 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Papolg
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624833	1,133,462 - 1,159,684 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624833	1,134,200 - 1,163,341 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005385754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005385755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005385756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013514739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01024997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01024998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01030473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000012593 ⟹ ENSCLAP00000012448

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955424	23,003,107 - 23,034,412 (-)	Ensembl

RefSeq Acc Id:

XM_005385754 ⟹ XP_005385811

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955424	23,005,942 - 23,034,360 (-)	NCBI

Sequence:

show sequence

GGCTGGGAAGCGGCGCCATATTGGCGTCGGCCGCGCCGTATTGTCATAAATAGAGCCGGTTTTG
TGTTTTCACTACTCGGTTGGATGCCTCGGTCCTAGTAAGTGGGGGAGTGAGCGAGCCAGTGAGC
CACAACAAGCGACCAGAGGAAAGCAAACACAGGGCGAAGGGAAGCGCAGGAACAGGGAGGACTC
CCGAGTGAAAGACACTCGCCCGGAGGGAGGCGCAGGAAGCGATGAAAGAGATGTCTGCAAACAC
CATGCTGGACAGCCAGCATCAACAAAAACATTATGGAATTACCTCCCCAATTAGTTTAGCGTGT
CCCAAAGAAATTGACCATATTTACACACAGAAATTAATTGATGCCATGAAACCATTTGGAGTGT
TTGAAGATGAAGAAGAATTGAATCACAGGCTGGTTGTTCTTGGTAAATTGAACAATTTAGTAAA
AGAATGGATTTCTGATGTCAGTGAGAGCAAGAATCTTCCTCCTTCCGTTGTGGCTACTGTTGGT
GGTAAAATTTTCACATTTGGATCATACAGGCTTGGAGTACACACCAAGGGAGCTGACATTGATG
CACTTTGTGTAGCTCCTCGACATGTAGAGAGATCTGACTTCTTTCAGTCTTTCTTTGAAAAATT
GAAACACCAAGATGGCATTAGAAACTTAAGAGCTGTCGAAGATGCTTTTGTACCTGTTATAAAA
TTTGAATTTGATGGCATTGAGATTGATCTAGTCTTTGCAAGACTGGCAATACAAACCATATCAG
ATAATTTAGATCTAAGAGACGACTCTCGCCTGAGAAGCCTTGATATAAGATGTATTCGCAGTTT
AAATGGATGTAGAGTTACTGATGAAATTTTGCATTTAGTGCCAAATAAAGAAACTTTTAGACTC
ACCCTAAGAGCAGTGAAGTTATGGGCAAAACGACGTGGTATTTATTCCAACATGCTGGGATTTC
TTGGTGGTGTCTCCTGGGCAATGCTAGTTGCAAGAACTTGCCAACTATATCCAAATGCAGCAGC
TTCTACACTAGTTCATAAGTTTTTTTTAGTTTTTTCCAAGTGGGAGTGGCCAAATCCTGTGCTG
TTGAAACAACCAGAAGAAAGCAATTTGAATTTGCCTGTCTGGGACCCCCGGGTAAATCCATCAG
ATAGGTATCACCTCATGCCCATAATCACCCCAGCCTACCCACAGCAGAATTCTACATATAATGT
GTCCACATCCACTCGAACAGTAATGGTAGAAGAATTTAAACAAGGTCTTGCAGTTACTGATGAA
ATTCTTCAAGGGAAATCAGATTGGTCTAAATTACTTGAGCCACCAAATTTCTTTCAAAAGTACA
GACATTATATAGTATTGACTGCCAGTGCATCAACAGAAGAAAACCATCTAGAGTGGGTTGGATT
AGTAGAATCTAAAATCCGTGTACTTGTTGGAAACTTGGAACGGAATGAATTTATTACTCTTGCC
CATGTGAATCCCCAGTCATTCCCAGGAAATAAAGAACATCATAAAGACAACAATTACGTATCAA
TGTGGTTCCTTGGAATAATTTTTCGGAGAGTAGAAAATGCAGAAAGTGTTAATATAGACTTGAC
ATATGATATACAGTCATTTACTGATACAGTGTACAGACAGGCAAACAACATAAACATGCTGAAG
GAGGGAATGAAAATTGAAGCAACTCATGTAAAGAAAAAACAACTTCATCACTACCTTCCAGCAG
AGATTCTTCAAAAGAAGAAAAAGCAAAGTCTCTCTGATGTCAGTCGAAGTTCAGGCGGACTTCA
GTCTAAAAGATCGTCTCTGGATAGCAATTGTCTGGACAGCTCCAGAGACACAGACAGCGGAACG
CCTTTTCATTCCCCAGTGTCTGCAAACAAACCTTCTAAGCCTGAAAGTCCTCCTGCAGGAGAGA
CAGAAAGGAATAGTGCCGAGCCCGCGGCTGTAATTGCAGAGAAGCCACAGAGTGTCCCACCAGC
TCAAGGACTATCTATTCCAGTAATTGGTGCAAAGGTTGACTCTGCAGTAAAAGCTGTATCTCCC
CCAGCTGTGTGCACCATTCCTACTGTTGTAGGGCGAAATGTCATTCCTAGAATAACAAACCCCC
ACAACCCTACCCCGGGACAGCCACATCTAAATGGAATATCCAGTATGACCAAGAATGTTACACC
CAAAAGATCTCATTCCCCATCCATAGATGGGGCACCTAAAAGGTTGAAAGACATAGAAAAGTTT
ATTCGACTTGAGTCAGCATTTAAGGACTCCCGCACTGCTGAAGACAGAAAAAGAAAAACAATGG
ATGCCATTGGAGGAGAATCTATGCCTATTCCAACTATTGATACATCACGCAAAAAGAGACTGCC
CAGTAAAGAGCTACCAGATTCGTCTTCTCCGGTTCCAGCAAACAACATTCGTGTCATCAAAAAT
TCCATTCGACTCACCCTTAATCGGTAAAAGCAGTGCCTCCTCACTAAAGAGAACATGCAGTCAT
ACCATGGCATAGATGCCACCACTCTTCAGAATAGGAGTGGCTGTCACACATAAAATAGGTGAAG
TTACAGTCATCAGCCTAACAACCTTGAAATGGTTTCCGAACTCTCACACTCTGATCTGCAAATG
CTGTAGCATTCGCCCACAGATTGCTACATAACACTCCTGAGGATCACCTGCTATCAAATTGTCA
TCTACAGTATTATGGCTCTGCGTTGGGAGGTTTTACTGCCTTAACTTTAAGTGTTGCATTTCTC
TATTATGGGAACCGGTTCTTAGCCACTTGGACACTGACAGAACAAGTCTTGAACTTTTTTGTCT
ATGTGTATGAGTCTTACGTTGTAATTAATCATTGTATAGAGTTGAAAAAGTTGAAAACAAAAAA
AAATTGTCATGTAATTTTTCAAATGTTTATGTCTTTACTTTAGCATCAAAGTCACTTTGTAAAC
CCTGAGATAAATGAATGTGAGATATCTTTTCTGCTCTTTTCGTTTGTGTAGATGTACTGTCAGT
TCTATTGATTTAAATTATTTTTTTCCGGATTGGCACATGGAATATTTAAACTTTAATTTTTTGT
GCCTTTCTGTCCAAATGTTGTGTAACTACCAGGGAGGATTAGTCCAGTGATTCCATAAGAGTTG
GGCACCATAAATTCTCTATATTTTGCCTCCTATGGAGGCCTTTGAAATGCATCTTTATTAAAAA
ATCAAAATACAACCAGGATACTGAAAGTCAGTATATGAATGGTGAAATTATTGCATACCCTACC
GTCTCATGCCATTCTTGTTAGTTGGCTGGTATTTTTTACTGAGGAATAACTCATCCCACCATCA
CCAATAAGATACCTTTAGGTATGGGCAAACTTGTATTTTTGAGGTGTAAAATGAACTCGGCATG
GTAACCCCTGACCATAACCCCACAACTTCAAACAGGTTCTTCACAGACTAGGCATGCAGAAATA
GCCGTGGATTTTATTAAAACCTAAAGGCGTTTTTGAATGACATTGTTACCAACCATTAATTAAT
TGGCTCAGGACCTTTGTAATTTTTATTTAACAGTATGAGTTGTCTTTTTTACACTGCTGTTCTC
AGTGCATTTCTTAAGATTTTTTAAGTTCCATGGGCGCATGCTGAGTTTATTAAAATCCATAACC
ATGTAATTCTTGTAATATGTTGATTCAGTGTTTTGTAAATGAAGTCGTATGTATTTTCAGAGTA
TTTTTGTATGTACTGTAAGATACCATCTTTTCAAAGAGAAACCTTTAAAACCTTTA

hide sequence

RefSeq Acc Id:

XM_005385755 ⟹ XP_005385812

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955424	23,005,942 - 23,034,360 (-)	NCBI

Sequence:

show sequence

GGCTGGGAAGCGGCGCCATATTGGCGTCGGCCGCGCCGTATTGTCATAAATAGAGCCGGTTTTG
TGTTTTCACTACTCGGTTGGATGCCTCGGTCCTAAAACACCATGCTGGACAGCCAGCATCAACA
AAAACATTATGGAATTACCTCCCCAATTAGTTTAGCGTGTCCCAAAGAAATTGACCATATTTAC
ACACAGAAATTAATTGATGCCATGAAACCATTTGGAGTGTTTGAAGATGAAGAAGAATTGAATC
ACAGGCTGGTTGTTCTTGGTAAATTGAACAATTTAGTAAAAGAATGGATTTCTGATGTCAGTGA
GAGCAAGAATCTTCCTCCTTCCGTTGTGGCTACTGTTGGTGGTAAAATTTTCACATTTGGATCA
TACAGGCTTGGAGTACACACCAAGGGAGCTGACATTGATGCACTTTGTGTAGCTCCTCGACATG
TAGAGAGATCTGACTTCTTTCAGTCTTTCTTTGAAAAATTGAAACACCAAGATGGCATTAGAAA
CTTAAGAGCTGTCGAAGATGCTTTTGTACCTGTTATAAAATTTGAATTTGATGGCATTGAGATT
GATCTAGTCTTTGCAAGACTGGCAATACAAACCATATCAGATAATTTAGATCTAAGAGACGACT
CTCGCCTGAGAAGCCTTGATATAAGATGTATTCGCAGTTTAAATGGATGTAGAGTTACTGATGA
AATTTTGCATTTAGTGCCAAATAAAGAAACTTTTAGACTCACCCTAAGAGCAGTGAAGTTATGG
GCAAAACGACGTGGTATTTATTCCAACATGCTGGGATTTCTTGGTGGTGTCTCCTGGGCAATGC
TAGTTGCAAGAACTTGCCAACTATATCCAAATGCAGCAGCTTCTACACTAGTTCATAAGTTTTT
TTTAGTTTTTTCCAAGTGGGAGTGGCCAAATCCTGTGCTGTTGAAACAACCAGAAGAAAGCAAT
TTGAATTTGCCTGTCTGGGACCCCCGGGTAAATCCATCAGATAGGTATCACCTCATGCCCATAA
TCACCCCAGCCTACCCACAGCAGAATTCTACATATAATGTGTCCACATCCACTCGAACAGTAAT
GGTAGAAGAATTTAAACAAGGTCTTGCAGTTACTGATGAAATTCTTCAAGGGAAATCAGATTGG
TCTAAATTACTTGAGCCACCAAATTTCTTTCAAAAGTACAGACATTATATAGTATTGACTGCCA
GTGCATCAACAGAAGAAAACCATCTAGAGTGGGTTGGATTAGTAGAATCTAAAATCCGTGTACT
TGTTGGAAACTTGGAACGGAATGAATTTATTACTCTTGCCCATGTGAATCCCCAGTCATTCCCA
GGAAATAAAGAACATCATAAAGACAACAATTACGTATCAATGTGGTTCCTTGGAATAATTTTTC
GGAGAGTAGAAAATGCAGAAAGTGTTAATATAGACTTGACATATGATATACAGTCATTTACTGA
TACAGTGTACAGACAGGCAAACAACATAAACATGCTGAAGGAGGGAATGAAAATTGAAGCAACT
CATGTAAAGAAAAAACAACTTCATCACTACCTTCCAGCAGAGATTCTTCAAAAGAAGAAAAAGC
AAAGTCTCTCTGATGTCAGTCGAAGTTCAGGCGGACTTCAGTCTAAAAGATCGTCTCTGGATAG
CAATTGTCTGGACAGCTCCAGAGACACAGACAGCGGAACGCCTTTTCATTCCCCAGTGTCTGCA
AACAAACCTTCTAAGCCTGAAAGTCCTCCTGCAGGAGAGACAGAAAGGAATAGTGCCGAGCCCG
CGGCTGTAATTGCAGAGAAGCCACAGAGTGTCCCACCAGCTCAAGGACTATCTATTCCAGTAAT
TGGTGCAAAGGTTGACTCTGCAGTAAAAGCTGTATCTCCCCCAGCTGTGTGCACCATTCCTACT
GTTGTAGGGCGAAATGTCATTCCTAGAATAACAAACCCCCACAACCCTACCCCGGGACAGCCAC
ATCTAAATGGAATATCCAGTATGACCAAGAATGTTACACCCAAAAGATCTCATTCCCCATCCAT
AGATGGGGCACCTAAAAGGTTGAAAGACATAGAAAAGTTTATTCGACTTGAGTCAGCATTTAAG
GACTCCCGCACTGCTGAAGACAGAAAAAGAAAAACAATGGATGCCATTGGAGGAGAATCTATGC
CTATTCCAACTATTGATACATCACGCAAAAAGAGACTGCCCAGTAAAGAGCTACCAGATTCGTC
TTCTCCGGTTCCAGCAAACAACATTCGTGTCATCAAAAATTCCATTCGACTCACCCTTAATCGG
TAAAAGCAGTGCCTCCTCACTAAAGAGAACATGCAGTCATACCATGGCATAGATGCCACCACTC
TTCAGAATAGGAGTGGCTGTCACACATAAAATAGGTGAAGTTACAGTCATCAGCCTAACAACCT
TGAAATGGTTTCCGAACTCTCACACTCTGATCTGCAAATGCTGTAGCATTCGCCCACAGATTGC
TACATAACACTCCTGAGGATCACCTGCTATCAAATTGTCATCTACAGTATTATGGCTCTGCGTT
GGGAGGTTTTACTGCCTTAACTTTAAGTGTTGCATTTCTCTATTATGGGAACCGGTTCTTAGCC
ACTTGGACACTGACAGAACAAGTCTTGAACTTTTTTGTCTATGTGTATGAGTCTTACGTTGTAA
TTAATCATTGTATAGAGTTGAAAAAGTTGAAAACAAAAAAAAATTGTCATGTAATTTTTCAAAT
GTTTATGTCTTTACTTTAGCATCAAAGTCACTTTGTAAACCCTGAGATAAATGAATGTGAGATA
TCTTTTCTGCTCTTTTCGTTTGTGTAGATGTACTGTCAGTTCTATTGATTTAAATTATTTTTTT
CCGGATTGGCACATGGAATATTTAAACTTTAATTTTTTGTGCCTTTCTGTCCAAATGTTGTGTA
ACTACCAGGGAGGATTAGTCCAGTGATTCCATAAGAGTTGGGCACCATAAATTCTCTATATTTT
GCCTCCTATGGAGGCCTTTGAAATGCATCTTTATTAAAAAATCAAAATACAACCAGGATACTGA
AAGTCAGTATATGAATGGTGAAATTATTGCATACCCTACCGTCTCATGCCATTCTTGTTAGTTG
GCTGGTATTTTTTACTGAGGAATAACTCATCCCACCATCACCAATAAGATACCTTTAGGTATGG
GCAAACTTGTATTTTTGAGGTGTAAAATGAACTCGGCATGGTAACCCCTGACCATAACCCCACA
ACTTCAAACAGGTTCTTCACAGACTAGGCATGCAGAAATAGCCGTGGATTTTATTAAAACCTAA
AGGCGTTTTTGAATGACATTGTTACCAACCATTAATTAATTGGCTCAGGACCTTTGTAATTTTT
ATTTAACAGTATGAGTTGTCTTTTTTACACTGCTGTTCTCAGTGCATTTCTTAAGATTTTTTAA
GTTCCATGGGCGCATGCTGAGTTTATTAAAATCCATAACCATGTAATTCTTGTAATATGTTGAT
TCAGTGTTTTGTAAATGAAGTCGTATGTATTTTCAGAGTATTTTTGTATGTACTGTAAGATACC
ATCTTTTCAAAGAGAAACCTTTAAAACCTTTA

hide sequence

RefSeq Acc Id:

XM_005385756 ⟹ XP_005385813

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955424	23,005,942 - 23,034,360 (-)	NCBI

Sequence:

show sequence

GGCTGGGAAGCGGCGCCATATTGGCGTCGGCCGCGCCGTATTGTCATAAATAGAGCCGGTTTTG
TGTTTTCACTACTCGGTTGGATGCCTCGGTCCTAGTAAGTGGGGGAGTGAGCGAGCCAGTGAGC
CACAACAAGCGACCAGAGGAAAGCAAACACAGGGCGAAGGGAAGCGCAGGAACAGGGAGGACTC
CCGAGTGAAAGACACTCGCCCGGAGGGAGGCGCAGGAAGCGATGAAAGAGATGTCTGCGTAAGT
GGTGGGGGCGGCGGTTGAGGACGCGGCGGCGAGAAACACCATGCTGGACAGCCAGCATCAACAA
AAACATTATGGAATTACCTCCCCAATTAGTTTAGCGTGTCCCAAAGAAATTGACCATATTTACA
CACAGAAATTAATTGATGCCATGAAACCATTTGGAGTGTTTGAAGATGAAGAAGAATTGAATCA
CAGGCTGGTTGTTCTTGGTAAATTGAACAATTTAGTAAAAGAATGGATTTCTGATGTCAGTGAG
AGCAAGAATCTTCCTCCTTCCGTTGTGGCTACTGTTGGTGGTAAAATTTTCACATTTGGATCAT
ACAGGCTTGGAGTACACACCAAGGGAGCTGACATTGATGCACTTTGTGTAGCTCCTCGACATGT
AGAGAGATCTGACTTCTTTCAGTCTTTCTTTGAAAAATTGAAACACCAAGATGGCATTAGAAAC
TTAAGAGCTGTCGAAGATGCTTTTGTACCTGTTATAAAATTTGAATTTGATGGCATTGAGATTG
ATCTAGTCTTTGCAAGACTGGCAATACAAACCATATCAGATAATTTAGATCTAAGAGACGACTC
TCGCCTGAGAAGCCTTGATATAAGATGTATTCGCAGTTTAAATGGATGTAGAGTTACTGATGAA
ATTTTGCATTTAGTGCCAAATAAAGAAACTTTTAGACTCACCCTAAGAGCAGTGAAGTTATGGG
CAAAACGACGTGGTATTTATTCCAACATGCTGGGATTTCTTGGTGGTGTCTCCTGGGCAATGCT
AGTTGCAAGAACTTGCCAACTATATCCAAATGCAGCAGCTTCTACACTAGTTCATAAGTTTTTT
TTAGTTTTTTCCAAGTGGGAGTGGCCAAATCCTGTGCTGTTGAAACAACCAGAAGAAAGCAATT
TGAATTTGCCTGTCTGGGACCCCCGGGTAAATCCATCAGATAGGTATCACCTCATGCCCATAAT
CACCCCAGCCTACCCACAGCAGAATTCTACATATAATGTGTCCACATCCACTCGAACAGTAATG
GTAGAAGAATTTAAACAAGGTCTTGCAGTTACTGATGAAATTCTTCAAGGGAAATCAGATTGGT
CTAAATTACTTGAGCCACCAAATTTCTTTCAAAAGTACAGACATTATATAGTATTGACTGCCAG
TGCATCAACAGAAGAAAACCATCTAGAGTGGGTTGGATTAGTAGAATCTAAAATCCGTGTACTT
GTTGGAAACTTGGAACGGAATGAATTTATTACTCTTGCCCATGTGAATCCCCAGTCATTCCCAG
GAAATAAAGAACATCATAAAGACAACAATTACGTATCAATGTGGTTCCTTGGAATAATTTTTCG
GAGAGTAGAAAATGCAGAAAGTGTTAATATAGACTTGACATATGATATACAGTCATTTACTGAT
ACAGTGTACAGACAGGCAAACAACATAAACATGCTGAAGGAGGGAATGAAAATTGAAGCAACTC
ATGTAAAGAAAAAACAACTTCATCACTACCTTCCAGCAGAGATTCTTCAAAAGAAGAAAAAGCA
AAGTCTCTCTGATGTCAGTCGAAGTTCAGGCGGACTTCAGTCTAAAAGATCGTCTCTGGATAGC
AATTGTCTGGACAGCTCCAGAGACACAGACAGCGGAACGCCTTTTCATTCCCCAGTGTCTGCAA
ACAAACCTTCTAAGCCTGAAAGTCCTCCTGCAGGAGAGACAGAAAGGAATAGTGCCGAGCCCGC
GGCTGTAATTGCAGAGAAGCCACAGAGTGTCCCACCAGCTCAAGGACTATCTATTCCAGTAATT
GGTGCAAAGGTTGACTCTGCAGTAAAAGCTGTATCTCCCCCAGCTGTGTGCACCATTCCTACTG
TTGTAGGGCGAAATGTCATTCCTAGAATAACAAACCCCCACAACCCTACCCCGGGACAGCCACA
TCTAAATGGAATATCCAGTATGACCAAGAATGTTACACCCAAAAGATCTCATTCCCCATCCATA
GATGGGGCACCTAAAAGGTTGAAAGACATAGAAAAGTTTATTCGACTTGAGTCAGCATTTAAGG
ACTCCCGCACTGCTGAAGACAGAAAAAGAAAAACAATGGATGCCATTGGAGGAGAATCTATGCC
TATTCCAACTATTGATACATCACGCAAAAAGAGACTGCCCAGTAAAGAGCTACCAGATTCGTCT
TCTCCGGTTCCAGCAAACAACATTCGTGTCATCAAAAATTCCATTCGACTCACCCTTAATCGGT
AAAAGCAGTGCCTCCTCACTAAAGAGAACATGCAGTCATACCATGGCATAGATGCCACCACTCT
TCAGAATAGGAGTGGCTGTCACACATAAAATAGGTGAAGTTACAGTCATCAGCCTAACAACCTT
GAAATGGTTTCCGAACTCTCACACTCTGATCTGCAAATGCTGTAGCATTCGCCCACAGATTGCT
ACATAACACTCCTGAGGATCACCTGCTATCAAATTGTCATCTACAGTATTATGGCTCTGCGTTG
GGAGGTTTTACTGCCTTAACTTTAAGTGTTGCATTTCTCTATTATGGGAACCGGTTCTTAGCCA
CTTGGACACTGACAGAACAAGTCTTGAACTTTTTTGTCTATGTGTATGAGTCTTACGTTGTAAT
TAATCATTGTATAGAGTTGAAAAAGTTGAAAACAAAAAAAAATTGTCATGTAATTTTTCAAATG
TTTATGTCTTTACTTTAGCATCAAAGTCACTTTGTAAACCCTGAGATAAATGAATGTGAGATAT
CTTTTCTGCTCTTTTCGTTTGTGTAGATGTACTGTCAGTTCTATTGATTTAAATTATTTTTTTC
CGGATTGGCACATGGAATATTTAAACTTTAATTTTTTGTGCCTTTCTGTCCAAATGTTGTGTAA
CTACCAGGGAGGATTAGTCCAGTGATTCCATAAGAGTTGGGCACCATAAATTCTCTATATTTTG
CCTCCTATGGAGGCCTTTGAAATGCATCTTTATTAAAAAATCAAAATACAACCAGGATACTGAA
AGTCAGTATATGAATGGTGAAATTATTGCATACCCTACCGTCTCATGCCATTCTTGTTAGTTGG
CTGGTATTTTTTACTGAGGAATAACTCATCCCACCATCACCAATAAGATACCTTTAGGTATGGG
CAAACTTGTATTTTTGAGGTGTAAAATGAACTCGGCATGGTAACCCCTGACCATAACCCCACAA
CTTCAAACAGGTTCTTCACAGACTAGGCATGCAGAAATAGCCGTGGATTTTATTAAAACCTAAA
GGCGTTTTTGAATGACATTGTTACCAACCATTAATTAATTGGCTCAGGACCTTTGTAATTTTTA
TTTAACAGTATGAGTTGTCTTTTTTACACTGCTGTTCTCAGTGCATTTCTTAAGATTTTTTAAG
TTCCATGGGCGCATGCTGAGTTTATTAAAATCCATAACCATGTAATTCTTGTAATATGTTGATT
CAGTGTTTTGTAAATGAAGTCGTATGTATTTTCAGAGTATTTTTGTATGTACTGTAAGATACCA
TCTTTTCAAAGAGAAACCTTTAAAACCTTTA

hide sequence

RefSeq Acc Id:

XM_013514739 ⟹ XP_013370193

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955424	23,007,357 - 23,034,360 (-)	NCBI

Sequence:

show sequence

GGCTGGGAAGCGGCGCCATATTGGCGTCGGCCGCGCCGTATTGTCATAAATAGAGCCGGTTTTG
TGTTTTCACTACTCGGTTGGATGCCTCGGTCCTAGTAAGTGGGGGAGTGAGCGAGCCAGTGAGC
CACAACAAGCGACCAGAGGAAAGCAAACACAGGGCGAAGGGAAGCGCAGGAACAGGGAGGACTC
CCGAGTGAAAGACACTCGCCCGGAGGGAGGCGCAGGAAGCGATGAAAGAGATGTCTGCAAACAC
CATGCTGGACAGCCAGCATCAACAAAAACATTATGGAATTACCTCCCCAATTAGTTTAGCGTGT
CCCAAAGAAATTGACCATATTTACACACAGAAATTAATTGATGCCATGAAACCATTTGGAGTGT
TTGAAGATGAAGAAGAATTGAATCACAGGCTGGTTGTTCTTGGTAAATTGAACAATTTAGTAAA
AGAATGGATTTCTGATGTCAGTGAGAGCAAGAATCTTCCTCCTTCCGTTGTGGCTACTGTTGGT
GGTAAAATTTTCACATTTGGATCATACAGGCTTGGAGTACACACCAAGGGAGCTGACATTGATG
CACTTTGTGTAGCTCCTCGACATGTAGAGAGATCTGACTTCTTTCAGTCTTTCTTTGAAAAATT
GAAACACCAAGATGGCATTAGAAACTTAAGAGCTGTCGAAGATGCTTTTGTACCTGTTATAAAA
TTTGAATTTGATGGCATTGAGATTGATCTAGTCTTTGCAAGACTGGCAATACAAACCATATCAG
ATAATTTAGATCTAAGAGACGACTCTCGCCTGAGAAGCCTTGATATAAGATGTATTCGCAGTTT
AAATGGATGTAGAGTTACTGATGAAATTTTGCATTTAGTGCCAAATAAAGAAACTTTTAGACTC
ACCCTAAGAGCAGTGAAGTTATGGGCAAAACGACGTGGTATTTATTCCAACATGCTGGGATTTC
TTGGTGGTGTCTCCTGGGCAATGCTAGTTGCAAGAACTTGCCAACTATATCCAAATGCAGCAGC
TTCTACACTAGTTCATAAGTTTTTTTTAGTTTTTTCCAAGTGGGAGTGGCCAAATCCTGTGCTG
TTGAAACAACCAGAAGAAAGCAATTTGAATTTGCCTGTCTGGGACCCCCGGGTAAATCCATCAG
ATAGGTATCACCTCATGCCCATAATCACCCCAGCCTACCCACAGCAGAATTCTACATATAATGT
GTCCACATCCACTCGAACAGTAATGGTAGAAGAATTTAAACAAGGTCTTGCAGTTACTGATGAA
ATTCTTCAAGGGAAATCAGATTGGTCTAAATTACTTGAGCCACCAAATTTCTTTCAAAAGTACA
GACATTATATAGTATTGACTGCCAGTGCATCAACAGAAGAAAACCATCTAGAGTGGGTTGGATT
AGTAGAATCTAAAATCCGTGTACTTGTTGGAAACTTGGAACGGAATGAATTTATTACTCTTGCC
CATGTGAATCCCCAGTCATTCCCAGGAAATAAAGAACATCATAAAGACAACAATTACGTATCAA
TGTGGTTCCTTGGAATAATTTTTCGGAGAGTAGAAAATGCAGAAAGTGTTAATATAGACTTGAC
ATATGATATACAGTCATTTACTGATACAGTGTACAGACAGGCAAACAACATAAACATGCTGAAG
GAGGGAATGAAAATTGAAGCAACTCATGTAAAGAAAAAACAACTTCATCACTACCTTCCAGCAG
AGATTCTTCAAAAGAAGAAAAAGCAAAGTCTCTCTGATGTCAGTCGAAGTTCAGGCGGACTTCA
GTCTAAAAGATCGTCTCTGGATAGCAATTGTCTGGACAGCTCCAGAGACACAGACAGCGGAACG
CCTTTTCATTCCCCAGTGTCTGCAAACAAACCTTCTAAGCCTGAAAGTCCTCCTGCAGGAGAGA
CAGAAAGGAATAGTGCCGAGCCCGCGGCTGTAATTGCAGAGAAGCCACAGAGTGTCCCACCAGC
TCAAGGACTATCTATTCCAGTAATTGGTGCAAAGGTTGACTCTGCAGTAAAAGCTGTATCTCCC
CCAGCTGTGTGCACCATTCCTACTGTTGTAGGGCGAAATGTCATTCCTAGAATAACAAACCCCC
ACAACCCTACCCCGGGACAGCCACATCTAAATGGAATATCCAGTATGACCAAGAATGTTACACC
CAAAAGATCTCATTCCCCATCCATAGATGGGGCACCTAAAAGGTTGAAAGACATAGAAAAGTTT
ATTCGACTTGAGTCAGCATTTAAGGACTCCCGCACTGCTGAAGACAGAAAAAGAAAAACAATGG
ATGCCATTGGAGGAGAATCTATGCCTATTCCAACTATTGATACATCACGCAAAAAGGTGTTTCC
TGTGTAGTCACCGGCACTTCCTATTTTGTTGTCTGACTTCAAGGAGGACGGAGTTCGCTAGTCT
AGAAGTGGCAATTGATCCAACAAAGTCCTGTTGTCCTGTACACACGCAGTGACCTGCCACTTCA
AGCCTTTTCCCTGGCCTGTCTGTGTTTCCGTTCCGACCCCGCAAAGAAGTCCCCAGAGCAAGAA
ATCCCAGTGAACAGACAGCACTGGAAGGGATTCTTCACACTCACACTTGAGTGTTTAGGAGCTT
CGGGGATTTGGAGGAAGCGTAGGAGTTTTGACTTGGTTGTTCTGCCTGTGTGACATATACGTAC
GTGTCTCCTTGTTTGTTTTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005385811	(Get FASTA)	NCBI Sequence Viewer
	XP_005385812	(Get FASTA)	NCBI Sequence Viewer
	XP_005385813	(Get FASTA)	NCBI Sequence Viewer
	XP_013370193	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000012448
	ENSCLAP00000012448.1

RefSeq Acc Id:	XP_005385811 ⟸ XM_005385754
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VGQ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKEMSANTMLDSQHQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVL GKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDF FQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSL DIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTC QLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYP QQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEE NHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENA ESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDV SRSSGGLQSKRSSLDSNCLDSSRDTDSGTPFHSPVSANKPSKPESPPAGETERNSAEPAAVIAE KPQSVPPAQGLSIPVIGAKVDSAVKAVSPPAVCTIPTVVGRNVIPRITNPHNPTPGQPHLNGIS SMTKNVTPKRSHSPSIDGAPKRLKDIEKFIRLESAFKDSRTAEDRKRKTMDAIGGESMPIPTID TSRKKRLPSKELPDSSSPVPANNIRVIKNSIRLTLNR hide sequence

RefSeq Acc Id:

XP_005385812 ⟸ XM_005385755

- Peptide Label:

isoform X2

- Sequence:

show sequence

MLDSQHQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVK
EWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKL
KHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSL
NGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAA
STLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNV
STSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL
VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLT
YDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSSGGLQ
SKRSSLDSNCLDSSRDTDSGTPFHSPVSANKPSKPESPPAGETERNSAEPAAVIAEKPQSVPPA
QGLSIPVIGAKVDSAVKAVSPPAVCTIPTVVGRNVIPRITNPHNPTPGQPHLNGISSMTKNVTP
KRSHSPSIDGAPKRLKDIEKFIRLESAFKDSRTAEDRKRKTMDAIGGESMPIPTIDTSRKKRLP
SKELPDSSSPVPANNIRVIKNSIRLTLNR

hide sequence

RefSeq Acc Id:

XP_005385813 ⟸ XM_005385756

- Peptide Label:

isoform X2

- Sequence:

show sequence

MLDSQHQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVK
EWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEKL
KHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSL
NGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAA
STLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNV
STSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL
VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLT
YDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSSGGLQ
SKRSSLDSNCLDSSRDTDSGTPFHSPVSANKPSKPESPPAGETERNSAEPAAVIAEKPQSVPPA
QGLSIPVIGAKVDSAVKAVSPPAVCTIPTVVGRNVIPRITNPHNPTPGQPHLNGISSMTKNVTP
KRSHSPSIDGAPKRLKDIEKFIRLESAFKDSRTAEDRKRKTMDAIGGESMPIPTIDTSRKKRLP
SKELPDSSSPVPANNIRVIKNSIRLTLNR

hide sequence

RefSeq Acc Id:

XP_013370193 ⟸ XM_013514739

- Peptide Label:

isoform X3

- Sequence:

show sequence

MKEMSANTMLDSQHQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVL
GKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDF
FQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSL
DIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTC
QLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYP
QQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEE
NHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENA
ESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDV
SRSSGGLQSKRSSLDSNCLDSSRDTDSGTPFHSPVSANKPSKPESPPAGETERNSAEPAAVIAE
KPQSVPPAQGLSIPVIGAKVDSAVKAVSPPAVCTIPTVVGRNVIPRITNPHNPTPGQPHLNGIS
SMTKNVTPKRSHSPSIDGAPKRLKDIEKFIRLESAFKDSRTAEDRKRKTMDAIGGESMPIPTID
TSRKKVFPV

hide sequence

Ensembl Acc Id:

ENSCLAP00000012448 ⟸ ENSCLAT00000012593

Protein Domains

Poly(A) polymerase central Poly(A) polymerase nucleotidyltransferase Poly(A) polymerase RNA-binding

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000008603	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000012593	ENTREZGENE
	ENSCLAT00000012593.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1410.10	UniProtKB/TrEMBL
	3.30.460.10	UniProtKB/TrEMBL
	Poly(A) polymerase predicted RNA binding domain	UniProtKB/TrEMBL
InterPro	NT_sf	UniProtKB/TrEMBL
	NuclTrfase_I-like_C	UniProtKB/TrEMBL
	PolA_pol_cen_dom	UniProtKB/TrEMBL
	PolA_pol_NTPase	UniProtKB/TrEMBL
	PolA_pol_RNA-bd_dom	UniProtKB/TrEMBL
NCBI Gene	Papolg	ENTREZGENE
PANTHER	POLY A POLYMERASE	UniProtKB/TrEMBL
	POLY(A) POLYMERASE GAMMA	UniProtKB/TrEMBL
Pfam	PAP_central	UniProtKB/TrEMBL
	PAP_NTPase	UniProtKB/TrEMBL
	PAP_RNA-bind	UniProtKB/TrEMBL
PROSITE	PROKAR_LIPOPROTEIN	UniProtKB/TrEMBL
Superfamily-SCOP	PAP/OAS1 substrate-binding domain	UniProtKB/TrEMBL
	SSF55003	UniProtKB/TrEMBL
	SSF81301	UniProtKB/TrEMBL
UniProt	A0A8C2VGQ9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations