Foxk1 (forkhead box K1) - Rat Genome Database

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Gene: Foxk1 (forkhead box K1) Chinchilla lanigera
Analyze
Symbol: Foxk1
Name: forkhead box K1
RGD ID: 9024722
Description: ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); intracellular glucose homeostasis (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); megacolon (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: forkhead box protein K1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546011,018,177 - 11,067,443 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546011,011,498 - 11,067,443 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Foxk1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546011,018,177 - 11,067,443 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546011,011,498 - 11,067,443 (-)NCBIChiLan1.0ChiLan1.0
FOXK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3874,682,295 - 4,771,442 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl74,682,295 - 4,771,442 (+)EnsemblGRCh38hg38GRCh38
GRCh3774,721,926 - 4,811,073 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3674,688,456 - 4,777,600 (+)NCBINCBI36Build 36hg18NCBI36
Celera74,681,702 - 4,770,725 (+)NCBICelera
Cytogenetic Map7p22.1NCBI
HuRef74,638,801 - 4,727,921 (+)NCBIHuRef
CHM1_174,721,765 - 4,810,819 (+)NCBICHM1_1
T2T-CHM13v2.074,799,494 - 4,888,656 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v274,768,285 - 4,857,429 (+)NCBI
Foxk1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395142,387,252 - 142,447,770 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5142,387,252 - 142,447,766 (+)EnsemblGRCm39 Ensembl
GRCm385142,401,497 - 142,462,015 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5142,401,497 - 142,462,011 (+)EnsemblGRCm38mm10GRCm38
MGSCv375142,877,451 - 142,937,969 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365142,653,971 - 142,714,489 (+)NCBIMGSCv36mm8
Celera5139,456,420 - 139,517,061 (+)NCBICelera
Cytogenetic Map5G2NCBI
cM Map581.53NCBI
Foxk1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81217,223,599 - 17,288,564 (-)NCBIGRCr8
mRatBN7.21212,110,119 - 12,175,089 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1212,115,950 - 12,175,089 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1212,918,156 - 12,977,276 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01213,541,388 - 13,600,507 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01212,572,515 - 12,631,638 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01214,183,436 - 14,244,634 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1214,180,029 - 14,244,316 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01216,212,041 - 16,270,069 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41212,513,060 - 12,568,394 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11212,522,087 - 12,598,295 (-)NCBI
Celera1213,898,413 - 13,956,060 (-)NCBICelera
Cytogenetic Map12q11NCBI
FOXK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v269,648,293 - 9,737,438 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1757,973,005 - 58,062,142 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v074,934,773 - 5,017,127 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.174,935,681 - 5,061,351 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl74,975,444 - 5,056,174 (+)Ensemblpanpan1.1panPan2
FOXK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1612,863,093 - 12,931,877 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl612,869,940 - 12,930,954 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha614,333,953 - 14,401,879 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0612,999,430 - 13,067,373 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl613,006,268 - 13,067,454 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1612,810,158 - 12,878,093 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0612,743,136 - 12,811,036 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0613,019,324 - 13,087,278 (-)NCBIUU_Cfam_GSD_1.0
Foxk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344141,138,037 - 141,199,596 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367651,133,287 - 1,148,907 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367651,126,168 - 1,255,354 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FOXK1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl33,556,161 - 3,621,142 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.133,556,139 - 3,621,150 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.234,203,703 - 4,269,535 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FOXK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12816,875,747 - 16,962,813 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2816,880,884 - 16,962,734 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660904,956,636 - 5,044,930 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Foxk1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474028,538,745 - 28,585,886 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474028,533,708 - 28,585,880 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000011736   ⟹   ENSCLAP00000011599
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495546011,018,177 - 11,067,443 (-)Ensembl
RefSeq Acc Id: XM_005397856   ⟹   XP_005397913
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495546011,011,498 - 11,067,443 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005397913 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000011599
  ENSCLAP00000011599.1
Reference Protein Sequences
RefSeq Acc Id: XP_005397913   ⟸   XM_005397856
- UniProtKB: A0A8C2VA49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000011599   ⟸   ENSCLAT00000011736
Protein Domains
FHA   Fork-head


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000007995 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000011736 ENTREZGENE
  ENSCLAT00000011736.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/TrEMBL
  2.60.200.20 UniProtKB/TrEMBL
InterPro FH_FOXK1 UniProtKB/TrEMBL
  FHA_dom UniProtKB/TrEMBL
  Fork_head_dom UniProtKB/TrEMBL
  SMAD_FHA_dom_sf UniProtKB/TrEMBL
  TF_fork_head_CS_1 UniProtKB/TrEMBL
  TF_fork_head_CS_2 UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
NCBI Gene Foxk1 ENTREZGENE
PANTHER CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED UniProtKB/TrEMBL
  FORKHEAD BOX PROTEIN K1 UniProtKB/TrEMBL
Pfam FHA UniProtKB/TrEMBL
  Forkhead UniProtKB/TrEMBL
PRINTS FORKHEAD UniProtKB/TrEMBL
PROSITE FHA_DOMAIN UniProtKB/TrEMBL
  FORK_HEAD_1 UniProtKB/TrEMBL
  FORK_HEAD_2 UniProtKB/TrEMBL
  FORK_HEAD_3 UniProtKB/TrEMBL
SMART FHA UniProtKB/TrEMBL
  SM00339 UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/TrEMBL
  SSF49879 UniProtKB/TrEMBL
UniProt A0A8C2VA49 ENTREZGENE, UniProtKB/TrEMBL