Myl10 (myosin light chain 10) - Rat Genome Database

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Gene: Myl10 (myosin light chain 10) Chinchilla lanigera
Analyze
Symbol: Myl10
Name: myosin light chain 10
RGD ID: 9014834
Description: ASSOCIATED WITH genetic disease (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myosin regulatory light chain 10; myosin, light chain 10, regulatory
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545615,754,234 - 15,763,987 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545615,754,234 - 15,763,987 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Myl10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545615,754,234 - 15,763,987 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545615,754,234 - 15,763,987 (+)NCBIChiLan1.0ChiLan1.0
MYL10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387101,613,330 - 101,629,296 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7101,613,330 - 101,629,296 (-)EnsemblGRCh38hg38GRCh38
GRCh377101,256,610 - 101,272,576 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367101,043,475 - 101,059,118 (-)NCBINCBI36Build 36hg18NCBI36
Celera796,264,670 - 96,280,650 (-)NCBICelera
Cytogenetic Map7q22.1NCBI
HuRef795,845,759 - 95,861,739 (-)NCBIHuRef
CHM1_17101,188,570 - 101,204,545 (-)NCBICHM1_1
T2T-CHM13v2.07102,933,202 - 102,949,180 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27100,614,992 - 100,630,963 (-)NCBI
Myl10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395136,717,749 - 136,730,711 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5136,722,000 - 136,729,948 (+)EnsemblGRCm39 Ensembl
GRCm385136,688,892 - 136,701,857 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5136,693,146 - 136,701,094 (+)EnsemblGRCm38mm10GRCm38
MGSCv375137,169,016 - 137,176,964 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365136,977,773 - 136,985,721 (+)NCBIMGSCv36mm8
Celera5133,714,303 - 133,722,952 (+)NCBICelera
Cytogenetic Map5G2NCBI
cM Map576.03NCBI
Myl10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81225,606,558 - 25,619,270 (-)NCBIGRCr8
mRatBN7.21219,969,174 - 19,982,627 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1219,970,055 - 19,978,614 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01223,011,817 - 23,075,558 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1223,011,942 - 23,021,517 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01225,014,687 - 25,076,471 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41221,082,810 - 21,095,985 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1221,742,549 - 21,805,591 (-)NCBICelera
Cytogenetic Map12q12NCBI
MYL10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26119,623,857 - 119,639,811 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17167,888,482 - 167,904,436 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0793,751,255 - 93,767,214 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17106,986,547 - 107,002,325 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7106,986,697 - 107,002,148 (-)Ensemblpanpan1.1panPan2
MYL10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.168,313,891 - 8,333,518 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl68,301,401 - 8,333,520 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha610,011,744 - 10,031,367 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.068,133,669 - 8,153,299 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl68,142,574 - 8,153,299 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.168,089,981 - 8,109,600 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.068,064,717 - 8,084,345 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.068,229,569 - 8,249,192 (+)NCBIUU_Cfam_GSD_1.0
Myl10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344132,641,074 - 132,676,429 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365431,359,413 - 1,395,611 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365431,360,101 - 1,368,686 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYL10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl39,187,812 - 9,198,493 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.139,187,808 - 9,198,476 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.238,726,761 - 8,738,595 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MYL10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12811,559,077 - 11,570,826 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660704,828,432 - 4,845,614 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Myl10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474015,773,217 - 15,784,513 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474015,731,519 - 15,784,472 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000013140   ⟹   ENSCLAP00000012990
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545615,754,234 - 15,763,987 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000013141   ⟹   ENSCLAP00000012991
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545615,756,701 - 15,762,780 (+)Ensembl
RefSeq Acc Id: XM_005396852   ⟹   XP_005396909
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545615,754,234 - 15,763,987 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005396909 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000012990
  ENSCLAP00000012990.1
  ENSCLAP00000012991.1
Reference Protein Sequences
RefSeq Acc Id: XP_005396909   ⟸   XM_005396852
- UniProtKB: A0A8C2VEU7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000012990   ⟸   ENSCLAT00000013140
RefSeq Acc Id: ENSCLAP00000012991   ⟸   ENSCLAT00000013141
Protein Domains
EF-hand


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008965 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000013140 ENTREZGENE
  ENSCLAT00000013140.1 UniProtKB/TrEMBL
  ENSCLAT00000013141.1 UniProtKB/TrEMBL
Gene3D-CATH EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
NCBI Gene Myl10 ENTREZGENE
PANTHER MYOSIN REGULATORY LIGHT CHAIN 10 UniProtKB/TrEMBL
  MYOSIN REGULATORY LIGHT CHAIN 2 UniProtKB/TrEMBL
Pfam EF-hand_1 UniProtKB/TrEMBL
  EF-hand_7 UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
SMART EFh UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
UniProt A0A8C2VEU7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VHK9_CHILA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Myl10  myosin light chain 10    myosin, light chain 10, regulatory  Symbol and/or name change 5135510 APPROVED