Suox (sulfite oxidase) - Rat Genome Database

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Gene: Suox (sulfite oxidase) Chinchilla lanigera
Analyze
Symbol: Suox
Name: sulfite oxidase
RGD ID: 9004319
Description: ENCODES a protein that exhibits heme binding (ortholog); molybdopterin cofactor binding (ortholog); sulfite oxidase activity (ortholog); INVOLVED IN response to nutrient (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Diamond-Blackfan anemia 10 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: sulfite oxidase, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554583,585,482 - 3,590,559 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554583,584,390 - 3,589,764 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Suox
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554583,585,482 - 3,590,559 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554583,584,390 - 3,589,764 (+)NCBIChiLan1.0ChiLan1.0
SUOX
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381255,997,276 - 56,005,525 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1255,997,180 - 56,006,641 (+)EnsemblGRCh38hg38GRCh38
GRCh371256,391,060 - 56,399,309 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361254,677,310 - 54,685,576 (+)NCBINCBI36Build 36hg18NCBI36
Build 341254,681,548 - 54,685,109NCBI
Celera1256,043,727 - 56,051,993 (+)NCBICelera
Cytogenetic Map12q13.2NCBI
HuRef1253,429,929 - 53,438,195 (+)NCBIHuRef
CHM1_11256,358,154 - 56,366,418 (+)NCBICHM1_1
T2T-CHM13v2.01255,964,339 - 55,972,588 (+)NCBIT2T-CHM13v2.0
Suox
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910128,505,756 - 128,509,787 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10128,505,763 - 128,509,942 (-)EnsemblGRCm39 Ensembl
GRCm3810128,669,887 - 128,673,918 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10128,669,894 - 128,674,073 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710128,106,943 - 128,110,974 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610128,072,843 - 128,076,810 (-)NCBIMGSCv36mm8
Celera10131,061,992 - 131,066,023 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1077.12NCBI
Suox
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr871,687,666 - 1,691,759 (-)NCBIGRCr8
mRatBN7.271,103,149 - 1,107,156 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl71,103,151 - 1,107,038 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx73,866,328 - 3,868,898 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.075,742,000 - 5,744,570 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.076,039,038 - 6,041,607 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.073,098,228 - 3,102,179 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl73,098,245 - 3,102,142 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.073,070,928 - 3,074,829 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.471,973,471 - 1,976,040 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.171,973,472 - 1,976,040 (-)NCBI
Celera7973,358 - 975,927 (-)NCBICelera
Cytogenetic Map7q11NCBI
SUOX
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21038,324,140 - 38,332,458 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11238,320,911 - 38,329,282 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01232,907,456 - 32,915,788 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11233,157,277 - 33,165,712 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1233,157,277 - 33,165,661 (-)Ensemblpanpan1.1panPan2
SUOX
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.110327,656 - 331,826 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl10327,671 - 331,825 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha10389,623 - 393,749 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.010334,299 - 338,424 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl10334,270 - 338,424 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.110312,312 - 316,438 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.010554,865 - 558,990 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.010679,365 - 683,493 (+)NCBIUU_Cfam_GSD_1.0
Suox
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494558,454,620 - 58,458,747 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936646411,084 - 415,732 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936646411,543 - 415,709 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SUOX
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl521,395,262 - 21,399,710 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1521,395,246 - 21,399,715 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SUOX
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11151,935,809 - 51,943,090 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1151,939,809 - 51,942,603 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037194,044,119 - 194,051,273 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Suox
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480212,047,270 - 12,054,523 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480212,049,787 - 12,054,810 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000020223   ⟹   ENSCLAP00000020030
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554583,585,482 - 3,590,559 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000020224   ⟹   ENSCLAP00000020031
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554583,586,160 - 3,590,559 (+)Ensembl
RefSeq Acc Id: XM_005397279   ⟹   XP_005397336
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554583,584,390 - 3,589,764 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005397280   ⟹   XP_005397337
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554583,584,390 - 3,589,764 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005397281   ⟹   XP_005397338
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554583,584,390 - 3,589,764 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013520978   ⟹   XP_013376432
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554583,584,390 - 3,589,764 (+)NCBI
Sequence:
RefSeq Acc Id: XP_005397336   ⟸   XM_005397279
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VSK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005397338   ⟸   XM_005397281
- Peptide Label: isoform X2
- UniProtKB: A0A8C2VSK2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005397337   ⟸   XM_005397280
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VSK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013376432   ⟸   XM_013520978
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VSK8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000020031   ⟸   ENSCLAT00000020224
RefSeq Acc Id: ENSCLAP00000020030   ⟸   ENSCLAT00000020223
Protein Domains
Cytochrome b5 heme-binding


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000013725 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000020223 ENTREZGENE
  ENSCLAT00000020223.1 UniProtKB/TrEMBL
  ENSCLAT00000020224 ENTREZGENE
  ENSCLAT00000020224.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.650 UniProtKB/TrEMBL
  3.10.120.10 UniProtKB/TrEMBL
  3.90.420.10 UniProtKB/TrEMBL
InterPro Cyt_B5-like_heme/steroid-bd UniProtKB/TrEMBL
  Cyt_B5-like_heme/steroid_sf UniProtKB/TrEMBL
  Cyt_B5_heme-BS UniProtKB/TrEMBL
  Ig_E-set UniProtKB/TrEMBL
  MoCF_OxRdtse_dimer UniProtKB/TrEMBL
  Mopterin_OxRdtase_euk UniProtKB/TrEMBL
  OxRdtase_Mopterin-bd_dom UniProtKB/TrEMBL
  OxRdtase_Mopterin-bd_sf UniProtKB/TrEMBL
NCBI Gene Suox ENTREZGENE
PANTHER SULFITE OXIDASE, MITOCHONDRIAL UniProtKB/TrEMBL
  SULFITE REDUCTASE UniProtKB/TrEMBL
Pfam Cyt-b5 UniProtKB/TrEMBL
  Mo-co_dimer UniProtKB/TrEMBL
  Oxidored_molyb UniProtKB/TrEMBL
PRINTS CYTOCHROMEB5 UniProtKB/TrEMBL
  EUMOPTERIN UniProtKB/TrEMBL
PROSITE CYTOCHROME_B5_1 UniProtKB/TrEMBL
  CYTOCHROME_B5_2 UniProtKB/TrEMBL
SMART Cyt-b5 UniProtKB/TrEMBL
Superfamily-SCOP SSF55856 UniProtKB/TrEMBL
  SSF56524 UniProtKB/TrEMBL
  SSF81296 UniProtKB/TrEMBL
UniProt A0A8C2VSK2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2VSK8 ENTREZGENE, UniProtKB/TrEMBL