Shmt2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955458 | 4,957,602 - 4,962,691 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955458 | 4,957,614 - 4,962,691 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SHMT2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 57,229,711 - 57,234,935 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 57,229,573 - 57,234,935 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 57,623,494 - 57,628,718 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 55,909,819 - 55,914,981 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 55,909,818 - 55,914,981 | NCBI | | | | | Celera | 12 | 57,277,587 - 57,282,945 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | q13.3 | NCBI | | | | | HuRef | 12 | 54,662,237 - 54,667,595 (+) | NCBI | | HuRef | | | CHM1_1 | 12 | 57,591,454 - 57,596,816 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 57,197,949 - 57,203,173 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Shmt2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 127,352,992 - 127,358,313 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 127,352,992 - 127,358,313 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 127,517,123 - 127,522,444 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 127,517,123 - 127,522,444 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 126,954,195 - 126,959,491 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 126,920,088 - 126,925,384 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 129,908,893 - 129,914,189 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | D3 | NCBI | | | | | cM Map | 10 | 74.51 | NCBI | | | | |
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Shmt2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 65,244,247 - 65,249,580 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 63,358,961 - 63,364,293 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 63,358,961 - 63,364,236 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 65,248,234 - 65,253,554 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 67,450,661 - 67,455,981 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 67,251,885 - 67,257,207 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 70,824,718 - 70,829,822 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 70,824,715 - 70,829,815 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 70,998,103 - 71,003,197 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 67,494,470 - 67,499,540 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 67,515,199 - 67,520,270 (-) | NCBI | | | | | Celera | 7 | 60,498,180 - 60,503,250 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q22 | NCBI | | | | |
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SHMT2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 37,106,967 - 37,112,419 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 37,103,737 - 37,108,804 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 31,692,451 - 31,697,727 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 31,944,787 - 31,950,138 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 31,944,785 - 31,950,138 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SHMT2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 10 | 1,357,347 - 1,362,511 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 1,356,706 - 1,362,305 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 1,421,107 - 1,426,256 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 1,367,808 - 1,372,957 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 1,367,831 - 1,372,939 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 10 | 1,344,398 - 1,349,547 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 1,586,394 - 1,591,543 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 1,711,303 - 1,716,453 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Shmt2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 57,442,306 - 57,447,426 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936646 | 1,422,817 - 1,429,037 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936646 | 1,422,844 - 1,427,929 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SHMT2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 5 | 22,532,894 - 22,540,319 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 22,535,780 - 22,540,322 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 24,368,828 - 24,374,450 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SHMT2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 53,141,435 - 53,146,625 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 53,141,462 - 53,147,795 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 192,825,670 - 192,831,284 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Shmt2 (Heterocephalus glaber - naked mole-rat) |
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