| Gene: Dytn (dystrotelin) Chinchilla lanigera |
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Analyze |
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| Symbol: |
Dytn |
| Name: |
dystrotelin |
| RGD ID: |
8989734 |
| Description: |
ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); primary pulmonary hypertension (ortholog) |
| Type: |
protein-coding
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| RefSeq Status: |
MODEL |
| RGD Orthologs |
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| Alliance Genes |
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| More Info |
more info ...
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| More Info |
| Species |
Gene symbol and name |
Data Source |
Assertion derived from |
less info ...
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| Orthologs 1 |
| Homo sapiens (human): |
DYTN (dystrotelin) |
NCBI |
Ortholog |
| Mus musculus (house mouse): |
Dytn (dystrotelin) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Rattus norvegicus (Norway rat): |
Dytn (dystrotelin) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Pan paniscus (bonobo/pygmy chimpanzee): |
DYTN (dystrotelin) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Canis lupus familiaris (dog): |
DYTN (dystrotelin) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Ictidomys tridecemlineatus (thirteen-lined ground squirrel): |
Dytn (dystrotelin) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Sus scrofa (pig): |
DYTN (dystrotelin) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Chlorocebus sabaeus (green monkey): |
DYTN (dystrotelin) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
| Heterocephalus glaber (naked mole-rat): |
Dytn (dystrotelin) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
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| Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 | NW_004955457 | 8,269,960 - 8,332,498 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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Imported Disease Annotations - ClinVar
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References
Additional References at PubMed
Genomics
Comparative Map Data
Dytn
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 | NW_004955457 | 8,269,960 - 8,332,498 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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DYTN
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 2 | 206,651,621 - 206,718,396 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 206,651,621 - 206,721,570 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 207,516,345 - 207,583,120 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 207,224,590 - 207,291,365 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 2 | 201,277,772 - 201,344,552 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q33.3 | NCBI | | | | | HuRef | 2 | 199,365,880 - 199,432,590 (-) | NCBI | | HuRef | | | CHM1_1 | 2 | 207,522,178 - 207,588,966 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 207,133,738 - 207,200,502 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Dytn
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 63,662,010 - 63,726,086 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 63,662,010 - 63,726,086 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 63,622,851 - 63,686,927 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 63,622,851 - 63,686,927 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 63,669,425 - 63,733,501 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 63,669,425 - 63,733,501 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 64,145,438 - 64,213,125 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | C2 | NCBI | | | | | cM Map | 1 | 32.31 | NCBI | | | | |
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Dytn
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 9 | 72,531,151 - 72,592,486 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 65,037,378 - 65,098,549 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 9 | 65,037,493 - 65,098,549 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 9 | 70,320,443 - 70,384,485 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 9 | 70,320,443 - 70,374,553 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 72,191,299 - 72,252,801 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 62,280,863 - 62,344,738 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 9 | 62,449,630 - 62,512,366 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q32 | NCBI | | | | |
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DYTN
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 13 | 109,259,737 - 109,326,609 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 109,274,716 - 109,341,588 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 93,886,337 - 93,952,708 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 212,014,554 - 212,080,753 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2B | 212,014,554 - 212,073,079 (-) | Ensembl | panpan1.1 | | panPan2 | |
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DYTN
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 37 | 15,195,443 - 15,241,807 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 37 | 15,195,536 - 15,244,937 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 37 | 16,072,907 - 16,125,819 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 37 | 15,132,051 - 15,178,421 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 37 | 15,132,144 - 15,181,551 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 37 | 15,083,062 - 15,130,718 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 37 | 15,056,668 - 15,103,758 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 37 | 15,054,549 - 15,107,924 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Dytn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405303 | 163,340,466 - 163,406,142 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936631 | 2,975,509 - 3,030,779 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936631 | 2,975,543 - 3,041,219 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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DYTN
(Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 15 | 109,918,004 - 109,976,388 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 109,918,321 - 109,976,388 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 121,492,679 - 121,533,540 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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DYTN
(Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 10 | 92,423,056 - 92,495,677 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 10 | 92,423,591 - 92,485,932 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 106,866,227 - 106,957,726 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Dytn
(Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
| RefSeq Acc Id: |
XM_013520662 ⟹ XP_013376116 |
| Type: |
CODING |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source |
|---|
ChiLan1.0 | NW_004955457 | 8,269,960 - 8,332,498 (+) | NCBI |
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| Sequence: |
ATGCATTATACTGCGAGTAACACGCCTGTGCTGCAGGCTCAGATATTTTTGAGACACATATTAA
AGCTGATTTCTTACATCCTCAGCAGCCCAAAGACCTTAATGCTACAACGACCCTCCTGCCATCC
GTCATCTCAAACAACTCAGGAAATGGACTCCAGTAAACAAGGCTTGGGACAAAGACTAGGTGTA
AGATCGGAATCAGACCTGACTGTTCTGGCCCCCAACCTGCCGGCCAGCAGAAGCACTACTCTCT
GCAGGGAACTCAGCTCAGTACTGAAGTTGTCATCTACAAGTACAGGATGTGAAGGAGATGAGCT
TGCCATGTCATGCCGCATAGCTTCATCAGATGACTCTGCAAAGCAGCACTTGACAGGAGCGATG
GGCCAGATGGTCGGGCTGTCACAGAGCTACTCCTCCACCCGCAGAGCCCCTGACACTCCTCATA
GTAGTGAGAATTCCATTTACAGAACAGCCTTCAAATTACGATCAGTGCAAACTCTATGCCAGTT
GGACTTGGTCAGCAGCACCCTGGTTCAGGAGGTCCTACTCCATCCACGTGTCTGGAAGGCCAGT
GCGCACTCCCTTTCTGTGCCGCAGCTTTTTCGGGCCCTCCAGGAGCTGTTTCAGAGAGCCAGGG
TGGAGACACGGGGGCAGGCACAGCCCAGAGCTTCGGAACTCACTTTGAGCCTCCTCATGGCCAT
GTTTGACAGCACAGGAGTGGGTGTTCTCAAGCTTCTGCCCGTAGCCGCGGCCCTCATTGCACTC
TCAGGGGACAGCCCTCTGACAAAGTACAGAGCTCTTTTTCAGCTCTATGCAGAAAATAACAAGG
GAGGTAATGAATCCGGGACTAGAATCACTCGGAGGATTCTGAGAAACTTACTAACAGATCTACA
GCAGATCCCAACTGTTGTGGGCGAGAGTCGCACGCTGAGCTCGGTGAACAGCGCTGTCCGCAGC
TGTTTCCAAGGGGTGGTGAGCCCAGGAATCAAAGAGGAGAAATTCCTGTCTTGGGTACAGTCCG
AGCCTCTCATCCTCCTGTGGCTCCCAACCTGCTATCGACTGTCAGCCACAGAAATGGTCACTCA
CCCCGTTCGGTGCGGCATCTGCAGGGCCTTTCCCATCACAGGACTGAGGTACCGCTGTCTGAAG
TGTCTCAACTTTGACATGTGCCAGGTGTGTTTCTTATCTGGTGTCCACAGCAAGTCTCACCAGA
AGTCACATCCTGTAATTGAACACTGTGTTCAGCTGTCAGCAAAGGAGAATACAAAACTCCTTCT
CAAGACGCTCAGAAACAACCTGCTCCAGGGCCGCTGTCCGAGAAGAGGAGATCCAAGAAGACCA
TGGCTGCTGAAGCAGGTGAAACCGGACGACCCAGCTCACCACGCACAGGCTGAAAAAGAAAGAC
ACTCAGTATTCCGTGGTGTGCAGATCAGTGCCATTCATGTTTTAGTGTTTCCCATGCATAGATC
ACACGATAGGCGCAATTTTTCATTCTTCTCCTCACCTACACCAACTGGAGAGTGTGTCCGTGTT
TTGCTGGGAAAATGTGTTTGTACCCCCCAAGTAACGGGGTGTGGCTGCAGTATTTACAGGTATG
TGGAAGACACTCTGGTGCTGGCTGACGCGTACATCCCCAGCGGAGGTCCAACTGAAGTGGGCTA
CCTTCCTCTTTTAGCTCTCATGCTGCTCTCCATTCAGTGCAATCACTCTAAAAATCCTGTGTGT
GTAAGGCCATCGAGACCCGTGGAGGCAACAGCCACAGAAACCCCCAGCTGTGATCATCAGAGAT
TATCTCAGGCTCAGCACGTGAGCCACACCGGCCCACATCACCAAACCGTGGTCAGCATTAGGAA
TGAACTGTGGAGGACTCGTGAATCCATTAATGCTCTCCAGAGAGAAAGAAGGCTCCTTAAAATG
CAGTTAAATGAATACAAAGACAAGTTGCGAGCAATATATACCTTCCAGGAGGAAAAAAGTTGCA
GATTTGAGACAAAGATTCAGGAACTCACAAGCAACCAGAATAGTCTATGGTCCAAGCTACAGCA
GATGCGACAAGATGTACAGGCAATGTTGCAGCCACTCCATCCTTTGTCTTCCTGCCAACATATG
GTGTCCAAGGTTGATTGTTCTTCAATGGATCAGTTTTGGAAGGGAAGAGATTCTTATCATATCA
AGAATGGCACTCAGGATGGTCCAGCTTGGAATCCTCTTCCTAACCCTGCCCTGGTTGACAGAAG
CCAAGCAAATGAAGACCATGCTCCTCCAGATTCAGAATCACCAGCAACCATGGTGCAAACCACC
AGCGCACAAAGCTACACACAAAAGATACCAAAGAAAATCCTCAGCTCCCTGCCCAGTTATCAAC
AGGGGCTTCTTCAAGACAAGCCCCAAATTTCTCCCGCTGAAATGAGCAGCACTGCTCTGGCATC
AGCGGGAAAGGAAGTGGTGGTTAACGTTGCAGGAAGAAAGGATGAGCTGGAGGAACAGGAACTA
CAGGAGCTACTGTCAAAACTCATGGGAGCATTCAATCCAGAAAGGCCATCAGGTCCCCAGTCCT
CAGTGAACGTGGATCTGTATGGTGGAGCTGAGCGGGTGTGCAGGGCTTTCTCTGCCCTTGTGGA
TCAAATCACCTTGCCCAGCATGAGTGAAAAGGAGTCCAGGCTGAAAGCCCCTTCATATGGTGAT
AAATGCTCTTTCAGAATCTGA
hide sequence
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| RefSeq Acc Id: |
XP_013376116 ⟸ XM_013520662 |
| - Sequence: |
MHYTASNTPVLQAQIFLRHILKLISYILSSPKTLMLQRPSCHPSSQTTQEMDSSKQGLGQRLGV
RSESDLTVLAPNLPASRSTTLCRELSSVLKLSSTSTGCEGDELAMSCRIASSDDSAKQHLTGAM
GQMVGLSQSYSSTRRAPDTPHSSENSIYRTAFKLRSVQTLCQLDLVSSTLVQEVLLHPRVWKAS
AHSLSVPQLFRALQELFQRARVETRGQAQPRASELTLSLLMAMFDSTGVGVLKLLPVAAALIAL
SGDSPLTKYRALFQLYAENNKGGNESGTRITRRILRNLLTDLQQIPTVVGESRTLSSVNSAVRS
CFQGVVSPGIKEEKFLSWVQSEPLILLWLPTCYRLSATEMVTHPVRCGICRAFPITGLRYRCLK
CLNFDMCQVCFLSGVHSKSHQKSHPVIEHCVQLSAKENTKLLLKTLRNNLLQGRCPRRGDPRRP
WLLKQVKPDDPAHHAQAEKERHSVFRGVQISAIHVLVFPMHRSHDRRNFSFFSSPTPTGECVRV
LLGKCVCTPQVTGCGCSIYRYVEDTLVLADAYIPSGGPTEVGYLPLLALMLLSIQCNHSKNPVC
VRPSRPVEATATETPSCDHQRLSQAQHVSHTGPHHQTVVSIRNELWRTRESINALQRERRLLKM
QLNEYKDKLRAIYTFQEEKSCRFETKIQELTSNQNSLWSKLQQMRQDVQAMLQPLHPLSSCQHM
VSKVDCSSMDQFWKGRDSYHIKNGTQDGPAWNPLPNPALVDRSQANEDHAPPDSESPATMVQTT
SAQSYTQKIPKKILSSLPSYQQGLLQDKPQISPAEMSSTALASAGKEVVVNVAGRKDELEEQEL
QELLSKLMGAFNPERPSGPQSSVNVDLYGGAERVCRAFSALVDQITLPSMSEKESRLKAPSYGD
KCSFRI
hide sequence
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Additional Information
External Database Links
| Database |
Acc Id |
Source(s) |
| NCBI Gene |
Dytn |
ENTREZGENE |
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