Rps6ka6 (ribosomal protein S6 kinase A6) - Rat Genome Database

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Gene: Rps6ka6 (ribosomal protein S6 kinase A6) Chinchilla lanigera
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Symbol: Rps6ka6
Name: ribosomal protein S6 kinase A6
RGD ID: 8988619
Description: INVOLVED IN DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (ortholog); negative regulation of embryonic development (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); syndromic X-linked intellectual disability Lubs type (ortholog); FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleolus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ribosomal protein S6 kinase alpha-6; ribosomal protein S6 kinase, 90kDa, polypeptide 6
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555293,149,407 - 3,296,105 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555293,115,652 - 3,296,505 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Rps6ka6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555293,149,407 - 3,296,105 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555293,115,652 - 3,296,505 (-)NCBIChiLan1.0ChiLan1.0
RPS6KA6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX84,058,346 - 84,188,199 (-)EnsemblGRCh38hg38GRCh38
GRCh38X84,058,346 - 84,188,199 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X83,313,354 - 83,443,207 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X83,205,640 - 84,362,350 (-)NCBINCBI36hg18NCBI36
Build 34X83,125,128 - 83,254,098NCBI
CeleraX83,550,763 - 83,681,714 (-)NCBI
Cytogenetic MapXq21.1NCBI
HuRefX76,885,898 - 76,994,131 (-)NCBIHuRef
CHM1_1X83,207,273 - 83,336,842 (-)NCBICHM1_1
Rps6ka6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X110,297,534 - 110,447,794 (-)NCBIGRCm39mm39
GRCm39 EnsemblX110,297,889 - 110,447,656 (-)Ensembl
GRCm38X111,387,837 - 111,538,097 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX111,388,192 - 111,537,959 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X108,501,801 - 108,651,554 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X107,505,136 - 107,654,889 (-)NCBImm8
CeleraX98,071,699 - 98,217,087 (-)NCBICelera
Cytogenetic MapXE1NCBI
Rps6ka6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X76,354,824 - 76,454,484 (-)NCBI
Rnor_6.0 EnsemblX82,641,687 - 82,743,753 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X82,641,679 - 82,743,771 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X82,609,740 - 82,710,719 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X99,798,274 - 99,901,585 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX77,660,385 - 77,759,926 (-)NCBICelera
Cytogenetic MapXq31NCBI
RPS6KA6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X83,242,717 - 83,373,450 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX83,243,957 - 83,373,194 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X73,131,457 - 73,261,906 (-)NCBIMhudiblu_PPA_v0panPan3
RPS6KA6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X64,915,871 - 65,111,095 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX64,921,230 - 65,111,116 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX55,672,366 - 55,868,014 (-)NCBI
ROS_Cfam_1.0X66,239,816 - 66,439,714 (-)NCBI
UMICH_Zoey_3.1X63,893,818 - 64,089,422 (-)NCBI
UNSW_CanFamBas_1.0X65,525,394 - 65,721,255 (-)NCBI
UU_Cfam_GSD_1.0X65,099,716 - 65,295,248 (-)NCBI
Rps6ka6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X58,533,568 - 58,632,733 (-)NCBI
SpeTri2.0NW_0049365474,846,012 - 4,952,773 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPS6KA6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX67,236,473 - 67,415,024 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X67,234,684 - 67,415,114 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X77,099,566 - 77,278,238 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RPS6KA6
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X72,942,352 - 73,081,174 (-)NCBI
ChlSab1.1 EnsemblX72,942,648 - 73,080,887 (-)Ensembl
Vero_WHO_p1.0NW_0236660677,794,891 - 7,927,152 (+)NCBI
Rps6ka6
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248524,287,104 - 4,492,128 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000012874   ⟹   ENSCLAP00000012726
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555293,149,407 - 3,296,105 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000012875   ⟹   ENSCLAP00000012727
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555293,149,407 - 3,296,105 (-)Ensembl
RefSeq Acc Id: XM_005410079   ⟹   XP_005410136
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555293,149,100 - 3,296,400 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013507539   ⟹   XP_013362993
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555293,115,652 - 3,296,505 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005410136 (Get FASTA)   NCBI Sequence Viewer  
  XP_013362993 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005410136   ⟸   XM_005410079
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013362993   ⟸   XM_013507539
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000012727   ⟸   ENSCLAT00000012875
RefSeq Acc Id: ENSCLAP00000012726   ⟸   ENSCLAT00000012874


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008786 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000012726 ENTREZGENE
Ensembl Transcript ENSCLAT00000012874 ENTREZGENE
NCBI Gene Rps6ka6 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Rps6ka6  ribosomal protein S6 kinase A6    ribosomal protein S6 kinase, 90kDa, polypeptide 6  Symbol and/or name change 5135510 APPROVED