Ypel4 (yippee like 4) - Rat Genome Database

Name: Ypel4
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Ypel4 (yippee like 4) Chinchilla lanigera

Analyze

Symbol:

Ypel4

Name:

yippee like 4

RGD ID:

8988488

Description:

INVOLVED IN negative regulation of erythrocyte clearance (ortholog); negative regulation of erythrocyte differentiation (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

yippee-like 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	YPEL4 (yippee like 4)	NCBI	Ortholog
Mus musculus (house mouse):	Ypel4 (yippee like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ypel4 (yippee-like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	YPEL4 (yippee like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	YPEL4 (yippee like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ypel4 (yippee like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	YPEL4 (yippee like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	YPEL4 (yippee like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ypel4 (yippee like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955511	2,580,518 - 2,588,753 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955511	2,580,518 - 2,588,753 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of erythrocyte clearance (ISO)

negative regulation of erythrocyte differentiation (ISO)

protein localization to plasma membrane (ISO)

regulation of cell shape (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Ypel4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955511	2,580,518 - 2,588,753 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955511	2,580,518 - 2,588,753 (-)	NCBI	ChiLan1.0	ChiLan1.0

YPEL4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	57,645,087 - 57,649,912 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	57,645,087 - 57,649,944 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	57,412,560 - 57,417,385 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	57,169,137 - 57,173,993 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	57,169,136 - 57,173,993	NCBI
Celera	11	54,769,044 - 54,773,901 (-)	NCBI		Celera
Cytogenetic Map	11	q12.1	NCBI
HuRef	11	53,761,307 - 53,766,337 (-)	NCBI		HuRef
CHM1_1	11	57,278,768 - 57,283,625 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	57,595,261 - 57,603,883 (-)	NCBI		T2T-CHM13v2.0

Ypel4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	84,564,355 - 84,568,999 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	84,564,402 - 84,568,999 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	84,734,011 - 84,738,655 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	84,734,058 - 84,738,655 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	84,574,361 - 84,578,034 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	84,535,043 - 84,538,716 (+)	NCBI		MGSCv36	mm8
Celera	2	86,329,399 - 86,333,068 (+)	NCBI		Celera
Cytogenetic Map	2	D	NCBI
cM Map	2	49.45	NCBI

Ypel4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	90,222,060 - 90,227,395 (+)	NCBI		GRCr8
mRatBN7.2	3	69,815,373 - 69,820,708 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	69,816,175 - 69,820,707 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	73,197,978 - 73,202,512 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	81,796,640 - 81,801,174 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	79,555,560 - 79,560,084 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	72,134,719 - 72,139,204 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	72,134,731 - 72,141,035 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	78,655,360 - 78,659,864 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	67,945,706 - 67,947,569 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	69,171,695 - 69,176,228 (+)	NCBI		Celera
Cytogenetic Map	3	q24	NCBI

YPEL4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	58,801,465 - 58,806,316 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	59,821,425 - 59,826,276 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	52,885,902 - 52,890,753 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	56,356,813 - 56,361,669 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	56,356,813 - 56,360,002 (-)	Ensembl	panpan1.1		panPan2

YPEL4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	38,535,792 - 38,541,183 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	38,539,190 - 38,540,303 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	38,082,881 - 38,087,589 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	39,218,290 - 39,222,997 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	39,218,398 - 39,222,681 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	38,801,383 - 38,806,089 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	38,374,404 - 38,379,112 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	39,005,150 - 39,009,857 (+)	NCBI		UU_Cfam_GSD_1.0

Ypel4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	14,763,521 - 14,768,524 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936581	4,877,332 - 4,883,364 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936581	4,877,357 - 4,882,346 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

YPEL4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	13,289,402 - 13,294,233 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	13,289,369 - 13,294,245 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	12,922,576 - 12,927,430 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

YPEL4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	15,579,397 - 15,584,988 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	15,579,766 - 15,587,655 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	112,931,259 - 112,936,099 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ypel4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624864	3,067,183 - 3,074,668 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624864	3,067,184 - 3,074,668 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005408001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005408002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013506487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013506488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013506489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01066418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01188029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000005627 ⟹ ENSCLAP00000005526

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955511	2,580,518 - 2,588,753 (-)	Ensembl

RefSeq Acc Id:

XM_005408001 ⟹ XP_005408058

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955511	2,580,518 - 2,588,354 (-)	NCBI

Sequence:

show sequence

TCTAGGCCTGCCTGGACTACAAAGCGAGAGCCTGGTTCAAAACAACGGGAGGGTCACACCTCCT
TCCCACTGAGCTGGGCATTTTGCTGGGGTCTTTTCCTCCATAGATCTCTGGAGCTGTACAAGCA
CACAGCCGCGGTCACCCAGCCCGAGGTGCGGCCCGCAGACCGCCTCTGGCCCCGCAGCTGTCCG
CGCTCGGCAGCCCCGGCCCCGCGCCCCCGGCCACCCCCTCCCCAGCCGCAGGAGCCGAGCGCGA
GGAGCCCAGCGGGCGCGGAGACCGCGAGCTCGAGAGCGCTGGCCGGAGCTCTCCGCAGCCGACC
TCAAGGTGACTCCGCTTCTCCCCACTTCTTGTCTGGGGGGGCCCTGGCTGGGAGCCCCCCGCGG
CTCTCCCGCCCTGAAACACGGCTCTAGCCAACCTGCTTCGCTGCTTCACCTGCGACCGGCTCTG
CGGGGGCTGCACGGCGCCGGCCCCTCCGGCCCGCCAGGGCATCGTGCTGCAGCCCGTCATGCCC
AGCTGCAACCCAGGCCCGGCCCCTGCCTGCCTGCCCGCCAAGACCTTCCGCAGCTACCTGCCGC
GCTGCCACCGCACCTACAGCTGCGTCCACTGCCGCGCCCACCTGGCCAAGCAGGATGAGCTCAT
CTCCAAGTCCTTCCAAGGGAGCCATGGCCGAGCCTACCTGTTTAACTCCGTGGTCAACGTGGGC
TGTGGGCCGGCTGAACAGCGCCTGCTGCTCACCGGGCTGCACTCCGTGGCTGACATCTTCTGTG
AGAGCTGCAAGACCACGCTGGGCTGGAAATACGAGCAAGCTTTCGAGACCAGCCAGAAGTACAA
GGAGGGGAAGTACATCATCGAGATGTCACACATGGTGAAGGACGACGGCTGGGACTGAGGGCTC
AGGCCGGCTGCGCCCCTCGCATGCCCCACCCTCCCACGCCTGCCCCAGCCCTGCCACGAGGTCC
ATACCAGCATGTGTACTGCCCACCCGCCCGCCCACCCGGACCGGCTCCACCTGCCTCCCTGCCC
TCACCGCGCTCCAGGCAGCAGGGGTCTGGGGGACCCTGGGGTGTTGAAGGCCCAGGGGCGGCAG
CAGCAGTTGGTAGCACCAGAAGCGGGGGTGTGGGGGCCGTGTCCTGTGCCCTGAGGTCCAGGAT
GCAGATGGCAGGGCGAGGACTTGGACAGGGGACCAGGGGAGGAGCCGGACGCGGCCCATCTTGT
TTTGAGCACACACGGAGGTGCGGGGCCTGGCAGATCCTCAGCCACAGGATAGCAGAGGCCAGGC
TGGGCTCAGGGAGCCCTGGCCTCGGACGCCAGTCTGAGGGTGGGGAAAGGACTCGGGCCGAGGG
GAACCCCAAGTCCAGGCCCCAGGCAGCAGCTGCGGGGCACACATCACCCCGCTGTTTACCTTGG
CACGGGAGGGGTACTTTGAGTTTCTAGCCCTTGCCAGTGGCAGGGTGGAGGGAACGCAGCACCG
CCCAGCCCCACCCCAGCTGGCCGGGCCTGAGCAAAGGAGCAGTCCTTGCAGCCTCTGTCCAGGG
CCCGGCCACTGCTCCCTGCGGCCCGGGCCCCTGGAGGGCAGCTGGACCACCAGGGCCGCGGGGC
TCCCGTGGCTGCCACCAGCGAAAGAAACTTTTCTTTGATACATAAAGTGTTTGGGTCTATTTTT
AATAAAACGGGGGAAAGCCACTGCGA

hide sequence

RefSeq Acc Id:

XM_005408002 ⟹ XP_005408059

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955511	2,580,518 - 2,588,753 (-)	NCBI

Sequence:

show sequence

GGCCGGGCGGCTGCGGGGCCGGACAGGTCTGAGTCTCGCTCTCCTGGCAGAAACACACAGGCGT
GATCAGCTCGGACTCGCGGGGCACAGCTTGCCTAAACCCCAGGCCAGCAAGTGGAGGAAATTAG
CAAAACCCCGTTTTGGCGCGAAGAGACCAAACGGTTGGAAAAGTGGAGGAAAACAAGCCACGCC
AGGCTGACAGGCTCTGCCTGACACTGTTTGGTGTGCAGGAGGCATTTAGAAAGCTTTCTTTCGC
AAAGTAGTAAAGGTCCAGTGTTTCTTCCGGCTCTTAATCACAAGCCGGACTCGGTGGTGCGCAC
GCCAGTGATACCAGGACTCAGGAGGCTGAGGCAGGAGGATCGCCACGAGCTCGAGGCCAGCCTG
GGCTACACACACACAGCCGCGGTCACCCAGCCCGAGGTGCGGCCCGCAGACCGCCTCTGGCCCC
GCAGCTGTCCGCGCTCGGCAGCCCCGGCCCCGCGCCCCCGGCCACCCCCTCCCCAGCCGCAGGA
GCCGAGCGCGAGGAGCCCAGCGGGCGCGGAGACCGCGAGCTCGAGAGCGCTGGCCGGAGCTCTC
CGCAGCCGACCTCAAGGTGACTCCGCTTCTCCCCACTTCTTGTCTGGGGGGGCCCTGGCTGGGA
GCCCCCCGCGGCTCTCCCGCCCTGAAACACGGCTCTAGCCAACCTGCTTCGCTGCTTCACCTGC
GACCGGCTCTGCGGGGGCTGCACGGCGCCGGCCCCTCCGGCCCGCCAGGGCATCGTGCTGCAGC
CCGTCATGCCCAGCTGCAACCCAGGCCCGGCCCCTGCCTGCCTGCCCGCCAAGACCTTCCGCAG
CTACCTGCCGCGCTGCCACCGCACCTACAGCTGCGTCCACTGCCGCGCCCACCTGGCCAAGCAG
GATGAGCTCATCTCCAAGTCCTTCCAAGGGAGCCATGGCCGAGCCTACCTGTTTAACTCCGTGG
TCAACGTGGGCTGTGGGCCGGCTGAACAGCGCCTGCTGCTCACCGGGCTGCACTCCGTGGCTGA
CATCTTCTGTGAGAGCTGCAAGACCACGCTGGGCTGGAAATACGAGCAAGCTTTCGAGACCAGC
CAGAAGTACAAGGAGGGGAAGTACATCATCGAGATGTCACACATGGTGAAGGACGACGGCTGGG
ACTGAGGGCTCAGGCCGGCTGCGCCCCTCGCATGCCCCACCCTCCCACGCCTGCCCCAGCCCTG
CCACGAGGTCCATACCAGCATGTGTACTGCCCACCCGCCCGCCCACCCGGACCGGCTCCACCTG
CCTCCCTGCCCTCACCGCGCTCCAGGCAGCAGGGGTCTGGGGGACCCTGGGGTGTTGAAGGCCC
AGGGGCGGCAGCAGCAGTTGGTAGCACCAGAAGCGGGGGTGTGGGGGCCGTGTCCTGTGCCCTG
AGGTCCAGGATGCAGATGGCAGGGCGAGGACTTGGACAGGGGACCAGGGGAGGAGCCGGACGCG
GCCCATCTTGTTTTGAGCACACACGGAGGTGCGGGGCCTGGCAGATCCTCAGCCACAGGATAGC
AGAGGCCAGGCTGGGCTCAGGGAGCCCTGGCCTCGGACGCCAGTCTGAGGGTGGGGAAAGGACT
CGGGCCGAGGGGAACCCCAAGTCCAGGCCCCAGGCAGCAGCTGCGGGGCACACATCACCCCGCT
GTTTACCTTGGCACGGGAGGGGTACTTTGAGTTTCTAGCCCTTGCCAGTGGCAGGGTGGAGGGA
ACGCAGCACCGCCCAGCCCCACCCCAGCTGGCCGGGCCTGAGCAAAGGAGCAGTCCTTGCAGCC
TCTGTCCAGGGCCCGGCCACTGCTCCCTGCGGCCCGGGCCCCTGGAGGGCAGCTGGACCACCAG
GGCCGCGGGGCTCCCGTGGCTGCCACCAGCGAAAGAAACTTTTCTTTGATACATAAAGTGTTTG
GGTCTATTTTTAATAAAACGGGGGAAAGCCACTGCGA

hide sequence

RefSeq Acc Id:

XM_013506487 ⟹ XP_013361941

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955511	2,583,350 - 2,588,218 (-)	NCBI

Sequence:

show sequence

TGCCCCTCAGCCTGGTGTGCAAGCCTCTTTACACAAGCGTGGGCCTTGGAATCCCGGGTTGCTC
TCTCGCTGTGTGACTGGGCAAATCACAGGCTTCCTGTGGCAGACGTTTCTGGCCTGTAAAATGG
TGATAATAACAGTACCCAGCCTCTTAAAATTGTGTTGAAGATTGGACAGAGTGGGGCGCCACGT
AGCCGCGCTGAGCGCGGAGTCTGTAACAGAGAAGGTCCGATCTGATGTTAGCTTTTACGTTTTG
ATGATAGGGCGGGGGCGCTATAATAATGTCTAGTTATACGGCACTTTACATTTTTCAAAGTCCT
TCCAGGGAGCTTGTTTCACAGCCGCTGCACGGTCATTATTATCTCCAATTTCACTTGGGGGAGG
AGACGGAGACAGCTCTGGCAGGAGGCTGGGCCCTTGGTGGAGAGAGATGCTGAGTCAGGACCAG
GTACTGTGCGATGGCTGCACAGGTGTGAGGTCCTTCACCCTGCAAGAACCCCCCGCACACACAG
CCGCGGTCACCCAGCCCGAGGTGCGGCCCGCAGACCGCCTCTGGCCCCGCAGCTGTCCGCGCTC
GGCAGCCCCGGCCCCGCGCCCCCGGCCACCCCCTCCCCAGCCGCAGGAGCCGAGCGCGAGGAGC
CCAGCGGGCGCGGAGACCGCGAGCTCGAGAGCGCTGGCCGGAGCTCTCCGCAGCCGACCTCAAG
GTGAGGGGCCAGCCCTTCTCCAGACGGGTCCCCCTGCCGTGTCCCCTCCCCGCGTGCCGCGTCC
CCGCCCTGGCACAAGCATCGCTCACCGCCTTCGCCCTGCCCCCGCCCCGCGGCCTGGCTGCGCT
CGCTCCTCCGTCCCTCTCCAAGCTGCGACTCCCGCACTTATTTCCCGGCAACTTTGGCTGCGGC
ATCGGCGTCACTGTGCATTGCACGGCTGCTGTGCGGACCCCCGGACCTGGCCTGGAAGCTGGCG
GCGCCGACCCTTGGACCCCTGAATCCCAAGAGCGCCAGCCGGGAGGGGGGGGGTCCCGAGCAGA
CAGCATCCCCCAGCAGGTGTCCCCTCCCCCGCCCCCTGCTTCCTGAGAGGCACGCGATTCCGCT
CGCACCTGGTTTCTCAGCCTCCGCTGCCGTCAGCTGCCACCCCCTCCCCGCCCCCAAGGCCCAG
CGCGGCGCACCTGGCACATCGGGGACGCAGCCTCCTCCGGCCCCAGCTGGCCTTTGTTTGCCCA
GCATCGGCTGACCTGCCGCTCCCTGGGAGGGCACAAGGGGAGAAGCCGTGACCCCGGTGTCCCC
GAGGGATTTGCTAGCCTCCAGGCAGCCTCCCCGGGCTGGGTGCAGGGAAGGAGGTGTGCCGGTT
GGCCCGAGCTTGGGGACCAAGGCCAAGGCGGGCCTGACTCCTGAGCTGGCCCCTCACCCCCCAG
CCTCCAAGGAAGCGTTTCAAGGTGGCCGTGGTCAGAGGGGAACTCGGGCAAAGTTGACAGCAGC
CACTGGAGGGGGTCTACCTGAGAACAGGTAGCCACGAGGGCCACCAAAAGCCAGTGTCACCCAG
ATTCCGCCCAGGGTGTCTTCCGGGCCCTGGTGTCCATGGAGGGTTCTGGGCTCGGCTGCTGGGT
GGCCCTCAGAGAGAGCAGCGCGGCGGGGGCCTGTGGCCACCGCAGAGGACAGGACAGGGACAGC
CAGTCTGACTGGCAGTTGATGCCACTGTGCCTCGCTGCTCTGGCGCTGCCGGGGCACAAACGCG
GGCTGAGCTGCCTGCGGCTGCCCACCAAGGCCAGGGCAGCACCGCACCTGCTTATCAGGGCGGA
CAGGGGCCACCTCCCTTCTTATCCTCTGCTCCAGCAGCTCGGCCACTCCGGGGCTGGCGTGGGG
CAGCGCTAGTTTCATCTTCAGTTGCCCTGAGTCACTGCTGCTTGTGCCTGGCCCAGGGAGAAGG
AAGCAGTCTTGTACCCCAAGCAACATCTTTATTTATATATTGTTTTGAGGTACGGGGGGGGGGC
GGACCCCAGGCCTTTGCACTGAGCTACATCCC

hide sequence

RefSeq Acc Id:

XM_013506488 ⟹ XP_013361942

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955511	2,580,518 - 2,588,753 (-)	NCBI

Sequence:

show sequence

GGCCGGGCGGCTGCGGGGCCGGACAGGTCTGAGTCTCGCTCTCCTGGCAGAAACACACAGGCGT
GATCAGCTCGGACTCGCGGGGCACAGCTTGCCTAAACCCCAGGCCAGCAAGTGGAGGAAATTAG
CAAAACCCCGTTTTGGCGCGAAGAGACCAAACGGTTGGAAAAGTGGAGGAAAACAAGCCACGCC
AGGCTGACAGGCTCTGCCTGACACTGTTTGGTGTGCAGGAGGCATTTAGAAAGCTTTCTTTCGC
AAAGTAGTAAAGGTCCAGTGTTTCTTCCGGCTCTTAATCACAAGCCGGACTCGGTGGTGCGCAC
GCCAGTGATACCAGGACTCAGGAGGCTGAGGCAGGAGGATCGCCACGAGCTCGAGGCCAGCCTG
GGCTACACACACACAGCCGCGGTCACCCAGCCCGAGGTGCGGCCCGCAGACCGCCTCTGGCCCC
GCAGCTGTCCGCGCTCGGCAGCCCCGGCCCCGCGCCCCCGGCCACCCCCTCCCCAGCCGCAGGA
GCCGAGCGCGAGGAGCCCAGCGGGCGCGGAGACCGCGAGCTCGAGAGCGCTGGCCGGAGCTCTC
CGCAGCCGACCTCAAGGCCCTCTCCGCAGGTGACTCCGCTTCTCCCCACTTCTTGTCTGGGGGG
GCCCTGGCTGGGAGCCCCCCGCGGCTCTCCCGCCCTGAAACACGGCTCTAGCCAACCTGCTTCG
CTGCTTCACCTGCGACCGGCTCTGCGGGGGCTGCACGGCGCCGGCCCCTCCGGCCCGCCAGGGC
ATCGTGCTGCAGCCCGTCATGCCCAGCTGCAACCCAGGCCCGGCCCCTGCCTGCCTGCCCGCCA
AGACCTTCCGCAGCTACCTGCCGCGCTGCCACCGCACCTACAGCTGCGTCCACTGCCGCGCCCA
CCTGGCCAAGCAGGATGAGCTCATCTCCAAGTCCTTCCAAGGGAGCCATGGCCGAGCCTACCTG
TTTAACTCCGTGGTCAACGTGGGCTGTGGGCCGGCTGAACAGCGCCTGCTGCTCACCGGGCTGC
ACTCCGTGGCTGACATCTTCTGTGAGAGCTGCAAGACCACGCTGGGCTGGAAATACGAGCAAGC
TTTCGAGACCAGCCAGAAGTACAAGGAGGGGAAGTACATCATCGAGATGTCACACATGGTGAAG
GACGACGGCTGGGACTGAGGGCTCAGGCCGGCTGCGCCCCTCGCATGCCCCACCCTCCCACGCC
TGCCCCAGCCCTGCCACGAGGTCCATACCAGCATGTGTACTGCCCACCCGCCCGCCCACCCGGA
CCGGCTCCACCTGCCTCCCTGCCCTCACCGCGCTCCAGGCAGCAGGGGTCTGGGGGACCCTGGG
GTGTTGAAGGCCCAGGGGCGGCAGCAGCAGTTGGTAGCACCAGAAGCGGGGGTGTGGGGGCCGT
GTCCTGTGCCCTGAGGTCCAGGATGCAGATGGCAGGGCGAGGACTTGGACAGGGGACCAGGGGA
GGAGCCGGACGCGGCCCATCTTGTTTTGAGCACACACGGAGGTGCGGGGCCTGGCAGATCCTCA
GCCACAGGATAGCAGAGGCCAGGCTGGGCTCAGGGAGCCCTGGCCTCGGACGCCAGTCTGAGGG
TGGGGAAAGGACTCGGGCCGAGGGGAACCCCAAGTCCAGGCCCCAGGCAGCAGCTGCGGGGCAC
ACATCACCCCGCTGTTTACCTTGGCACGGGAGGGGTACTTTGAGTTTCTAGCCCTTGCCAGTGG
CAGGGTGGAGGGAACGCAGCACCGCCCAGCCCCACCCCAGCTGGCCGGGCCTGAGCAAAGGAGC
AGTCCTTGCAGCCTCTGTCCAGGGCCCGGCCACTGCTCCCTGCGGCCCGGGCCCCTGGAGGGCA
GCTGGACCACCAGGGCCGCGGGGCTCCCGTGGCTGCCACCAGCGAAAGAAACTTTTCTTTGATA
CATAAAGTGTTTGGGTCTATTTTTAATAAAACGGGGGAAAGCCACTGCGA

hide sequence

RefSeq Acc Id:

XM_013506489 ⟹ XP_013361943

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955511	2,582,345 - 2,588,218 (-)	NCBI

Sequence:

show sequence

TGCCCCTCAGCCTGGTGTGCAAGCCTCTTTACACAAGCGTGGGCCTTGGAATCCCGGGTTGCTC
TCTCGCTGTGTGACTGGGCAAATCACAGGCTTCCTGTGGCAGACGTTTCTGGCCTGTAAAATGG
TGATAATAACAGTACCCAGCCTCTTAAAATTGTGTTGAAGATTGGACAGAGTGGGGCGCCACGT
AGCCGCGCTGAGCGCGGAGTCTGTAACAGAGAAGGTCCGATCTGATGTTAGCTTTTACGTTTTG
ATGATAGGGCGGGGGCGCTATAATAATGTCTAGTTATACGGCACTTTACATTTTTCAAAGTCCT
TCCAGGGAGCTTGTTTCACAGCCGCTGCACGGTCATTATTATCTCCAATTTCACTTGGGGGAGG
AGACGGAGACAGCTCTGGCAGGAGGCTGGGCCCTTGGTGGAGAGAGATGCTGAGTCAGGACCAG
GTACTGTGCGATGGCTGCACAGGTGTGAGGTCCTTCACCCTGCAAGAACCCCCCGCACACACAG
CCGCGGTCACCCAGCCCGAGGTGCGGCCCGCAGACCGCCTCTGGCCCCGCAGCTGTCCGCGCTC
GGCAGCCCCGGCCCCGCGCCCCCGGCCACCCCCTCCCCAGCCGCAGGAGCCGAGCGCGAGGAGC
CCAGCGGGCGCGGAGACCGCGAGCTCGAGAGCGCTGGCCGGAGCTCTCCGCAGCCGACCTCAAG
GTGACTCCGCTTCTCCCCACTTCTTGTCTGGGGGGGCCCTGGCTGGGAGCCCCCCGCGGCTCTC
CCGCCCTGAAACACGGCTCTAGCCAACCTGCTTCGCTGCTTCACCTGCGACCGGCTCTGCGGGG
GCTGCACGGCGCCGGCCCCTCCGGCCCGCCAGGGCATCGTGCTGCAGCCCGTCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005408058	(Get FASTA)	NCBI Sequence Viewer
	XP_005408059	(Get FASTA)	NCBI Sequence Viewer
	XP_013361941	(Get FASTA)	NCBI Sequence Viewer
	XP_013361942	(Get FASTA)	NCBI Sequence Viewer
	XP_013361943	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005526
	ENSCLAP00000005526.1

RefSeq Acc Id:	XP_005408059 ⟸ XM_005408002
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UYD6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSCNPGPAPACLPAKTFRSYLPRCHRTYSCVHCRAHLAKQDELISKSFQGSHGRAYLFNSVVN VGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIEMSHMVKDDGWD hide sequence

RefSeq Acc Id:	XP_005408058 ⟸ XM_005408001
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UYD6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSCNPGPAPACLPAKTFRSYLPRCHRTYSCVHCRAHLAKQDELISKSFQGSHGRAYLFNSVVN VGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIEMSHMVKDDGWD hide sequence

RefSeq Acc Id:	XP_013361942 ⟸ XM_013506488
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UYD6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSCNPGPAPACLPAKTFRSYLPRCHRTYSCVHCRAHLAKQDELISKSFQGSHGRAYLFNSVVN VGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIEMSHMVKDDGWD hide sequence

RefSeq Acc Id:	XP_013361943 ⟸ XM_013506489
- Peptide Label:	isoform X3
- Sequence:	show sequence MLSQDQVLCDGCTGVRSFTLQEPPAHTAAVTQPEVRPADRLWPRSCPRSAAPAPRPRPPPPQPQ EPSARSPAGAETASSRALAGALRSRPQGDSASPHFLSGGALAGSPPRLSRPETRL hide sequence

RefSeq Acc Id:	XP_013361941 ⟸ XM_013506487
- Peptide Label:	isoform X1
- Sequence:	show sequence MLSQDQVLCDGCTGVRSFTLQEPPAHTAAVTQPEVRPADRLWPRSCPRSAAPAPRPRPPPPQPQ EPSARSPAGAETASSRALAGALRSRPQGEGPALLQTGPPAVSPPRVPRPRPGTSIAHRLRPAPA PRPGCARSSVPLQAATPALISRQLWLRHRRHCALHGCCADPRTWPGSWRRRPLDP hide sequence

Ensembl Acc Id:

ENSCLAP00000005526 ⟸ ENSCLAT00000005627

Protein Domains

Yippee

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003918	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000005627	ENTREZGENE
	ENSCLAT00000005627.1	UniProtKB/TrEMBL
InterPro	Yippee	UniProtKB/TrEMBL
	Yippee/Mis18/Cereblon	UniProtKB/TrEMBL
	Yippee_fam	UniProtKB/TrEMBL
NCBI Gene	Ypel4	ENTREZGENE
PANTHER	PROTEIN YIPPEE-LIKE 4	UniProtKB/TrEMBL
	PTHR13848	UniProtKB/TrEMBL
Pfam	Yippee-Mis18	UniProtKB/TrEMBL
PROSITE	YIPPEE	UniProtKB/TrEMBL
UniProt	A0A8C2UYD6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-16	Ypel4	yippee like 4		yippee-like 4	Symbol and/or name change	5135510	APPROVED
2015-08-25	Ypel4	yippee-like 4		yippee-like 4 (Drosophila)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar