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Gene: Nol11 (nucleolar protein 11) Chinchilla lanigera

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Symbol:

Nol11

Name:

nucleolar protein 11

RGD ID:

8981626

Description:

INVOLVED IN maturation of SSU-rRNA (ortholog); positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN nucleolus (ortholog); t-UTP complex (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NOL11 (nucleolar protein 11)	NCBI	Ortholog
Mus musculus (house mouse):	Nol11 (nucleolar protein 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Nol11 (nucleolar protein 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NOL11 (nucleolar protein 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NOL11 (nucleolar protein 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nol11 (nucleolar protein 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NOL11 (nucleolar protein 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NOL11 (nucleolar protein 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nol11 (nucleolar protein 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955478	6,863,635 - 6,892,743 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955478	6,863,203 - 6,891,549 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Developmental Disabilities (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

maturation of SSU-rRNA (ISO)

positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ISO)

Cellular Component

nucleolus (ISO)

t-UTP complex (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Nol11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955478	6,863,635 - 6,892,743 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955478	6,863,203 - 6,891,549 (+)	NCBI	ChiLan1.0	ChiLan1.0

NOL11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	67,717,936 - 67,744,531 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	67,717,931 - 67,744,531 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	65,714,052 - 65,740,647 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	63,144,523 - 63,170,728 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	62,286,138 - 62,312,332 (+)	NCBI		Celera
Cytogenetic Map	17	q24.2	NCBI
HuRef	17	61,098,786 - 61,124,685 (+)	NCBI		HuRef
CHM1_1	17	65,777,968 - 65,803,880 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	68,593,485 - 68,619,780 (+)	NCBI		T2T-CHM13v2.0

Nol11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	107,057,477 - 107,080,207 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	107,057,489 - 107,080,207 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	107,166,651 - 107,189,381 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	107,166,663 - 107,189,381 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	107,027,974 - 107,050,695 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	106,982,750 - 107,005,350 (-)	NCBI		MGSCv36	mm8
Celera	11	118,897,960 - 118,921,315 (-)	NCBI		Celera
Cytogenetic Map	11	E1	NCBI
cM Map	11	70.19	NCBI

Nol11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	92,621,482 - 92,641,394 (-)	NCBI		GRCr8
mRatBN7.2	10	92,119,000 - 92,141,688 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	92,121,833 - 92,141,677 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	97,180,103 - 97,200,063 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	96,643,105 - 96,663,065 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	92,044,582 - 92,064,556 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	95,388,223 - 95,408,053 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	95,388,888 - 95,407,997 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	95,127,723 - 95,146,294 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	96,556,787 - 96,569,562 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	90,789,487 - 90,809,050 (-)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

NOL11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	83,741,681 - 83,767,848 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	88,563,056 - 88,589,027 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	61,650,662 - 61,676,657 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	66,849,998 - 66,875,775 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	66,849,998 - 66,875,775 (+)	Ensembl	panpan1.1		panPan2

NOL11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	12,817,669 - 12,845,632 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	12,818,714 - 12,846,484 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	13,712,536 - 13,740,307 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	14,475,714 - 14,503,246 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	14,476,368 - 14,503,197 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	13,428,748 - 13,456,548 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	14,082,060 - 14,109,841 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	14,080,318 - 14,108,271 (+)	NCBI		UU_Cfam_GSD_1.0

Nol11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	13,719,511 - 13,746,259 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936541	5,448,658 - 5,475,020 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936541	5,448,346 - 5,475,064 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NOL11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	14,035,689 - 14,058,414 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	14,035,649 - 14,058,421 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	14,570,768 - 14,593,278 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NOL11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	53,720,229 - 53,747,715 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	53,720,571 - 53,747,658 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	24,661,026 - 24,688,480 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nol11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624870	707,020 - 732,667 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624870	706,755 - 732,541 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005402157	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013503234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01055921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01055922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01055923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01055924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01055925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01130564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000003933 ⟹ ENSCLAP00000003857

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955478	6,863,635 - 6,892,743 (+)	Ensembl

RefSeq Acc Id:

XM_005402157 ⟹ XP_005402214

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955478	6,863,206 - 6,891,549 (+)	NCBI

Sequence:

show sequence

AGTAGGTCACTAAATTGCCCGGGTTGGGCTCAAACTTTCAAGCCTCTGCCCCAATTTTCCACAA
TGCTGAGATTACAGGCCCCTAAGAGGGTTTTGTTTTTCATTGTTGTTTTGTTTTTCAATTCATT
TATATTCGGCCACTCCTTAAACTCTTCAAATCTCCACAAACAGTCCGGGGGTACAGCAGCTCTC
GTGGAACACGTAGGACTTCCCGGGACCTGGACCACATCCGGGACTTGCACATGCGCGTCCTCGA
GAGGAGGGGTCTAGACGCACGGTCCAGGCCCCGCCCAGCCGGCAACAGGCGGCTCCGCGCGACC
CTTTGGACCGGAAGGGGTCGCAGCGCCCTCCCGTTACCCATCTCGCTATCGCGAGAGAAAGCGC
GAGGCCTGCCGGGACTGTGCGCGACTGGCCATAGGCGTGCCCAAAATGGCAGCCCTGGAAGAAG
AGTTCACGTTGTCTGCGGTAACCTTGGGCGCGAGGCCGGACGGACTCCTAGGTGTAGAACAGAC
CGACAGAACAGACCATTTCCTAGTGACGGACAGGAGCAGAACTGTCATCCTCTATAAGGTTTCT
GATCAGAAACCCTTGGGGAGCTGGTCAGTGAAACAAGGTCAAATTATAACATGTCCAGCTGTGT
GCAACTTTCAAACTGGAGAGCATATTGTTGTACATGATGATAAGGTTTTGAGAATATGGAACAA
TGAAGATGTAAACTTGGATAAAGTATTTAAAGCTACATTGTCAGCTGAGGTTCATAGGGTACAC
TCGGTGCAAGGAGCAGAGCCCGTGGTGCTGTTCAGGGGAGGCGCGGCTCGCGGGTTGGAGGCTT
TGCTCGCGGAGCCCCAGCAGAAGATTGAAACCGTCCTCTCCGATGGAGAAGTGATTAAGTGGAC
AAAGTTTTTCGTGGTATTTAGGCATCCTGTCATAGTTTTTATTACTGAAAAAGATGGAAATCAT
TTTGCTTATGTACAGATGCTCCACTCACGAAACTTAAGCAAATACACTCTCCTGCTTGAACAAG
AAGAAAAATCTGTTACCCGGAGTTTTACTGCGTCTGTGGATCGGAAGTTTATCTCTTTAATGAC
ATTAAGCTCCGATGGATGTGTGTACGAAACCTTGATCCCAATATATCCGAGCGACACAGAAAAG
AACCAGAGACTGGTCAGATCACCGTTGCTCAAGGCTGTCGTGTCTGGTGCTGCTCCCAATGGTG
TGACCCTCGCCGCCCTGGACCCAGATCACGTAGCAGTCCTCGGAGCGCCACTGCCGTCGTCTAA
GGAGTGCCTCTCCATATGGAACACAAAATTTCAAACACTACAGACTTCAAAAGAGTTACCGCAA
GGGACCAGTGGTCAGCTGTGGTGTTACGGAGAACATCTGTTCCTGCTCCATGGGAAATGCCTGA
CGGTGGTTCCATGCAGGTGCGGTGCGTCGTCGTTAGCTGGTGCCCTTGGGAAGCTCAGGCGTGC
TCAGGACCCAGGCTCTCAAACCATGCCCCACTTTGTAAACTGGGAAGTAGCTCAGGGATGTGAA
CCCGGAGCCCAGAAATCAGAGCAGTTGAGAAGAATTCTAAGAAGAAAAAAGAGTGAAGTAAGTT
TACAGCCAGAAGTTCCAGCATCTGAACAACTTTTATCGACTATAAAGAATGGTTCGGAAAAGCA
CATTGAGGTGGAGCTACGTAAATTCTTGGCTAAGTGGACCCCTGACTCTCACGCGGTGCTCGGG
GACGTCGTGGCGGCGCTCCTGGGAAGAGGTGAAGCAGAGCCGTCCTTTTACCCCCGGAGCTGCC
TGATGCAGCTGCTGCAGACGCACGCGCTCTCCCACAGCTTGTGCCCTGGCCTGATGGACACTGC
GTTAGCAAAAGCAGACGTGCAGATGCTGCAGCTCTGCCTGCGGCACTTCCCCGATGTTCCTGAG
TCTCTTACGTGTGCCTGCTTAAAAATTTTCCTGAGCATTGGGGATGACAGCCTTCAGGGAGCCC
ACGTCAGCATGGAGTCGGTGTGCGAGCACAGCAGCTCCGAGCAGGACGAGAGCACGGAGGAGCA
GCCTGAGATTCTCCGCAATGGCTTCAGCCCCGGAGACAGCAACTGCGGCACCTGTGAGCAGGAG
CTCCGTGAGGAGCCTCAGGGGCCGGCAGCAGAGGCCGCCTCGTGCCCGGTGACTCCCAAGAGAG
CCGCTCTCCTAAATGGCATTCTCGGTTCAGCATACAGCGAGACGTTCCTCCTGCCTCACCTGAA
GGACATCCCCGCGCAGCATGTCACGCTATTTCTGCAGTATCTGTACTTCCTCTATCTGAAGTGT
AGTGAGAATGCTACTATGACTCTTCCTGGAATGCACCCTCCAACTCTGAGCCAGATTATGGATT
GGATATGCCTACTTCTAGATGCTAATTTTACTGTTGTCTTAATGATACCGGAAGCAAAAAGGCT
ACTGATAAATCTTTACAAGTTCGTGAAGTCCCAGATAAGTGTTTATTCTGAGCTCAACAAGATT
GAAGTAAGTTTTCGGGAGCTACAGAAATTAAATCAAGAAAAGAACAATAGAGGATTGTATTCAA
TTGAAGTGCTAGAACTCTTCTGACGTTACTAGTATTTCCTTCAGAGACATTCAGAGACATTTGG
TGAAACCTTTACGTGGAACCCCCCACCCTGTCCAGGCAAGGGTGGTTTCGAGTGTGACCATCTC
CCAGCGTGCCAGGAAAGCGCCAGTGCGCTCCCGGACCGTCGCACGCGGGTGTCCTCCTGGGACC
GCAGGCCGATCGGCGCCTGTCCTGGACGGGACACTGCTCACAAGAGGCTAGGAACTTTCTAAAA
TATGTGACTGAGCTGATTTTAAGGAAACGTACTTGTGTATTGATAAAAGTCTAATTTCTTACCA
TGTGTTTCGAATAGTTTTTCTTTCAATAAAAAATCACCGTTGAA

hide sequence

RefSeq Acc Id:

XM_013503234 ⟹ XP_013358688

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955478	6,863,203 - 6,891,549 (+)	NCBI

Sequence:

show sequence

CTCAGTAGGTCACTAAATTGCCCGGGTTGGGCTCAAACTTTCAAGCCTCTGCCCCAATTTTCCA
CAATGCTGAGATTACAGGCCCCTAAGAGGGTTTTGTTTTTCATTGTTGTTTTGTTTTTCAATTC
ATTTATATTCGGCCACTCCTTAAACTCTTCAAATCTCCACAAACAGTCCGGGGGTACAGCAGCT
CTCGTGGAACACGTAGGACTTCCCGGGACCTGGACCACATCCGGGACTTGCACATGCGCGTCCT
CGAGAGGAGGGGTCTAGACGCACGGTCCAGGCCCCGCCCAGCCGGCAACAGGCGGCTCCGCGCG
ACCCTTTGGACCGGAAGGGGTCGCAGCGCCCTCCCGTTACCCATCTCGCTATCGCGAGAGAAAG
CGCGAGGCCTGCCGGGACTGTGCGCGACTGGCCATAGGCGTGCCCAAAATGGCAGCCCTGGAAG
AAGAGTTCACGTTGTCTGCGGTAACCTTGGGCGCGAGGCCGGACGGACTCCTAGGTGTAGAACA
GACCGACAGAACAGACCATTTCCTAGTGACGGACAGGAGCAGAACTGTCATCCTCTATAAGGTT
TCTGATCAGAAACCCTTGGGGAGCTGGTCAGTGAAACAAGGTCAAATTATAACATGTCCAGCTG
TGTGCAACTTTCAAACTGGAGAGCATATTGTTGTACATGATGATAAGGTTTTGAGAATATGGAA
CAATGAAGATGTAAACTTGGATAAAGTATTTAAAGCTACATTGTCAGCTGAGGTTCATAGGGTA
CACTCGGTGCAAGGAGCAGAGCCCGTGGTGCTGTTCAGGGGAGGCGCGGCTCGCGGGTTGGAGG
CTTTGCTCGCGGAGCCCCAGCAGAAGATTGAAACCGTCCTCTCCGATGGAGAAGTGATTAAGTG
GACAAAGTTTTTCGTGGTATTTAGGCATCCTGTCATAGTTTTTATTACTGAAAAAGATGGAAAT
CATTTTGCTTATGTACAGATGCTCCACTCACGAAACTTAAGCAAATACACTCTCCTGCTTGAAC
AAGAAGAAAAATCTGTTACCCGGAGTTTTACTGCGTCTGTGGATCGGAAGTTTATCTCTTTAAT
GACATTAAGCTCCGATGGATGTGTGTACGAAACCTTGATCCCAATATATCCGAGCGACACAGAA
AAGAACCAGAGACTGGTCAGATCACCGTTGCTCAAGGCTGTCGTGTCTGGTGCTGCTCCCAATG
GTGTGACCCTCGCCGCCCTGGACCCAGATCACGTAGCAGTCCTCGGAGCGCCACTGCCGTCGTC
TAAGGAGTGCCTCTCCATATGGAACACAAAATTTCAAACACTACAGACTTCAAAAGAGTTACCG
CAAGGGACCAGTGGTCAGCTGTGGTGTTACGGAGAACATCTGTTCCTGCTCCATGGGAAATGCC
TGACGGTGGTTCCATGCAGGTGCGGTGCGTCGTCGTTAGCTGGTGCCCTTGGGAAGCTCAGGCG
TGCTCAGGACCCAGGCTCTCAAACCATGCCCCACTTTGTAAACTGGGAAGTAGCTCAGGGATGT
GAACCCGGAGCCCAGAAATCAGAGCAGTTGAGAAGAATTCTAAGAAGAAAAAAGAGTGAAGTAA
GTTTACAGCCAGAAGTTCCAGCATCTGAACAACTTTTATCGACTATAAAGAATGGTTCGGAAAA
GCACATTGAGGTGGAGCTACGTAAATTCTTGGCTAAGTGGACCCCTGACTCTCACGCGGTGCTC
GGGGACGTCGTGGCGGCGCTCCTGGGAAGAGGTGAAGCAGAGCCGTCCTTTTACCCCCGGAGCT
GCCTGATGCAGCTGCTGCAGACGCACGCGCTCTCCCACAGCTTGTGCCCTGGCCTGATGGACAC
TGCGTTAGCAAAAGCAGACGTGCAGATGCTGCAGCTCTGCCTGCGGCACTTCCCCGATGTTCCT
GAGTCTCTTACGTGTGCCTGCTTAAAAATTTTCCTGAGCATTGGGGATGACAGCCTTCAGGGAG
CCCACGTCAGCATGGAGTCGGTGTGCGAGCACAGCAGCTCCGAGCAGGACGAGAGCACGGAGGA
GCAGCCTGAGATTCTCCGCAATGGCTTCAGCCCCGGAGACAGCAACTGCGGCACCTGTGAGCAG
GAGCTCCGTGAGGAGCCTCAGGGGCCGGCAGCAGAGGCCGCCTCGTGCCCGGTGACTCCCAAGA
GAGCCGCTCTCCTAAATGGCATTCTCGGTTCAGCATACAGCGAGACGTTCCTCCTGCCTCACCT
GAAGGACATCCCCGCGCAGCATGTCACGATTATGGATTGGATATGCCTACTTCTAGATGCTAAT
TTTACTGTTGTCTTAATGATACCGGAAGCAAAAAGGCTACTGATAAATCTTTACAAGTTCGTGA
AGTCCCAGATAAGTGTTTATTCTGAGCTCAACAAGATTGAAGTAAGTTTTCGGGAGCTACAGAA
ATTAAATCAAGAAAAGAACAATAGAGGATTGTATTCAATTGAAGTGCTAGAACTCTTCTGACGT
TACTAGTATTTCCTTCAGAGACATTCAGAGACATTTGGTGAAACCTTTACGTGGAACCCCCCAC
CCTGTCCAGGCAAGGGTGGTTTCGAGTGTGACCATCTCCCAGCGTGCCAGGAAAGCGCCAGTGC
GCTCCCGGACCGTCGCACGCGGGTGTCCTCCTGGGACCGCAGGCCGATCGGCGCCTGTCCTGGA
CGGGACACTGCTCACAAGAGGCTAGGAACTTTCTAAAATATGTGACTGAGCTGATTTTAAGGAA
ACGTACTTGTGTATTGATAAAAGTCTAATTTCTTACCATGTGTTTCGAATAGTTTTTCTTTCAA
TAAAAAATCACCGTTGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005402214	(Get FASTA)	NCBI Sequence Viewer
	XP_013358688	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000003857
	ENSCLAP00000003857.1

RefSeq Acc Id:	XP_005402214 ⟸ XM_005402157
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2URZ4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAALEEEFTLSAVTLGARPDGLLGVEQTDRTDHFLVTDRSRTVILYKVSDQKPLGSWSVKQGQI ITCPAVCNFQTGEHIVVHDDKVLRIWNNEDVNLDKVFKATLSAEVHRVHSVQGAEPVVLFRGGA ARGLEALLAEPQQKIETVLSDGEVIKWTKFFVVFRHPVIVFITEKDGNHFAYVQMLHSRNLSKY TLLLEQEEKSVTRSFTASVDRKFISLMTLSSDGCVYETLIPIYPSDTEKNQRLVRSPLLKAVVS GAAPNGVTLAALDPDHVAVLGAPLPSSKECLSIWNTKFQTLQTSKELPQGTSGQLWCYGEHLFL LHGKCLTVVPCRCGASSLAGALGKLRRAQDPGSQTMPHFVNWEVAQGCEPGAQKSEQLRRILRR KKSEVSLQPEVPASEQLLSTIKNGSEKHIEVELRKFLAKWTPDSHAVLGDVVAALLGRGEAEPS FYPRSCLMQLLQTHALSHSLCPGLMDTALAKADVQMLQLCLRHFPDVPESLTCACLKIFLSIGD DSLQGAHVSMESVCEHSSSEQDESTEEQPEILRNGFSPGDSNCGTCEQELREEPQGPAAEAASC PVTPKRAALLNGILGSAYSETFLLPHLKDIPAQHVTLFLQYLYFLYLKCSENATMTLPGMHPPT LSQIMDWICLLLDANFTVVLMIPEAKRLLINLYKFVKSQISVYSELNKIEVSFRELQKLNQEKN NRGLYSIEVLELF hide sequence

RefSeq Acc Id:

XP_013358688 ⟸ XM_013503234

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAALEEEFTLSAVTLGARPDGLLGVEQTDRTDHFLVTDRSRTVILYKVSDQKPLGSWSVKQGQI
ITCPAVCNFQTGEHIVVHDDKVLRIWNNEDVNLDKVFKATLSAEVHRVHSVQGAEPVVLFRGGA
ARGLEALLAEPQQKIETVLSDGEVIKWTKFFVVFRHPVIVFITEKDGNHFAYVQMLHSRNLSKY
TLLLEQEEKSVTRSFTASVDRKFISLMTLSSDGCVYETLIPIYPSDTEKNQRLVRSPLLKAVVS
GAAPNGVTLAALDPDHVAVLGAPLPSSKECLSIWNTKFQTLQTSKELPQGTSGQLWCYGEHLFL
LHGKCLTVVPCRCGASSLAGALGKLRRAQDPGSQTMPHFVNWEVAQGCEPGAQKSEQLRRILRR
KKSEVSLQPEVPASEQLLSTIKNGSEKHIEVELRKFLAKWTPDSHAVLGDVVAALLGRGEAEPS
FYPRSCLMQLLQTHALSHSLCPGLMDTALAKADVQMLQLCLRHFPDVPESLTCACLKIFLSIGD
DSLQGAHVSMESVCEHSSSEQDESTEEQPEILRNGFSPGDSNCGTCEQELREEPQGPAAEAASC
PVTPKRAALLNGILGSAYSETFLLPHLKDIPAQHVTIMDWICLLLDANFTVVLMIPEAKRLLIN
LYKFVKSQISVYSELNKIEVSFRELQKLNQEKNNRGLYSIEVLELF

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Ensembl Acc Id:

ENSCLAP00000003857 ⟸ ENSCLAT00000003933

Protein Domains

Nucleolar protein 11 C-terminal Nucleolar protein 11 N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000002744	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000003933	ENTREZGENE
	ENSCLAT00000003933.1	UniProtKB/TrEMBL
InterPro	NOL11	UniProtKB/TrEMBL
	Nol11_C	UniProtKB/TrEMBL
	NUC205	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
NCBI Gene	Nol11	ENTREZGENE
PANTHER	NUCLEOLAR PROTEIN 11	UniProtKB/TrEMBL
	PTHR15633	UniProtKB/TrEMBL
Pfam	Nol11_C	UniProtKB/TrEMBL
	NUC205	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50978	UniProtKB/TrEMBL
UniProt	A0A8C2URZ4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar