Hbegf (heparin binding EGF like growth factor) - Rat Genome Database

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Gene: Hbegf (heparin binding EGF like growth factor) Chinchilla lanigera
Analyze
Symbol: Hbegf
Name: heparin binding EGF like growth factor
RGD ID: 8975288
Description: ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); cell migration (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); autosomal dominant non-syndromic intellectual disability 31 (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); integral component of plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: heparin-binding EGF-like growth factor; proheparin-binding EGF-like growth factor
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955418309,096 - 321,387 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955418259,860 - 321,340 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Hbegf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955418309,096 - 321,387 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955418259,860 - 321,340 (+)NCBIChiLan1.0ChiLan1.0
HBEGF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5140,332,843 - 140,346,603 (-)EnsemblGRCh38hg38GRCh38
GRCh385140,332,843 - 140,346,603 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh375139,712,428 - 139,726,188 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365139,692,612 - 139,706,358 (-)NCBINCBI36hg18NCBI36
Celera5135,789,059 - 135,802,819 (-)NCBI
Cytogenetic Map5q31.3NCBI
HuRef5134,857,589 - 134,871,349 (-)NCBIHuRef
CHM1_15139,145,572 - 139,159,324 (-)NCBICHM1_1
Hbegf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391836,637,980 - 36,648,858 (-)NCBIGRCm39mm39
GRCm39 Ensembl1836,637,980 - 36,648,858 (-)Ensembl
GRCm381836,504,927 - 36,515,805 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1836,504,927 - 36,515,805 (-)EnsemblGRCm38mm10GRCm38
MGSCv371836,664,581 - 36,675,459 (-)NCBIGRCm37mm9NCBIm37
MGSCv361836,630,906 - 36,641,748 (-)NCBImm8
Celera1836,954,561 - 36,965,476 (-)NCBICelera
Cytogenetic Map18B2NCBI
cM Map1819.46NCBI
Hbegf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21828,106,284 - 28,116,167 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1828,105,760 - 28,116,441 (-)Ensembl
Rnor_6.01829,330,302 - 29,340,185 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1829,329,764 - 29,340,403 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01829,036,863 - 29,046,746 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41829,143,567 - 29,153,944 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11829,170,212 - 29,180,590 (-)NCBI
Celera1827,834,537 - 27,844,179 (-)NCBICelera
Cytogenetic Map18p11NCBI
HBEGF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15141,816,402 - 141,830,531 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5141,816,402 - 141,830,531 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05135,699,553 - 135,713,366 (-)NCBIMhudiblu_PPA_v0panPan3
HBEGF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1235,551,248 - 35,563,310 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl235,551,250 - 35,563,043 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha232,590,448 - 32,601,580 (-)NCBI
ROS_Cfam_1.0236,006,883 - 36,018,938 (-)NCBI
UMICH_Zoey_3.1233,058,605 - 33,070,652 (-)NCBI
UNSW_CanFamBas_1.0233,926,053 - 33,938,108 (-)NCBI
UU_Cfam_GSD_1.0234,678,980 - 34,691,039 (-)NCBI
Hbegf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213152,266,443 - 152,278,566 (+)NCBI
SpeTri2.0NW_0049365319,332,939 - 9,345,039 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HBEGF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2142,102,456 - 142,115,344 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12142,102,455 - 142,115,192 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22148,047,629 - 148,058,091 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HBEGF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12342,981,640 - 42,995,116 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2342,981,640 - 42,994,995 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603434,887,898 - 34,902,819 (+)NCBIVero_WHO_p1.0
Hbegf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474333,112,105 - 33,124,145 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000005430   ⟹   ENSCLAP00000005334
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955418309,096 - 321,387 (+)Ensembl
RefSeq Acc Id: XM_005382030   ⟹   XP_005382087
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955418259,860 - 321,340 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005382031   ⟹   XP_005382088
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955418259,860 - 321,340 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005382087 (Get FASTA)   NCBI Sequence Viewer  
  XP_005382088 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005382087   ⟸   XM_005382030
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005382088   ⟸   XM_005382031
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCLAP00000005334   ⟸   ENSCLAT00000005430


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003788 Ensembl
NCBI Gene Hbegf ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Hbegf  heparin binding EGF like growth factor    heparin-binding EGF-like growth factor  Symbol and/or name change 5135510 APPROVED