Hint1 (histidine triad nucleotide binding protein 1) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Hint1 (histidine triad nucleotide binding protein 1) Chinchilla lanigera
Analyze
Symbol: Hint1
Name: histidine triad nucleotide binding protein 1
RGD ID: 8974305
Description: ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); hydrolase activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of calcium-mediated signaling (ortholog); purine ribonucleotide catabolic process (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Charcot-Marie-Tooth disease (ortholog); Gamstorp-Wohlfart syndrome (ortholog); FOUND IN cytosol (ortholog); histone deacetylase complex (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: histidine triad nucleotide-binding protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554082,674,109 - 2,678,528 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554082,673,950 - 2,678,528 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Hint1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554082,674,109 - 2,678,528 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554082,673,950 - 2,678,528 (-)NCBIChiLan1.0ChiLan1.0
HINT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5131,159,027 - 131,171,735 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl5131,155,383 - 131,224,468 (-)EnsemblGRCh38hg38GRCh38
GRCh385131,159,027 - 131,165,256 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh375130,494,720 - 130,500,949 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh375130,494,976 - 130,501,041 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365130,522,776 - 130,528,935 (-)NCBINCBI36hg18NCBI36
Celera5126,625,253 - 126,631,412 (-)NCBI
Cytogenetic Map5q23.3NCBI
HuRef5125,686,002 - 125,692,067 (-)NCBIHuRef
CHM1_15129,927,969 - 129,934,034 (-)NCBICHM1_1
Hint1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391154,757,209 - 54,761,332 (+)NCBIGRCm39mm39
GRCm381154,866,383 - 54,870,506 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1154,866,383 - 54,870,501 (+)EnsemblGRCm38mm10GRCm38
MGSCv371154,679,940 - 54,683,998 (+)NCBIGRCm37mm9NCBIm37
MGSCv361154,709,861 - 54,713,919 (+)NCBImm8
Celera1159,453,774 - 59,457,833 (+)NCBICelera
Cytogenetic Map11B1.3NCBI
Hint1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21038,989,516 - 38,993,259 (+)NCBI
Rnor_6.0 Ensembl1040,208,223 - 40,211,975 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01040,208,236 - 40,211,981 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01039,980,504 - 39,984,249 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41040,271,895 - 40,275,640 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1038,327,662 - 38,331,407 (+)NCBICelera
Cytogenetic Map10q22NCBI
HINT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15132,755,766 - 132,761,823 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5132,755,766 - 132,761,823 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05126,587,934 - 126,594,032 (-)NCBIMhudiblu_PPA_v0panPan3
HINT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11119,551,057 - 19,555,390 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Hint1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366473,843,544 - 3,849,428 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HINT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2133,467,137 - 133,475,734 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12133,469,765 - 133,475,813 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22138,701,204 - 138,705,746 (+)NCBISscrofa10.2Sscrofa10.2susScr3
HINT1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12334,019,009 - 34,025,006 (-)NCBI
ChlSab1.1 Ensembl2334,014,501 - 34,025,323 (-)Ensembl
Hint1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473340,896,566 - 40,902,835 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000018687   ⟹   ENSCLAP00000018506
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554082,674,109 - 2,678,528 (-)Ensembl
RefSeq Acc Id: XM_005376066   ⟹   XP_005376123
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554082,673,950 - 2,678,528 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005376123 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005376123   ⟸   XM_005376066
- Sequence:
RefSeq Acc Id: ENSCLAP00000018506   ⟸   ENSCLAT00000018687


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000012693 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000018506 ENTREZGENE
Ensembl Transcript ENSCLAT00000018687 ENTREZGENE
NCBI Gene Hint1 ENTREZGENE