Linc02915 (long intergenic non-protein coding RNA 2915) - Rat Genome Database

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Gene: Linc02915 (long intergenic non-protein coding RNA 2915) Chinchilla lanigera
Analyze
Symbol: Linc02915
Name: long intergenic non-protein coding RNA 2915
RGD ID: 8965813
Description: ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog)
Type: ncrna
RefSeq Status: MODEL
Previously known as: chromosome unknown C15orf54 homolog; chromosome unknown open reading frame, human C15orf54; CUNH15orf54; LOC102005140; putative uncharacterized protein C15orf54 homolog
RGD Orthologs
Human
Mouse
Bonobo
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554166,178,585 - 6,178,974 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
Linc02915
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554166,178,585 - 6,178,974 (+)NCBIChiLan1.0ChiLan1.0
LINC02915
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381539,250,669 - 39,254,845 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1539,250,682 - 39,254,845 (+)EnsemblGRCh38hg38GRCh38
GRCh371539,542,870 - 39,547,046 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361537,330,211 - 37,334,340 (+)NCBINCBI36Build 36hg18NCBI36
Celera1516,304,366 - 16,308,529 (+)NCBICelera
Cytogenetic Map15q14NCBI
HuRef1516,386,456 - 16,390,618 (+)NCBIHuRef
CHM1_11539,662,268 - 39,666,430 (+)NCBICHM1_1
T2T-CHM13v2.01537,055,605 - 37,059,781 (+)NCBIT2T-CHM13v2.0
Gm32929
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm382117,865,629 - 117,867,222 (+)NCBIGRCm38GRCm38mm10GRCm38
Celera2119,012,579 - 119,014,173 (+)NCBICelera
Cytogenetic Map2E5NCBI
LOC100981651
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21628,493,964 - 28,494,503 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11532,645,243 - 32,645,763 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01518,194,424 - 18,195,749 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11536,446,744 - 36,449,239 (+)NCBIpanpan1.1PanPan1.1panPan2
LOC103245858
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12643,742,500 - 43,759,370 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604897,192,738 - 97,193,493 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005415397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGCD01016933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005415397   ⟹   XP_005415454
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554166,178,585 - 6,178,974 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005415454 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005415454   ⟸   XM_005415397
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC102005140 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-10 Linc02915  long intergenic non-protein coding RNA 2915  CUNH15orf54  chromosome unknown C15orf54 homolog  Symbol and/or name change 5135510 APPROVED
2017-10-10 CUNH15orf54  chromosome unknown C15orf54 homolog  LOC102005140  chromosome unknown open reading frame, human C15orf54  Symbol and/or name change 5135510 APPROVED