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Gene: Cntn2 (contactin 2) Chinchilla lanigera

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Symbol:

Cntn2

Name:

contactin 2

RGD ID:

8965086

Description:

ENCODES a protein that exhibits carbohydrate binding (ortholog); cell adhesion mediator activity (ortholog); INVOLVED IN adult walking behavior (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); familial adult myoclonic epilepsy 5 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cell surface (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

contactin 2 (axonal); contactin-2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CNTN2 (contactin 2)	NCBI	Ortholog
Mus musculus (house mouse):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CNTN2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CNTN2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CNTN2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CNTN2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	40,831,850 - 40,858,569 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	40,831,897 - 40,862,445 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

familial adult myoclonic epilepsy 5 (ISO)

gastrointestinal stromal tumor (ISO)

high grade glioma (ISO)

Hypokalemic Periodic Paralysis, Type 1 (ISO)

lung disease (ISO)

parathyroid carcinoma (ISO)

T-cell adult acute lymphocytic leukemia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adult walking behavior (ISO)

axon guidance (ISO)

axonal fasciculation (ISO)

axonogenesis (ISO)

cell-matrix adhesion (ISO)

central nervous system myelination (ISO)

central nervous system neuron differentiation (ISO)

cerebral cortex GABAergic interneuron migration (ISO)

clustering of voltage-gated potassium channels (ISO)

establishment of localization in cell (ISO)

establishment of protein localization to juxtaparanode region of axon (ISO)

fat cell differentiation (ISO)

G protein-coupled adenosine receptor signaling pathway (ISO)

learning (ISO)

microtubule cytoskeleton organization (ISO)

negative regulation of neuron differentiation (ISO)

neuron migration (ISO)

neuron projection development (ISO)

positive regulation of adenosine receptor signaling pathway (ISO)

positive regulation of protein processing (ISO)

presynaptic membrane organization (ISO)

protein localization to juxtaparanode region of axon (ISO)

protein processing (ISO)

receptor internalization (ISO)

reduction of food intake in response to dietary excess (ISO)

regulation of astrocyte differentiation (ISO)

regulation of axon diameter (ISO)

regulation of cell morphogenesis (ISO)

regulation of neuronal synaptic plasticity (ISO)

response to dietary excess (ISO)

Cellular Component

axon (ISO)

axon initial segment (ISO)

cell surface (ISO)

juxtaparanode region of axon (ISO)

myelin sheath (ISO)

neuron projection (ISO)

neuronal cell body (ISO)

node of Ranvier (ISO)

plasma membrane (ISO)

postsynaptic membrane (ISO)

synapse (ISO)

Molecular Function

carbohydrate binding (ISO)

cell adhesion mediator activity (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Cntn2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	40,831,850 - 40,858,569 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	40,831,897 - 40,862,445 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNTN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	205,042,949 - 205,078,289 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	205,042,937 - 205,078,289 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	205,012,077 - 205,047,417 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	203,278,963 - 203,313,761 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	201,743,996 - 201,778,793	NCBI
Celera	1	178,147,407 - 178,182,200 (+)	NCBI		Celera
Cytogenetic Map	1	q32.1	NCBI
HuRef	1	176,177,847 - 176,212,673 (+)	NCBI		HuRef
CHM1_1	1	206,435,687 - 206,470,502 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	204,307,317 - 204,342,659 (+)	NCBI		T2T-CHM13v2.0

Cntn2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	132,437,163 - 132,470,989 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	132,437,165 - 132,470,994 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	132,509,425 - 132,543,251 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	132,509,427 - 132,543,256 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	134,406,002 - 134,439,517 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	134,336,973 - 134,370,462 (-)	NCBI		MGSCv36	mm8
Celera	1	135,118,092 - 135,152,003 (-)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	57.42	NCBI

Cntn2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	46,497,269 - 46,528,112 (-)	NCBI		GRCr8
mRatBN7.2	13	43,942,868 - 43,975,973 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	43,947,265 - 43,975,887 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	46,554,249 - 46,582,887 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	47,842,379 - 47,871,008 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	45,103,086 - 45,131,717 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	49,280,913 - 49,314,061 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	49,285,310 - 49,313,940 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	54,356,315 - 54,389,667 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	45,399,915 - 45,428,789 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	45,413,957 - 45,442,832 (-)	NCBI
Celera	13	44,281,845 - 44,310,387 (-)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

CNTN2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	44,298,727 - 44,333,562 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	44,264,002 - 44,298,806 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	180,645,259 - 180,680,081 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	184,931,902 - 184,966,482 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	184,931,497 - 184,966,482 (+)	Ensembl	panpan1.1		panPan2

CNTN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	1,570,598 - 1,600,524 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	1,576,898 - 1,596,621 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	1,661,917 - 1,694,727 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	1,564,191 - 1,597,016 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	1,563,948 - 1,596,983 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	1,560,461 - 1,593,270 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	1,951,695 - 1,980,625 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	2,151,770 - 2,184,597 (+)	NCBI		UU_Cfam_GSD_1.0

Cntn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	70,057,146 - 70,080,384 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936557	7,297,422 - 7,320,846 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936557	7,297,429 - 7,320,666 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNTN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	65,736,740 - 65,776,396 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	65,737,488 - 65,776,412 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CNTN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	24,262,092 - 24,296,740 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	24,261,651 - 24,296,850 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	25,018,404 - 25,053,686 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cntn2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	6,056,339 - 6,073,588 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624807	6,052,591 - 6,080,421 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005375340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01006667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01153597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000017523 ⟹ ENSCLAP00000017354

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955406	40,831,850 - 40,858,569 (+)	Ensembl

RefSeq Acc Id:

XM_005375340 ⟹ XP_005375397

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955406	40,831,897 - 40,862,445 (+)	NCBI

Sequence:

show sequence

GCCAGCCAGTGAGCGGAGGCTGGGAGAGGGAGGAGCAGATCTTGATGCAGAGATGCTGCAGTGG
CTCTGGGAGCGCACACACGCGCGCCCTCACTGCCACCGCCGCCGCCGCTGTGGCCGCCGCTGCA
CCAGGATAGCCAGCGACTGAGGCCGGCAGGGGCCTCCAGCAGCTGCCCGAGAGTTGGCTGCGGG
GCCGTCTCTGCTCACCAACCCCAGCAGCATTCACCTGCCCATCCAGCCCCTTCCCTCACTGCAG
GTGCTTCTCAGCCTCCAGCCCGGGGCGCCTCAGCTGGCCTGAGGCTCCTCTCCTCAGATCCCCT
CCTCCACCTGCACAGGCCACCATGGGGACACCCCCCAGGATGAAGCCACACCTGCCGCTGCTGC
TGCTGGCCACCTCAGCCCTCGTCTCCTCCCCAGCTTGGAGTCTGGCCCAAGGATCCCCAACCAC
GTTTGGGCCTGTCTTTGAAGACCAGCCTCTCGGTCTGCTGTTCCCAGAGGAGTCCACAGAGGAG
CAGGTGACACTGGCATGCCGGGCCCGGGCCAGCCCTCCTGCCACCTACAGGTGGAAGATGAATG
GCACCGAGATGAAGCTGGAACCGGGCTCCCGTCACCAGTTGGTAGGGGGCAACCTGGTCATCAT
GAACCCCACCAAAGCACAGGATGCCGGTGTCTACCAGTGCCTGGCCTCAAACCCCGTGGGCACC
GTGGTCAGCAGGGAGGCCATCCTCCGCTTCGGCTTTCTGCAGGAATTCTCCAAAGAGGAGCGAG
ACCCAGTGAAGGCCCACGAAGGCTGGGGTGTGATGCTGCCCTGTAATCCACCTGCCCACTACCC
AGGCTTGTCCTACCGCTGGCTCCTCAACGAGTTCCCCAACTTCATCCCGACGGATGGGCGTCAC
TTCGTGTCCCAGACCACAGGGAACCTGTATATTGCACGGACCAATGCCTCGGACCTGGGCAACT
ACTCCTGCCTGGCCACCAGCCACATGGACTTCTCCACCAAGAGCGTCTTCAGCAAGTTCGCACA
GCTCAACCTGGCTGCAGAAGATCCCCGGCTCTTTGCACCCAGCATCAAGGCTCGGTTCCCCGCA
GAGACCTACGCACTGGTGGGACAGCAGGTCACCCTGGAATGCTTTGCCTTTGGGAACCCCGTCC
CCAGGATCAAGTGGCGCAAAGTGGACGGCTCCTTGTCCCCGCAGTGGGCCACCGCCGAGCCCAC
CCTGCAGATCCCCAGCGTGAGCTTCGAGGACGAGGGCACCTATGAGTGCGAGGCAGAGAACTCC
AAGGGCCGCGACACCGTCCAGGGCCGCATCATCGTGCAGGCTCAGCCCGAGTGGCTCAAGGTGA
TCGCAGACACAGAGGCCGACATAGGCGCCAACCTGCGCTGGGGCTGCGCAGCAGCTGGCAAGCC
CCGGCCCACAGTGCGCTGGCTGCGGAACGGGGAGCCCCTGGCCTCCCAGAACCGCGTGGAGGTG
CTGGCCGGGGACCTGCGGTTCTCCAAGCTGAGCCTGGAAGACTCAGGCATGTACCAGTGTGTGG
CGGAAAACAAGCACGGCACCATCTACGCCAGCGCTGAGCTGGCCGTGCAAGCGCTGGCCCCGGA
CTTCAGGCAGAACCCCGTCCGGCGTCTGATCCCAGCGGCCCGAGGCGGGGAGATCAGCATCGCC
TGCCAGCCACGGGCGGCACCCAAGGCCACCGTGCTCTGGAGCAAAGGCACTGAGATTCTGGTCA
ACAGCAGCAGAGTGACGGTGACTCCAGATGGCACCTTGATTATAAGGAACATCAGCCGCTCGGA
CGAAGGCAAATACACCTGCTTTGCTGAGAACTTCATGGGCAAGGCCAACAGCACGGGGGTCCTG
TCTGTGCGAGATGCAACGAAGATCACCCTGGCCCCCTCCAGTGCCGACATCAACCTGGGCGACA
ATCTGACCCTCCAATGCCATGCCTCCCATGACCCCACCATGGACCTCACCTTCACCTGGACCCT
GGATGACTTCCCCATCGACTTTGATAAGCCTGGGGGGCATTATCGGAGGGCCAGTGTGAAGGAG
ACTGTGGGGGACCTGACCATCCTGAATGCCCAGCTGCGCCACGGAGGGAAGTACACGTGCATGG
CCCAGACGGTGGTGGACAGCGCGTCAAAAGAGGCCACTGTCCTGGTCCGAGGTCCCCCAGGTCC
CCCGGGAGGTGTGGTGGTGAGGGACATCGGTGACACTACTGTCCAGCTCAGCTGGAGCCGTGGC
TTTGACAACCACAGCCCCATTGCCAAGTACACCCTGCAAGCGCGCACCCCACCTGCGGGCAAGT
GGAAGCAGGTCCGGACCAATCCTGCCAACATCGAGGGCAATGCTGAGACCGCCCAGGTGCTGGG
CCTCACACCCTGGATGGACTATGAGTTCCGGGTCTTAGCCAGCAACATCCTGGGTACCGGCGAG
CCCAGTGGGCCCTCCAGCAGAATCAGGACCAAGGAAGCAGTCCCTTCGGTGGCACCTTCAGGAC
TCAGCGGAGGAGGTGGAGCCCCTGGAGAGCTCATCGTCAACTGGACCCCCATGTCACGGGAGTA
CCAGAACGGAGACGGCTTCGGCTACCTGCTGTCCTTCCGCAGGCAGGGCAGCAGCAGCTGGCAG
ACCGCCCGGGTGCCTGGCGCCGACGCCCAGTACTTCGTCTACAGCAATGAGACCATCCGGCCCT
ACACACCCTTCGAGGTCAAGATCAGCAGCTACAACCGGCGTGGGGATGGGCCCGAGAGCCTCAC
AGCGATCGTGTACTCTGCCGAGGAAGAGCCCAGGGTGGCCCCTGCCAAGGTCTGGGCCAAGGGG
GTCTCATCCTCAGAGATGAACGTGACTTGGGAACCTGTGCAGCAGGACGTGAATGGGATTCTTC
TGGGGTACGAGATCCGCTACTGGAAAGCTGGGGACAAAGAAGCAGCTGCTGACCGAGTGAGGAC
AGCAGGGCTGGAGACCACAGCCTGTGTCGCGGGTCTGCACGCCAACACCAAGTACCACGTGACT
GTGCGGGCCTACAACCGGGCAGGCACCGGGCCTGCCAGCCCTTCTGCCAACGCCACAACCATGA
AGCCCCCGCCTCGACGGCCTCCCAGCAACATCTCCTGGACTTTCTCAAGCTCCAGCCTCAGCAT
CCAGTGGGACCCTGTGGTCGCTCTGCGAAACGAGTCTGCAGTCACTGGCTATAAGATGCTGTAC
CAGAATGACTTACACCCGACTCCCACACTGCACCTCACCAGCAAGAACTGGATAGAAATCCCCA
TGCTGGAAGACATTGGCCATGCCCTGGTACAGATTCGGACCACAGGCCCTGGAGGGGACGGTAT
CCCCACAGAAGTCCACATCGTGAGGAATGGAGGCACAAGCATGATGGTGGAGAACGCAGCGGGC
TGCCCGGCCCCATATCCTGGCGCCATCCTCTTCCGTTCTGTGGTGATGCTCATCCTCATAGGCT
ACCTGGAGCTCTGATCTCAGAGTCCCTCCCTCCGCAGCACAGCCAGCCACTCACCCCCATGGAC
ACAGCCAGCTGGCCCTGGCCCCTTCCTGATGCCAAGATGGCCCGACGCTGTGCTGAGAGGGGTT
GGTTTGAAATGCCTGCTTTAAATAGTACCCTTTTGTTGGAAGCAGAATATTTTATATTCTGCCA
CAGGACAGAACCATGCAAGGATATTTTCCTTAAATTGAGGCATCGGGCAGTGACTTCCATGGTG
ATGCTGAGCCCAATGCCTGGGCCCCTTGGGGTCCTGGGTGGAAGGAACAGGCCTATTGGACAAA
GGGGTTTTAAGATTCATCTTCAAAGCAGCAGAGATGGCACTCTGAGACTGCATGTGGCTCTGCC
ACCTGACAGAGACCTGGACCCAGCAAGACACCAGGCAGGAACAGGCTAAAGAAGTGGGACAAAG
CAAAAACATCAACTTCCCTCAACTAAGGAGGGCAAAGCCTGGGACCATAGCTTCCTCTCCTCCC
CTGAGGAGTGGCATGACGGGACCTGGCATTGTCCTCCATGACTCCGAGCTGCCCTCTCTGCCCT
GGTGGCTGAGACCCAGAGCCCTGATGCCCAGGGCCAGGAGCCTAGACTCCTTCAGGGTGAAGGG
ATGGGACTCCAGGCTGCCGCAGGTGAGAGCTGCCAAGTGTTGAGAGGCTGGGACCCCTCGTAGA
AAGGGGCGCCTGCCCGGGCCTGAGGCATGGTCACCATCCAGGTGACACTGCCTTCCCAGCCAGC
ACTGCCAACCCAACCCTGTCACCCCAAGCGTGACAGAGCCACTTCAGGTGGCTGGGTGACTAAA
GGGCTTGTTTTGAGGAGCCCCCCACCAAGACCCATCCTGCACAGCTCCCACCTTCCTCCAGCTC
TGCCTCCGACTCCCTGGCCCAGCTGCCAGCCGCAATGCAACACGCACTCTGTCCTTCCTTGTCC
TGAGCGTGGGAGGCTTCTGAGCAGGCAAGGACCGACATGGCCCAGGAATTCTCTGGACTGCTGG
GTGAGACCCGCTCTCCAGACTACTCGGACCACTCTTCCACATTCCCAGAAGAAAAGGGGATTAA
TAAAGGGACAGCCTACCTTGAACTCAGGGTGTATTGCCAGTCACAGAGCATTGGGGCTGGAAGA
GGCCTGACAGCTCGACTGATCACAGCCTGTACTTCACAGATGACGAAATGGAGGGCCAGCAAGG
GTTAGGGGCTCCTCCAGATCACACAGCCTGTAAGCGGCAGGGCTGGGAGAAGAACTGAGTCTCC
TACCTGGCTGTTCGAGGCTGTGTGTATGCAGAAGAGGCATACACACAGGAAGCAGTGCTGGTTG
GCCTCGTCCTGGCTGCGAAGGTGGCTGAGGCCACAGAGGCATGAGCATCCTCGAGGGTTCAGCT
TGGTGACCGCGCACATCAGGCCTGGTGTGGCTCTCAGTGCAGTCAGCTTCCTGGAGCCATCCAG
GCCCTCTGCCTTCTAAGCCTGGTTTCTACGGGAACTCAACCTGCTGCGCTGGCTTGACGCCCTT
GTCCCTCACCCTTGCTGCAGAAAGAGGTCAAAGCAAGGATGCTACATGGAGGCTACAGTGGCAG
TACAACCAGAATCCCTAAAGCCTGCACTGTGACAGTGGGCTATTCACACTTGGGAGCAATGGGA
CAGGCATCTGGAAGGGCATTTGCCCCCAAAGCACCCTGAGCCTGTTTTCTGTAGTTTACAGTTA
GAGCTCTATTTTGTTATGGTTTTTAAACTTCTAAGTCCTGCTCTATTTTGGGGGGCAGGTTTAT
GTTGATGTTCATCCACAATTTTTTAAAACCGTAAGCTCACCTTCTCCTCTACTCCCAACTCCAC
CTGCCCTAGGCCCCCTCGTCTGCTCCTCGCCCCCACACATAAGGGTGCAGGGGCTCGGCTCCTG
GCCATTCTCTCTTGCAGGGAACTAGATGGCCTAGCATCTGTCCCTTGCTGGCTGGGATCTGACC
CATGCCCAGCTGTTGGAAAGGGGACAGTGAAAGAAAGCAAGCTGCTAAGCTTTGTCTGATTCTC
TGCCCATTCCTCAGCTTCAGCAGGCAGGCAGGGAGCAGGTGTCTAGTTGCCAGACTTGGGGATG
ATCTGGCTTTCACAGGACCTAAGCTTGCTTAAAGAAATACAGCCAAGAACTTCCTTCTAATGAG
GTACATGAGAAAGAGGAAGGCGGATCTGCTGGGAGATCCAGGGGACATATTTAACCAGGAAACT
CTGACCGCTGTGCAGGCAGAATTTGTTTGGGGATGTAGAACTATACTAAAGGCAGATGATCCTG
CAGCCTGACATTCCAGATAGGTTTGATAAGACAGTAGGTGACTTGAGGACATGCATGCTTGCAA
AACCCTCTTGCCGAGGTGGCTTGGACATGTGTTTGCTTGGAGGAGCAGACCAGACTATATGGCT
TCTTAAGAGTCTCTTCCTGCCCAAGGGTCTGCTACTTTGTCTTCTCTGCTGAGATGGGCTGGGG
GAGCTGACGGGGGTTCAGTCCCTATCCCCGGAGTCACGACTCAGTCCTAGATTCTCCACACTAA
GCCCCAGAGGAAGTGGCCAGGGAGACGACCACAGACAAGTACGCTGCCTGAGAGGTTAGTGGCC
TGTGAATGACCAGAAGATGGGACAGCCAGCTAGCAGACACCTATTCAGAGGCCAGGGAGACAGG
TGCCCATCTGCACACACTGGGTCTGGCTCCAGGTTTGGCTTTTGGGTTCTTGTGGTTTAGGGCA
GGGCAGCTCTCCCCAGAAGGAGTCTCCAGGCCTTCAAGGTTGTTTCTACTTTCATTCGGGGCAG
AACTAACACAGACTGTGTCAGGAAGTGGCAGGCCATGGGGGCAGGGGTGGGGCTATCTTCTTCC
TTATTTGATAAAGTAACAACAGGAGAGACAGGAATTAGATATCAGGGAAACTTCTGCAATGAGA
CCCTGGAAAGAGTTCAGTGGCCTCTTGTCTAGGGAGCTTTAAGTTTTCAGTTTCATTGAGAGGT
CTGAGCCACATGAACTTGTGACGTGAGGGGGTGGGAGATGCCTGAAGTTCTTCCAGAGCTGAGA
TTCTTAGAATCAAGTGCTGAACACAGGAAATCTTGCAAAGGCCATCTGCTGTGGTCCCTGCACC
TTAGAGGAAGCCATAAAGGGGGAAGGCTCACCCCAGGGATTGCGGTTACCACCCAGTGCCTTCC
CCAGTGGGCACTGCCCCTGGGCAGTCCCAAGAGCCATCCACCTGCACTCAGGGCAAGAGCTCAA
AAGTTAAGATGGCTGAGGATGTGTGATTCCCCTCATCCCTTTCCCCTGTCAAACTGAGACTGCC
AGTGGGGCTCCTGTGTGTCAGAGGGGACAGCAGTACTCTCACACCTGTGTCACCGGCACAGGTG
TGGTGCCATTTCCCTTCCTCGGACTGAACCTGGGCCAAAGATGGGTAGGAAGGATCACAGGGCA
TTTTTCTAAGGGACTCCGAGAGTTCTGCAGAAACAGGCATCCGGTGGGGTGAGGGCACCCCATG
GACTTATACATGTGGCCATTAGCTTTGGAAAGGCAGGGCATAAAGGACAATTGAAGAGGAACAA
AAAGGGTCAGGTGGCTTTGCCCAGAGCCCCAGGAGCCTCAGAGGCCTAAGGCATTTTGTGCCCT
TAGATGGGATACATCCTCTCATGGCCCAAGATGCCAACTGACCACCCACGTCAGGACCTGCATA
GCTTAGAGCTCAGGGTGTGGCACACGCCAGGCCTTTGCTGGACCACTGATTTGAAGGATTCTGT
TCAAAGGATGCCACCCACTGGCCCCTGAGTTTGCTCTTGTACTTCTTGTAATGGTAGCTATTTA
CTGAATCTGGTAGCGGGCAGTTCTTAAATAAAGATGGTTTCTCAACCTGC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005375397	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000017354
	ENSCLAP00000017354.1

RefSeq Acc Id:

XP_005375397 ⟸ XM_005375340

- UniProtKB:

A0A8C2VLC7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGTPPRMKPHLPLLLLATSALVSSPAWSLAQGSPTTFGPVFEDQPLGLLFPEESTEEQVTLACR
ARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAI
LRFGFLQEFSKEERDPVKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTG
NLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETYALVG
QQVTLECFAFGNPVPRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQ
GRIIVQAQPEWLKVIADTEADIGANLRWGCAAAGKPRPTVRWLRNGEPLASQNRVEVLAGDLRF
SKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIACQPRAAP
KATVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGVLSVRDATK
ITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASVKETVGDLTI
LNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPI
AKYTLQARTPPAGKWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSR
IRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPGA
DAQYFVYSNETIRPYTPFEVKISSYNRRGDGPESLTAIVYSAEEEPRVAPAKVWAKGVSSSEMN
VTWEPVQQDVNGILLGYEIRYWKAGDKEAAADRVRTAGLETTACVAGLHANTKYHVTVRAYNRA
GTGPASPSANATTMKPPPRRPPSNISWTFSSSSLSIQWDPVVALRNESAVTGYKMLYQNDLHPT
PTLHLTSKNWIEIPMLEDIGHALVQIRTTGPGGDGIPTEVHIVRNGGTSMMVENAAGCPAPYPG
AILFRSVVMLILIGYLEL

hide sequence

Ensembl Acc Id:

ENSCLAP00000017354 ⟸ ENSCLAT00000017523

Protein Domains

Fibronectin type-III Ig-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000011919	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000017523	ENTREZGENE
	ENSCLAT00000017523.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Contactin-1_2_Ig1	UniProtKB/TrEMBL
	FN3_dom	UniProtKB/TrEMBL
	FN3_sf	UniProtKB/TrEMBL
	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_I-set	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_sub2	UniProtKB/TrEMBL
NCBI Gene	Cntn2	ENTREZGENE
PANTHER	CONTACTIN-2	UniProtKB/TrEMBL
	PROTEIN SIDEKICK	UniProtKB/TrEMBL
Pfam	fn3	UniProtKB/TrEMBL
	I-set	UniProtKB/TrEMBL
	Ig_3	UniProtKB/TrEMBL
PROSITE	FN3	UniProtKB/TrEMBL
	IG_LIKE	UniProtKB/TrEMBL
SMART	FN3	UniProtKB/TrEMBL
	IGc2	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
	SSF49265	UniProtKB/TrEMBL
UniProt	A0A8C2VLC7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-16	Cntn2	contactin 2		contactin 2 (axonal)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

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