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Gene: Oat (ornithine aminotransferase) Chinchilla lanigera

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Symbol:

Oat

Name:

ornithine aminotransferase

RGD ID:

8965051

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); ornithine aminotransferase activity (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ornithine aminotransferase, mitochondrial

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955477	2,429,776 - 2,450,624 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955477	2,430,146 - 2,450,135 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

gyrate atrophy (ISO)

Liver Neoplasms (ISO)

optic atrophy (ISO)

perinatal necrotizing enterocolitis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

mitochondrial matrix (ISO)

mitochondrion (ISO)

nucleoplasm (ISO)

Molecular Function

identical protein binding (ISO)

ornithine aminotransferase activity (ISO)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

AGAT deficiency pathway (ISO)

arginine and proline metabolic pathway (ISO)

guanidinoacetate methyltransferase deficiency pathway (ISO)

gyrate atrophy pathway (ISO)

hyperprolinemia type I pathway (ISO)

hyperprolinemia type II pathway (ISO)

ornithine translocase deficiency pathway (ISO)

prolidase deficiency pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Oat
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955477	2,429,776 - 2,450,624 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955477	2,430,146 - 2,450,135 (-)	NCBI	ChiLan1.0	ChiLan1.0

OAT
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	124,397,303 - 124,418,923 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	124,397,303 - 124,418,976 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	126,085,872 - 126,107,492 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	126,075,862 - 126,097,441 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	126,075,861 - 126,097,450	NCBI
Celera	10	119,858,073 - 119,879,754 (-)	NCBI		Celera
Cytogenetic Map	10	q26.13	NCBI
HuRef	10	119,770,641 - 119,792,323 (-)	NCBI		HuRef
CHM1_1	10	126,367,759 - 126,389,447 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	125,275,480 - 125,297,100 (-)	NCBI		T2T-CHM13v2.0

Oat
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	132,159,204 - 132,178,127 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	132,159,207 - 132,178,127 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	132,557,475 - 132,576,398 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	132,557,478 - 132,576,398 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	139,749,158 - 139,768,081 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	132,395,822 - 132,408,481 (-)	NCBI		MGSCv36	mm8
Celera	7	132,362,445 - 132,381,370 (-)	NCBI		Celera
Cytogenetic Map	7	F3	NCBI
cM Map	7	76.3	NCBI

Oat
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	196,777,973 - 196,797,754 (-)	NCBI		GRCr8
mRatBN7.2	1	187,347,862 - 187,367,644 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	187,347,865 - 187,367,682 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	195,698,027 - 195,717,805 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	202,876,939 - 202,896,719 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	195,550,072 - 195,569,851 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	204,562,289 - 204,582,070 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	204,562,289 - 204,582,070 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	211,555,927 - 211,575,708 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	192,026,623 - 192,046,404 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	192,176,503 - 192,196,285 (-)	NCBI
Celera	1	185,092,131 - 185,111,563 (-)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

OAT
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	136,243,004 - 136,265,666 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	136,248,355 - 136,271,017 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	120,955,805 - 120,977,484 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	125,224,032 - 125,245,530 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	125,224,032 - 125,245,504 (-)	Ensembl	panpan1.1		panPan2

OAT
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	33,763,661 - 33,788,817 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	33,758,473 - 33,788,759 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	33,826,851 - 33,851,641 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	34,320,605 - 34,345,627 (-)	NCBI		ROS_Cfam_1.0
UU_Cfam_GSD_1.0	28	34,120,928 - 34,145,786 (-)	NCBI		UU_Cfam_GSD_1.0

Oat
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	12,817,898 - 12,836,941 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	12,723,305 - 12,743,422 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	12,723,363 - 12,743,367 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

OAT
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	133,808,193 - 133,830,761 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	133,808,193 - 133,830,517 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	145,318,779 - 145,341,064 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

OAT
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	117,060,819 - 117,083,160 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	117,060,393 - 117,083,126 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	78,377,280 - 78,399,645 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Oat
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	22,664,129 - 22,678,535 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	22,657,158 - 22,679,213 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005401970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013503082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01055522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01055523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCQ01007932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000005521 ⟹ ENSCLAP00000005424

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955477	2,429,776 - 2,450,624 (-)	Ensembl

RefSeq Acc Id:

XM_005401970 ⟹ XP_005402027

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955477	2,430,146 - 2,450,135 (-)	NCBI

Sequence:

show sequence

GCGGACGCCACTTCTTAAGCTTTGTGACGTGCGGCGCAGCTGCGCTCCTCAGGTCGCCACCTTG
TGTCGCGGAAGGTTCTTCTAGGCGCAGTCAGTTACTGGATCCTCTGAAGGCTGTCCCTGGATCT
CCAGTGAAAAATCTATATTCTAGCCTGAACGGTGGAAGAAAGAAGAGTTGGACGCAATGCTTTC
CAAGCTAGCACATTTGCAAATCCTTGCTGTACTTCGTCGTGGAGTTCATTCTTCAGTGACTTGT
GCCACATCTGTTGCAACTAAGAAGACAGTCCAAGGCCCTCCATCCTCTGATTACATTTTTGAGC
GAGAATCTAAATATGGTGCACATAATTACCATCCTTTACCTGTGGCTCTGGAGAGAGGAAAAGG
TATTTATGTGTGGGATGTAGAAGGCAGAAAATATTTCGACTTCCTGAGTGCTTACAGTGCAGTC
AGCCAAGGGCACTGCCACCCCAAGATTGTGAATGCTCTGAAGAGTCAGGTAGACAAGTTGACCT
TAACATCTCGAGCTTTCTATAATGACGTACTTGGTGAATACGAGGAGTACATTACTAAACTTTT
CAAGTATCACAAAGTTCTTCCTATGAACACAGGAGTGGAGGCTGGCGAGACTGCCTGTAAACTT
GCTCGTCGGTGGGGCTATACTGTGAAAGGCATTCAGAAATACAAAGCAAAGATTATTTTTGCAG
CTGGAAACTTTTGGGGTAGAACATTGTCTGCCATCTCCAGTTCCACAGACCCAACCAGTTATGA
AGGGTTTGGACCTTTCATGCCAGGTTTTGAAATCATCCCATATAATGATCTGCCTGCACTCGAG
CGTGCTCTTCAGGATCCAAATGTTGCTGCCTTCATGGTAGAACCAATTCAGGGCGAAGCAGGTG
TTGTTGTTCCAGATCCAGGGTACCTAGTGGGAGTTCGAGAACTCTGCACAAGGCATGAGGTCCT
GTTTATTGCTGATGAGATACAGACAGGGTTGGCCAGAACTGGTAAATGGTTGGCTGTTGATCAT
GAAAATGTTAGACCTGACATAGTTCTTCTTGGAAAGGCCCTTTCTGGAGGCTTATACCCTGTGT
CCGCAGTGCTATGTGATGACAACATAATGCTGACCATTAAACCAGGGGAACATGGGTCAACGTA
TGGTGGGAATCCCTTGGGCTGTCGCGTGGCTGTTGCAGCCCTTGAGGTTTTGGATGAAGAAAAC
CTTGCTGCAAATGCAGAGAAAATGGGTACTATCTTGAGAAATGAACTCATGAAGCTGCCCTCTG
ATGTTGTAACTGCTGTTAGAGGAAAAGGATTGTTAAACGCTATTGTTATTAGAGAAACCAGAGA
TTACGATGCTTGGAAGGTGTGCCTGCGGCTTCGAGATAATGGGCTTCTGGCTAAGCCCACCCAT
GGCCATATTATCAGGTTGGCCCCTCCACTTGTGATCAAGGAGGATGAGATCCAGGAGGCTGTGG
AAATCATTAACAAGACCATCCTGTCTTTCTGAGGGTAGGAACAGTTCATTGGGTCCTGGGAGCT
GGCTGGACAGAGGTGTCCTATGAAAAGCTCTGCTCTGAAAGTGGGCACATTTAACCCCCATGTG
CATGTATTTTTTTTCAATCGTTGAGTAATAGAGTGACATTTATGAACATGTAGTTGGCTGTGTA
ACATAACTAAGAATGGATGCAGGGCTGGGGATGCAGCTCAGCGGCACAAGTGCCTGCCTGGCAA
GCACAAGGTCCCGAGTTCAATTCCCAGTACCAAAAGAAAGGACAGGCACAAACAGTAGCAAAGT
TAAAAAAAGAAAAAGAATGGATGGGTCCTGTATTTGGTTAAATTTGTGACTGTGTATGTATTTT
CTAAGGTGAAATGCTTCTGTCTGTATATAAATAGCCTTCAAATCAAGTCCTTTAGTATAATTGA
CATACTTTTTATAATTTCTTTGCTGGTATAAATGTTTTGTATTTGAAAAAGTTATCTGAGATAT
TATGTAAAAGACTTGCTTAACCTTATGTATTGAATGATTGTAACCACTGAGGAATCATTAATGG
TTAAGCATATATAAAATAGTATTAAATAAACATTATATTGGCTAACACCAGACTGTATTCTACA
GATGTCATTATTTTGAATTAAAAATGTGTTCCTAAATTGTTTTAAGTGCTTAATTATAATTTGT
AAGGTAAAACATTTATTTTTAACATTTCTTTAAGTCTGAAATAAAGCTTATGTTTAAAATGTCC
AATTTTGATCAGTATACTCTTACTGTAGTCTTACTTTGGTAGTCTTACCTAATATCTTTAAGCT
CTTTAACTTACCTGTTAGTCTTACCTAACATCGTTAAGCTCTTTGAGAATGTTCTTACTTTGCT
TTATTCCTTGTGCTTTCCAAGATCATAAGTTTAGCTGGGCCTGGTGGTTCATGCCTTTATTCCT
AGCTCTTTGGGGGAGGTCAAGGGAAGAGGACTACAGTTTAGCAAGACACTGTCTCAAACTTCCG
GGAATACAGCTCAGTGTGAAGGCCCTGAAGGGGTTCAATTCTCAGTACCCAAACCAGCCAATCA
CCCAGCCAGCCAGCCAACCACCCAAGCAACCAGTTTATGTCATTCTTCAGTGATTGTATTTCAT
GGTAAAGTAAAACCTTGGTTTGTGAGTAGCTTACTCTGAATGTTTTGTAAGATGAGCAAACATT
TCTAATAGTCTTTAACTGGATAAACAAATGATGTCTTATGATGAGTAGTATTGGTGTCAAATGT
CACGTGATCACAACTGAGTCAATGGTTCCTCTCACCCTCCCTCACTATGGGATTGTTTCCCACC
AGCAAGAGGTTATGGAGCAGATCTCATCTGTACAAGAGGAGTAAAAGGTGGAAGAATCCCTCAC
TTCAAATGAGATTAGGGAGATGTGTAAAATGTGAGAAACAGGGCAAAATTTTGTAGAAAAGTAT
CATTCAAATAAGGCTATAGCAGTGTGAGCAATGAATCTGTTTAACCATAATGTAGTGTCACATT
TCCACAAAATCCTCAAAAGGAGGAGGCACAAGCAAGTGTCATTGGATAGGTTCCTTGTTAAAGT
TGCACAGAAAGAGAAAGATTTCATGAGCCAATAAATAAGTTAGTGAAAGTCGTTTTACACAATA
ACCCTCCTCTCTTGTCTCCCTCACACCAGCCACAAAGCTTTTCACAGCTAAGTGTGGGTTAACT
TAATTTTCTTTTAGTTTGTATTTTATTATTTTGCACTATATATAGTATTGCATTTTATATGAAT
ATTTTTGGGTTGTGGAATGAATCATGTGTTTCCATTATTTCTTAGGGGGAAATTTGCTTTGATG
TATAGGTGCTTTGGAGTATGAGCATGTTTCTGGAATGAATTATGCTCACAAACCAAGGTTTTAT
TGTGTACGGGCATAATATAATTTTGTCTCACATTAGGGGACCACTTAGCTTGTTTCAGGTTTTT
GGCTTTTTAAATAAAGCTTGTGTTCATATATTC

hide sequence

RefSeq Acc Id:

XM_013503082 ⟹ XP_013358536

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955477	2,430,146 - 2,450,106 (-)	NCBI

Sequence:

show sequence

TGCGGCGCAGCTGCGCTCCTCAGGTCGCCACCTTGTGTCGCGGAAGGTTCTTCTAGGCGCAGTC
AGGGTTCCTTTGCAAATGTTACCGAGCATCAGTAAATTTAACTGAATCCAGTGGAACCACGGCC
CCCTCCCTTTGCTACGTTATACCTTGCCTTTTGGTGTTGAGATTTGCCGTTTAGTTACTGGATC
CTCTGAAGGCTGTCCCTGGATCTCCAGTGAAAAATCTATATTCTAGCCTGAACGGTGGAAGAAA
GAAGAGTTGGACGCAATGCTTTCCAAGCTAGCACATTTGCAAATCCTTGCTGTACTTCGTCGTG
GAGTTCATTCTTCAGTGACTTGTGCCACATCTGTTGCAACTAAGAAGACAGTCCAAGGCCCTCC
ATCCTCTGATTACATTTTTGAGCGAGAATCTAAATATGGTGCACATAATTACCATCCTTTACCT
GTGGCTCTGGAGAGAGGAAAAGGTATTTATGTGTGGGATGTAGAAGGCAGAAAATATTTCGACT
TCCTGAGTGCTTACAGTGCAGTCAGCCAAGGGCACTGCCACCCCAAGATTGTGAATGCTCTGAA
GAGTCAGGTAGACAAGTTGACCTTAACATCTCGAGCTTTCTATAATGACGTACTTGGTGAATAC
GAGGAGTACATTACTAAACTTTTCAAGTATCACAAAGTTCTTCCTATGAACACAGGAGTGGAGG
CTGGCGAGACTGCCTGTAAACTTGCTCGTCGGTGGGGCTATACTGTGAAAGGCATTCAGAAATA
CAAAGCAAAGATTATTTTTGCAGCTGGAAACTTTTGGGGTAGAACATTGTCTGCCATCTCCAGT
TCCACAGACCCAACCAGTTATGAAGGGTTTGGACCTTTCATGCCAGGTTTTGAAATCATCCCAT
ATAATGATCTGCCTGCACTCGAGCGTGCTCTTCAGGATCCAAATGTTGCTGCCTTCATGGTAGA
ACCAATTCAGGGCGAAGCAGGTGTTGTTGTTCCAGATCCAGGGTACCTAGTGGGAGTTCGAGAA
CTCTGCACAAGGCATGAGGTCCTGTTTATTGCTGATGAGATACAGACAGGGTTGGCCAGAACTG
GTAAATGGTTGGCTGTTGATCATGAAAATGTTAGACCTGACATAGTTCTTCTTGGAAAGGCCCT
TTCTGGAGGCTTATACCCTGTGTCCGCAGTGCTATGTGATGACAACATAATGCTGACCATTAAA
CCAGGGGAACATGGGTCAACGTATGGTGGGAATCCCTTGGGCTGTCGCGTGGCTGTTGCAGCCC
TTGAGGTTTTGGATGAAGAAAACCTTGCTGCAAATGCAGAGAAAATGGGTACTATCTTGAGAAA
TGAACTCATGAAGCTGCCCTCTGATGTTGTAACTGCTGTTAGAGGAAAAGGATTGTTAAACGCT
ATTGTTATTAGAGAAACCAGAGATTACGATGCTTGGAAGGTGTGCCTGCGGCTTCGAGATAATG
GGCTTCTGGCTAAGCCCACCCATGGCCATATTATCAGGTTGGCCCCTCCACTTGTGATCAAGGA
GGATGAGATCCAGGAGGCTGTGGAAATCATTAACAAGACCATCCTGTCTTTCTGAGGGTAGGAA
CAGTTCATTGGGTCCTGGGAGCTGGCTGGACAGAGGTGTCCTATGAAAAGCTCTGCTCTGAAAG
TGGGCACATTTAACCCCCATGTGCATGTATTTTTTTTCAATCGTTGAGTAATAGAGTGACATTT
ATGAACATGTAGTTGGCTGTGTAACATAACTAAGAATGGATGCAGGGCTGGGGATGCAGCTCAG
CGGCACAAGTGCCTGCCTGGCAAGCACAAGGTCCCGAGTTCAATTCCCAGTACCAAAAGAAAGG
ACAGGCACAAACAGTAGCAAAGTTAAAAAAAGAAAAAGAATGGATGGGTCCTGTATTTGGTTAA
ATTTGTGACTGTGTATGTATTTTCTAAGGTGAAATGCTTCTGTCTGTATATAAATAGCCTTCAA
ATCAAGTCCTTTAGTATAATTGACATACTTTTTATAATTTCTTTGCTGGTATAAATGTTTTGTA
TTTGAAAAAGTTATCTGAGATATTATGTAAAAGACTTGCTTAACCTTATGTATTGAATGATTGT
AACCACTGAGGAATCATTAATGGTTAAGCATATATAAAATAGTATTAAATAAACATTATATTGG
CTAACACCAGACTGTATTCTACAGATGTCATTATTTTGAATTAAAAATGTGTTCCTAAATTGTT
TTAAGTGCTTAATTATAATTTGTAAGGTAAAACATTTATTTTTAACATTTCTTTAAGTCTGAAA
TAAAGCTTATGTTTAAAATGTCCAATTTTGATCAGTATACTCTTACTGTAGTCTTACTTTGGTA
GTCTTACCTAATATCTTTAAGCTCTTTAACTTACCTGTTAGTCTTACCTAACATCGTTAAGCTC
TTTGAGAATGTTCTTACTTTGCTTTATTCCTTGTGCTTTCCAAGATCATAAGTTTAGCTGGGCC
TGGTGGTTCATGCCTTTATTCCTAGCTCTTTGGGGGAGGTCAAGGGAAGAGGACTACAGTTTAG
CAAGACACTGTCTCAAACTTCCGGGAATACAGCTCAGTGTGAAGGCCCTGAAGGGGTTCAATTC
TCAGTACCCAAACCAGCCAATCACCCAGCCAGCCAGCCAACCACCCAAGCAACCAGTTTATGTC
ATTCTTCAGTGATTGTATTTCATGGTAAAGTAAAACCTTGGTTTGTGAGTAGCTTACTCTGAAT
GTTTTGTAAGATGAGCAAACATTTCTAATAGTCTTTAACTGGATAAACAAATGATGTCTTATGA
TGAGTAGTATTGGTGTCAAATGTCACGTGATCACAACTGAGTCAATGGTTCCTCTCACCCTCCC
TCACTATGGGATTGTTTCCCACCAGCAAGAGGTTATGGAGCAGATCTCATCTGTACAAGAGGAG
TAAAAGGTGGAAGAATCCCTCACTTCAAATGAGATTAGGGAGATGTGTAAAATGTGAGAAACAG
GGCAAAATTTTGTAGAAAAGTATCATTCAAATAAGGCTATAGCAGTGTGAGCAATGAATCTGTT
TAACCATAATGTAGTGTCACATTTCCACAAAATCCTCAAAAGGAGGAGGCACAAGCAAGTGTCA
TTGGATAGGTTCCTTGTTAAAGTTGCACAGAAAGAGAAAGATTTCATGAGCCAATAAATAAGTT
AGTGAAAGTCGTTTTACACAATAACCCTCCTCTCTTGTCTCCCTCACACCAGCCACAAAGCTTT
TCACAGCTAAGTGTGGGTTAACTTAATTTTCTTTTAGTTTGTATTTTATTATTTTGCACTATAT
ATAGTATTGCATTTTATATGAATATTTTTGGGTTGTGGAATGAATCATGTGTTTCCATTATTTC
TTAGGGGGAAATTTGCTTTGATGTATAGGTGCTTTGGAGTATGAGCATGTTTCTGGAATGAATT
ATGCTCACAAACCAAGGTTTTATTGTGTACGGGCATAATATAATTTTGTCTCACATTAGGGGAC
CACTTAGCTTGTTTCAGGTTTTTGGCTTTTTAAATAAAGCTTGTGTTCATATATTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005402027	(Get FASTA)	NCBI Sequence Viewer
	XP_013358536	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005424
	ENSCLAP00000005424.1

RefSeq Acc Id:

XP_005402027 ⟸ XM_005401970

- UniProtKB:

A0A8C2UUF9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLSKLAHLQILAVLRRGVHSSVTCATSVATKKTVQGPPSSDYIFERESKYGAHNYHPLPVALER
GKGIYVWDVEGRKYFDFLSAYSAVSQGHCHPKIVNALKSQVDKLTLTSRAFYNDVLGEYEEYIT
KLFKYHKVLPMNTGVEAGETACKLARRWGYTVKGIQKYKAKIIFAAGNFWGRTLSAISSSTDPT
SYEGFGPFMPGFEIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLVGVRELCTRH
EVLFIADEIQTGLARTGKWLAVDHENVRPDIVLLGKALSGGLYPVSAVLCDDNIMLTIKPGEHG
STYGGNPLGCRVAVAALEVLDEENLAANAEKMGTILRNELMKLPSDVVTAVRGKGLLNAIVIRE
TRDYDAWKVCLRLRDNGLLAKPTHGHIIRLAPPLVIKEDEIQEAVEIINKTILSF

hide sequence

RefSeq Acc Id:

XP_013358536 ⟸ XM_013503082

- UniProtKB:

A0A8C2UUF9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLSKLAHLQILAVLRRGVHSSVTCATSVATKKTVQGPPSSDYIFERESKYGAHNYHPLPVALER
GKGIYVWDVEGRKYFDFLSAYSAVSQGHCHPKIVNALKSQVDKLTLTSRAFYNDVLGEYEEYIT
KLFKYHKVLPMNTGVEAGETACKLARRWGYTVKGIQKYKAKIIFAAGNFWGRTLSAISSSTDPT
SYEGFGPFMPGFEIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLVGVRELCTRH
EVLFIADEIQTGLARTGKWLAVDHENVRPDIVLLGKALSGGLYPVSAVLCDDNIMLTIKPGEHG
STYGGNPLGCRVAVAALEVLDEENLAANAEKMGTILRNELMKLPSDVVTAVRGKGLLNAIVIRE
TRDYDAWKVCLRLRDNGLLAKPTHGHIIRLAPPLVIKEDEIQEAVEIINKTILSF

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Ensembl Acc Id:

ENSCLAP00000005424 ⟸ ENSCLAT00000005521

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003848	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000005521	ENTREZGENE
	ENSCLAT00000005521.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.640.10	UniProtKB/TrEMBL
	3.90.1150.10	UniProtKB/TrEMBL
InterPro	Aminotrans_3	UniProtKB/TrEMBL
	Aminotrans_3_PPA_site	UniProtKB/TrEMBL
	Class-III_PLP-dep_AT	UniProtKB/TrEMBL
	Orn_aminotrans	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_major	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_small	UniProtKB/TrEMBL
NCBI Gene	Oat	ENTREZGENE
PANTHER	AMINOTRANSFERASE CLASS III	UniProtKB/TrEMBL
	ORNITHINE AMINOTRANSFERASE, MITOCHONDRIAL	UniProtKB/TrEMBL
Pfam	Aminotran_3	UniProtKB/TrEMBL
PIRSF	Transaminase_4ab_Lys_Orn	UniProtKB/TrEMBL
PROSITE	AA_TRANSFER_CLASS_3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53383	UniProtKB/TrEMBL
UniProt	A0A8C2UUF9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

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Imported Disease Annotations - OMIM

Imported Annotations - SMPDB